ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02717:02718

Extra

PDB:
ATOM 1 O3' G A2716 108.411 205.529 110.467 1.00 84.07 O
ATOM 2 P U A2717 109.269 206.827 110.885 1.00 85.24 P
ATOM 3 OP1 U A2717 109.973 207.278 109.652 1.00 84.01 O
ATOM 4 OP2 U A2717 110.056 206.489 112.102 1.00 84.95 O
ATOM 5 O5' U A2717 108.161 207.910 111.277 1.00 86.71 O
ATOM 6 C5' U A2717 108.484 209.063 112.096 1.00 88.28 C
ATOM 7 C4' U A2717 107.865 210.320 111.511 1.00 89.19 C
ATOM 8 O4' U A2717 108.437 210.563 110.199 1.00 89.09 O
ATOM 9 C3' U A2717 106.360 210.274 111.279 1.00 89.94 C
ATOM 10 O3' U A2717 105.633 210.639 112.456 1.00 90.41 O
ATOM 11 C2' U A2717 106.167 211.271 110.139 1.00 89.51 C
ATOM 12 O2' U A2717 106.145 212.618 110.568 1.00 89.13 O
ATOM 13 C1' U A2717 107.433 211.033 109.313 1.00 89.21 C
ATOM 14 N1 U A2717 107.287 210.050 108.225 1.00 88.98 N
ATOM 15 C2 U A2717 106.706 210.467 107.030 1.00 89.34 C
ATOM 16 O2 U A2717 106.298 211.605 106.840 1.00 89.22 O
ATOM 17 N3 U A2717 106.623 209.495 106.063 1.00 89.27 N
ATOM 18 C4 U A2717 107.046 208.182 106.163 1.00 89.45 C
ATOM 19 O4 U A2717 106.893 207.422 105.206 1.00 90.07 O
ATOM 20 C5 U A2717 107.626 207.833 107.421 1.00 88.72 C
ATOM 21 C6 U A2717 107.722 208.751 108.382 1.00 88.22 C
ATOM 22 P A A2718 104.354 209.777 112.908 1.00 89.68 P
ATOM 23 OP1 A A2718 103.814 210.373 114.159 1.00 89.48 O
ATOM 24 OP2 A A2718 104.766 208.351 112.897 1.00 89.68 O
ATOM 25 O5' A A2718 103.289 210.023 111.746 1.00 89.28 O
TER

ATOM 1 O3' U B2717 105.633 210.639 112.456 1.00 90.41 O
ATOM 2 P A B2718 104.354 209.777 112.908 1.00 89.68 P
ATOM 3 OP1 A B2718 103.814 210.373 114.159 1.00 89.48 O
ATOM 4 OP2 A B2718 104.766 208.351 112.897 1.00 89.68 O
ATOM 5 O5' A B2718 103.289 210.023 111.746 1.00 89.28 O
ATOM 6 C5' A B2718 102.758 211.339 111.493 1.00 88.99 C
ATOM 7 C4' A B2718 102.244 211.432 110.076 1.00 89.96 C
ATOM 8 O4' A B2718 103.311 211.051 109.170 1.00 90.45 O
ATOM 9 C3' A B2718 101.106 210.492 109.705 1.00 91.05 C
ATOM 10 O3' A B2718 99.837 211.012 110.098 1.00 92.20 O
ATOM 11 C2' A B2718 101.247 210.393 108.189 1.00 90.63 C
ATOM 12 O2' A B2718 100.720 211.503 107.490 1.00 90.23 O
ATOM 13 C1' A B2718 102.767 210.398 108.033 1.00 89.54 C
ATOM 14 N9 A B2718 103.341 209.057 107.944 1.00 88.19 N
ATOM 15 C8 A B2718 103.989 208.334 108.917 1.00 87.70 C
ATOM 16 N7 A B2718 104.407 207.160 108.512 1.00 87.71 N
ATOM 17 C5 A B2718 104.006 207.103 107.184 1.00 88.20 C
ATOM 18 C6 A B2718 104.155 206.115 106.187 1.00 88.42 C
ATOM 19 N6 A B2718 104.785 204.951 106.381 1.00 87.77 N
ATOM 20 N1 A B2718 103.631 206.372 104.967 1.00 88.21 N
ATOM 21 C2 A B2718 103.006 207.544 104.771 1.00 88.19 C
ATOM 22 N3 A B2718 102.809 208.550 105.623 1.00 87.68 N
ATOM 23 C4 A B2718 103.340 208.262 106.825 1.00 87.95 C
ATOM 24 P A B2719 98.617 210.004 110.396 1.00 91.93 P
ATOM 25 OP1 A B2719 97.404 210.835 110.633 1.00 91.70 O
ATOM 26 OP2 A B2719 99.064 209.045 111.439 1.00 91.81 O
ATOM 27 O5' A B2719 98.418 209.212 109.027 1.00 89.72 O
TER

Atoms:
C4: (107.046,208.182,106.163)
N3: (106.623,209.495,106.063)
OP1: (109.973,207.278,109.652)
OP2: (110.056,206.489,112.102)
C2: (106.706,210.467,107.030)
C1': (107.433,211.033,109.313)
C3': (106.360,210.274,111.279)
O5': (108.161,207.910,111.277)
O4': (108.437,210.563,110.199)
C5': (108.484,209.063,112.096)
P: (109.269,206.827,110.885)
C4': (107.865,210.320,111.511)
C2': (106.167,211.271,110.139)
O2': (106.145,212.618,110.568)
N1: (107.287,210.050,108.225)
O4: (106.893,207.422,105.206)
O2: (106.298,211.605,106.840)
C6: (107.722,208.751,108.382)
C5: (107.626,207.833,107.421)
O3': (105.633,210.639,112.456)
OP1: (103.814,210.373,114.159)
OP2: (104.766,208.351,112.897)
C3': (101.106,210.492,109.705)
C1': (102.767,210.398,108.033)
C5': (102.758,211.339,111.493)
O4': (103.311,211.051,109.170)
C8: (103.989,208.334,108.917)
O2': (100.720,211.503,107.490)
C6: (104.155,206.115,106.187)
C5: (104.006,207.103,107.184)
C4: (103.340,208.262,106.825)
P: (104.354,209.777,112.908)
C4': (102.244,211.432,110.076)
C2': (101.247,210.393,108.189)
C2: (103.006,207.544,104.771)
N1: (103.631,206.372,104.967)
N3: (102.809,208.550,105.623)
N6: (104.785,204.951,106.381)
N7: (104.407,207.160,108.512)
N9: (103.341,209.057,107.944)
O5': (103.289,210.023,111.746)
O3': (99.837,211.012,110.098)
Image (generated by PyMOL):
PyMOL image
show in jmol