Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11869:12127
Extra
PDB:
ATOM 1 O3' U A1868 -20.208 18.425 93.017 1.00 56.35 O
ATOM 2 P U A1869 -21.334 17.953 94.056 1.00 49.26 P
ATOM 3 OP1 U A1869 -21.401 16.470 93.956 1.00 48.98 O
ATOM 4 OP2 U A1869 -22.566 18.766 93.792 1.00 49.74 O
ATOM 5 O5' U A1869 -20.734 18.351 95.463 1.00 49.39 O
ATOM 6 C5' U A1869 -21.146 17.647 96.608 1.00 49.54 C
ATOM 7 C4' U A1869 -20.044 17.499 97.588 1.00 49.36 C
ATOM 8 O4' U A1869 -19.019 16.646 97.037 1.00 48.83 O
ATOM 9 C3' U A1869 -19.367 18.784 97.977 1.00 49.50 C
ATOM 10 O3' U A1869 -19.107 18.741 99.375 1.00 49.67 O
ATOM 11 C2' U A1869 -18.049 18.761 97.187 1.00 49.02 C
ATOM 12 O2' U A1869 -16.987 19.430 97.822 1.00 48.99 O
ATOM 13 C1' U A1869 -17.764 17.283 97.090 1.00 48.63 C
ATOM 14 N1 U A1869 -17.018 16.865 95.897 1.00 48.16 N
ATOM 15 C2 U A1869 -15.823 16.181 96.117 1.00 47.76 C
ATOM 16 O2 U A1869 -15.337 16.029 97.240 1.00 47.79 O
ATOM 17 N3 U A1869 -15.164 15.703 95.006 1.00 47.33 N
ATOM 18 C4 U A1869 -15.623 15.832 93.724 1.00 47.28 C
ATOM 19 O4 U A1869 -14.941 15.348 92.831 1.00 46.90 O
ATOM 20 C5 U A1869 -16.869 16.535 93.573 1.00 47.71 C
ATOM 21 C6 U A1869 -17.528 16.999 94.636 1.00 48.13 C
ATOM 22 P C A1870 -20.138 19.411 100.385 1.00 54.38 P
ATOM 23 OP1 C A1870 -19.517 19.381 101.702 1.00 54.45 O
ATOM 24 OP2 C A1870 -21.442 18.741 100.201 1.00 54.56 O
ATOM 25 O5' C A1870 -20.224 20.903 99.847 1.00 54.62 O
TER
ATOM 1 O3' U B2126 -15.714 16.880 88.160 1.00 48.97 O
ATOM 2 P A B2127 -14.923 17.895 87.261 1.00 45.81 P
ATOM 3 OP1 A B2127 -15.758 18.187 86.070 1.00 45.97 O
ATOM 4 OP2 A B2127 -13.590 17.310 87.042 1.00 45.34 O
ATOM 5 O5' A B2127 -14.839 19.186 88.221 1.00 46.15 O
ATOM 6 C5' A B2127 -16.018 19.920 88.564 1.00 46.65 C
ATOM 7 C4' A B2127 -15.997 20.407 89.985 1.00 46.91 C
ATOM 8 O4' A B2127 -16.060 19.279 90.882 1.00 46.80 O
ATOM 9 C3' A B2127 -14.755 21.162 90.426 1.00 46.81 C
ATOM 10 O3' A B2127 -14.771 22.520 90.055 1.00 47.07 O
ATOM 11 C2' A B2127 -14.742 20.940 91.936 1.00 46.95 C
ATOM 12 O2' A B2127 -15.642 21.813 92.598 1.00 47.46 O
ATOM 13 C1' A B2127 -15.285 19.523 92.034 1.00 46.81 C
ATOM 14 N9 A B2127 -14.194 18.552 92.068 1.00 46.34 N
ATOM 15 C8 A B2127 -13.708 17.740 91.083 1.00 45.92 C
ATOM 16 N7 A B2127 -12.704 17.000 91.439 1.00 45.58 N
ATOM 17 C5 A B2127 -12.505 17.382 92.739 1.00 45.79 C
ATOM 18 C6 A B2127 -11.581 16.977 93.666 1.00 45.62 C
ATOM 19 N6 A B2127 -10.648 16.091 93.420 1.00 45.20 N
ATOM 20 N1 A B2127 -11.650 17.539 94.871 1.00 45.93 N
ATOM 21 C2 A B2127 -12.594 18.458 95.110 1.00 46.37 C
ATOM 22 N3 A B2127 -13.548 18.957 94.333 1.00 46.58 N
ATOM 23 C4 A B2127 -13.414 18.345 93.143 1.00 46.25 C
ATOM 24 P A B2128 -13.477 23.183 89.368 1.00 47.41 P
ATOM 25 OP1 A B2128 -13.795 24.627 89.142 1.00 47.80 O
ATOM 26 OP2 A B2128 -13.094 22.325 88.181 1.00 46.99 O
ATOM 27 O5' A B2128 -12.387 23.059 90.505 1.00 47.26 O
TER
ATOM 2 P U A1869 -21.334 17.953 94.056 1.00 49.26 P
ATOM 3 OP1 U A1869 -21.401 16.470 93.956 1.00 48.98 O
ATOM 4 OP2 U A1869 -22.566 18.766 93.792 1.00 49.74 O
ATOM 5 O5' U A1869 -20.734 18.351 95.463 1.00 49.39 O
ATOM 6 C5' U A1869 -21.146 17.647 96.608 1.00 49.54 C
ATOM 7 C4' U A1869 -20.044 17.499 97.588 1.00 49.36 C
ATOM 8 O4' U A1869 -19.019 16.646 97.037 1.00 48.83 O
ATOM 9 C3' U A1869 -19.367 18.784 97.977 1.00 49.50 C
ATOM 10 O3' U A1869 -19.107 18.741 99.375 1.00 49.67 O
ATOM 11 C2' U A1869 -18.049 18.761 97.187 1.00 49.02 C
ATOM 12 O2' U A1869 -16.987 19.430 97.822 1.00 48.99 O
ATOM 13 C1' U A1869 -17.764 17.283 97.090 1.00 48.63 C
ATOM 14 N1 U A1869 -17.018 16.865 95.897 1.00 48.16 N
ATOM 15 C2 U A1869 -15.823 16.181 96.117 1.00 47.76 C
ATOM 16 O2 U A1869 -15.337 16.029 97.240 1.00 47.79 O
ATOM 17 N3 U A1869 -15.164 15.703 95.006 1.00 47.33 N
ATOM 18 C4 U A1869 -15.623 15.832 93.724 1.00 47.28 C
ATOM 19 O4 U A1869 -14.941 15.348 92.831 1.00 46.90 O
ATOM 20 C5 U A1869 -16.869 16.535 93.573 1.00 47.71 C
ATOM 21 C6 U A1869 -17.528 16.999 94.636 1.00 48.13 C
ATOM 22 P C A1870 -20.138 19.411 100.385 1.00 54.38 P
ATOM 23 OP1 C A1870 -19.517 19.381 101.702 1.00 54.45 O
ATOM 24 OP2 C A1870 -21.442 18.741 100.201 1.00 54.56 O
ATOM 25 O5' C A1870 -20.224 20.903 99.847 1.00 54.62 O
TER
ATOM 1 O3' U B2126 -15.714 16.880 88.160 1.00 48.97 O
ATOM 2 P A B2127 -14.923 17.895 87.261 1.00 45.81 P
ATOM 3 OP1 A B2127 -15.758 18.187 86.070 1.00 45.97 O
ATOM 4 OP2 A B2127 -13.590 17.310 87.042 1.00 45.34 O
ATOM 5 O5' A B2127 -14.839 19.186 88.221 1.00 46.15 O
ATOM 6 C5' A B2127 -16.018 19.920 88.564 1.00 46.65 C
ATOM 7 C4' A B2127 -15.997 20.407 89.985 1.00 46.91 C
ATOM 8 O4' A B2127 -16.060 19.279 90.882 1.00 46.80 O
ATOM 9 C3' A B2127 -14.755 21.162 90.426 1.00 46.81 C
ATOM 10 O3' A B2127 -14.771 22.520 90.055 1.00 47.07 O
ATOM 11 C2' A B2127 -14.742 20.940 91.936 1.00 46.95 C
ATOM 12 O2' A B2127 -15.642 21.813 92.598 1.00 47.46 O
ATOM 13 C1' A B2127 -15.285 19.523 92.034 1.00 46.81 C
ATOM 14 N9 A B2127 -14.194 18.552 92.068 1.00 46.34 N
ATOM 15 C8 A B2127 -13.708 17.740 91.083 1.00 45.92 C
ATOM 16 N7 A B2127 -12.704 17.000 91.439 1.00 45.58 N
ATOM 17 C5 A B2127 -12.505 17.382 92.739 1.00 45.79 C
ATOM 18 C6 A B2127 -11.581 16.977 93.666 1.00 45.62 C
ATOM 19 N6 A B2127 -10.648 16.091 93.420 1.00 45.20 N
ATOM 20 N1 A B2127 -11.650 17.539 94.871 1.00 45.93 N
ATOM 21 C2 A B2127 -12.594 18.458 95.110 1.00 46.37 C
ATOM 22 N3 A B2127 -13.548 18.957 94.333 1.00 46.58 N
ATOM 23 C4 A B2127 -13.414 18.345 93.143 1.00 46.25 C
ATOM 24 P A B2128 -13.477 23.183 89.368 1.00 47.41 P
ATOM 25 OP1 A B2128 -13.795 24.627 89.142 1.00 47.80 O
ATOM 26 OP2 A B2128 -13.094 22.325 88.181 1.00 46.99 O
ATOM 27 O5' A B2128 -12.387 23.059 90.505 1.00 47.26 O
TER
Atoms:
C4: (-15.623,15.832,93.724)
N3: (-15.164,15.703,95.006)
OP1: (-21.401,16.470,93.956)
OP2: (-22.566,18.766,93.792)
C2: (-15.823,16.181,96.117)
C1': (-17.764,17.283,97.090)
C3': (-19.367,18.784,97.977)
O5': (-20.734,18.351,95.463)
O4': (-19.019,16.646,97.037)
C5': (-21.146,17.647,96.608)
P: (-21.334,17.953,94.056)
C4': (-20.044,17.499,97.588)
C2': (-18.049,18.761,97.187)
O2': (-16.987,19.430,97.822)
N1: (-17.018,16.865,95.897)
O4: (-14.941,15.348,92.831)
O2: (-15.337,16.029,97.240)
C6: (-17.528,16.999,94.636)
C5: (-16.869,16.535,93.573)
O3': (-19.107,18.741,99.375)
N3: (-15.164,15.703,95.006)
OP1: (-21.401,16.470,93.956)
OP2: (-22.566,18.766,93.792)
C2: (-15.823,16.181,96.117)
C1': (-17.764,17.283,97.090)
C3': (-19.367,18.784,97.977)
O5': (-20.734,18.351,95.463)
O4': (-19.019,16.646,97.037)
C5': (-21.146,17.647,96.608)
P: (-21.334,17.953,94.056)
C4': (-20.044,17.499,97.588)
C2': (-18.049,18.761,97.187)
O2': (-16.987,19.430,97.822)
N1: (-17.018,16.865,95.897)
O4: (-14.941,15.348,92.831)
O2: (-15.337,16.029,97.240)
C6: (-17.528,16.999,94.636)
C5: (-16.869,16.535,93.573)
O3': (-19.107,18.741,99.375)
OP1: (-15.758,18.187,86.070)
OP2: (-13.590,17.310,87.042)
C3': (-14.755,21.162,90.426)
C1': (-15.285,19.523,92.034)
C5': (-16.018,19.920,88.564)
O4': (-16.060,19.279,90.882)
C8: (-13.708,17.740,91.083)
O2': (-15.642,21.813,92.598)
C6: (-11.581,16.977,93.666)
C5: (-12.505,17.382,92.739)
C4: (-13.414,18.345,93.143)
P: (-14.923,17.895,87.261)
C4': (-15.997,20.407,89.985)
C2': (-14.742,20.940,91.936)
C2: (-12.594,18.458,95.110)
N1: (-11.650,17.539,94.871)
N3: (-13.548,18.957,94.333)
N6: (-10.648,16.091,93.420)
N7: (-12.704,17.000,91.439)
N9: (-14.194,18.552,92.068)
O5': (-14.839,19.186,88.221)
O3': (-14.771,22.520,90.055)
OP2: (-13.590,17.310,87.042)
C3': (-14.755,21.162,90.426)
C1': (-15.285,19.523,92.034)
C5': (-16.018,19.920,88.564)
O4': (-16.060,19.279,90.882)
C8: (-13.708,17.740,91.083)
O2': (-15.642,21.813,92.598)
C6: (-11.581,16.977,93.666)
C5: (-12.505,17.382,92.739)
C4: (-13.414,18.345,93.143)
P: (-14.923,17.895,87.261)
C4': (-15.997,20.407,89.985)
C2': (-14.742,20.940,91.936)
C2: (-12.594,18.458,95.110)
N1: (-11.650,17.539,94.871)
N3: (-13.548,18.957,94.333)
N6: (-10.648,16.091,93.420)
N7: (-12.704,17.000,91.439)
N9: (-14.194,18.552,92.068)
O5': (-14.839,19.186,88.221)
O3': (-14.771,22.520,90.055)
Image (generated by PyMOL):