Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1729:A1964
Extra
PDB:
ATOM 1 O3' U A1728 120.036 141.926 102.839 1.00 56.86 O
ATOM 2 P U A1729 121.526 141.960 102.275 1.00 56.45 P
ATOM 3 OP1 U A1729 121.854 140.577 101.849 1.00 57.66 O
ATOM 4 OP2 U A1729 122.374 142.644 103.266 1.00 58.22 O
ATOM 5 O5' U A1729 121.447 142.864 100.974 1.00 57.20 O
ATOM 6 C5' U A1729 122.471 142.773 99.997 1.00 58.11 C
ATOM 7 C4' U A1729 121.904 143.040 98.641 1.00 60.55 C
ATOM 8 O4' U A1729 120.961 141.989 98.291 1.00 61.29 O
ATOM 9 C3' U A1729 121.147 144.358 98.501 1.00 62.07 C
ATOM 10 O3' U A1729 121.488 144.915 97.251 1.00 65.06 O
ATOM 11 C2' U A1729 119.679 143.933 98.561 1.00 61.00 C
ATOM 12 O2' U A1729 118.797 144.782 97.857 1.00 60.16 O
ATOM 13 C1' U A1729 119.734 142.575 97.874 1.00 60.68 C
ATOM 14 N1 U A1729 118.627 141.670 98.229 1.00 59.64 N
ATOM 15 C2 U A1729 117.854 141.164 97.197 1.00 58.46 C
ATOM 16 O2 U A1729 117.996 141.507 96.030 1.00 57.26 O
ATOM 17 N3 U A1729 116.898 140.254 97.584 1.00 57.61 N
ATOM 18 C4 U A1729 116.626 139.825 98.867 1.00 57.64 C
ATOM 19 O4 U A1729 115.889 138.856 99.032 1.00 56.73 O
ATOM 20 C5 U A1729 117.422 140.444 99.882 1.00 58.70 C
ATOM 21 C6 U A1729 118.376 141.318 99.539 1.00 59.60 C
ATOM 22 P C A1730 122.883 145.707 97.103 1.00 67.36 P
ATOM 23 OP1 C A1730 122.966 146.168 95.700 1.00 66.70 O
ATOM 24 OP2 C A1730 123.982 144.879 97.673 1.00 66.61 O
ATOM 25 O5' C A1730 122.716 146.970 98.051 1.00 66.61 O
TER
ATOM 1 O3' U B1963 114.186 138.659 104.400 1.00 59.62 O
ATOM 2 P A B1964 112.860 139.431 104.969 1.00 56.36 P
ATOM 3 OP1 A B1964 112.826 139.416 106.446 1.00 54.62 O
ATOM 4 OP2 A B1964 111.657 138.985 104.215 1.00 58.76 O
ATOM 5 O5' A B1964 113.095 140.950 104.555 1.00 55.35 O
ATOM 6 C5' A B1964 114.211 141.706 105.068 1.00 52.73 C
ATOM 7 C4' A B1964 114.682 142.710 104.037 1.00 48.92 C
ATOM 8 O4' A B1964 115.317 142.030 102.918 1.00 48.91 O
ATOM 9 C3' A B1964 113.606 143.563 103.394 1.00 47.96 C
ATOM 10 O3' A B1964 113.233 144.668 104.190 1.00 47.67 O
ATOM 11 C2' A B1964 114.257 144.000 102.091 1.00 48.22 C
ATOM 12 O2' A B1964 115.064 145.149 102.262 1.00 46.63 O
ATOM 13 C1' A B1964 115.087 142.765 101.725 1.00 48.68 C
ATOM 14 N9 A B1964 114.365 141.917 100.774 1.00 49.23 N
ATOM 15 C8 A B1964 113.659 140.768 101.031 1.00 50.09 C
ATOM 16 N7 A B1964 113.070 140.263 99.978 1.00 50.77 N
ATOM 17 C5 A B1964 113.413 141.131 98.957 1.00 50.92 C
ATOM 18 C6 A B1964 113.085 141.148 97.590 1.00 52.12 C
ATOM 19 N6 A B1964 112.288 140.240 97.009 1.00 52.58 N
ATOM 20 N1 A B1964 113.600 142.139 96.833 1.00 51.35 N
ATOM 21 C2 A B1964 114.383 143.046 97.426 1.00 50.61 C
ATOM 22 N3 A B1964 114.754 143.141 98.706 1.00 49.78 N
ATOM 23 C4 A B1964 114.226 142.143 99.427 1.00 49.88 C
ATOM 24 P A B1965 111.713 145.203 104.137 1.00 48.31 P
ATOM 25 OP1 A B1965 111.562 146.472 104.894 1.00 49.21 O
ATOM 26 OP2 A B1965 110.871 144.039 104.496 1.00 48.45 O
ATOM 27 O5' A B1965 111.498 145.592 102.608 1.00 46.96 O
TER
ATOM 2 P U A1729 121.526 141.960 102.275 1.00 56.45 P
ATOM 3 OP1 U A1729 121.854 140.577 101.849 1.00 57.66 O
ATOM 4 OP2 U A1729 122.374 142.644 103.266 1.00 58.22 O
ATOM 5 O5' U A1729 121.447 142.864 100.974 1.00 57.20 O
ATOM 6 C5' U A1729 122.471 142.773 99.997 1.00 58.11 C
ATOM 7 C4' U A1729 121.904 143.040 98.641 1.00 60.55 C
ATOM 8 O4' U A1729 120.961 141.989 98.291 1.00 61.29 O
ATOM 9 C3' U A1729 121.147 144.358 98.501 1.00 62.07 C
ATOM 10 O3' U A1729 121.488 144.915 97.251 1.00 65.06 O
ATOM 11 C2' U A1729 119.679 143.933 98.561 1.00 61.00 C
ATOM 12 O2' U A1729 118.797 144.782 97.857 1.00 60.16 O
ATOM 13 C1' U A1729 119.734 142.575 97.874 1.00 60.68 C
ATOM 14 N1 U A1729 118.627 141.670 98.229 1.00 59.64 N
ATOM 15 C2 U A1729 117.854 141.164 97.197 1.00 58.46 C
ATOM 16 O2 U A1729 117.996 141.507 96.030 1.00 57.26 O
ATOM 17 N3 U A1729 116.898 140.254 97.584 1.00 57.61 N
ATOM 18 C4 U A1729 116.626 139.825 98.867 1.00 57.64 C
ATOM 19 O4 U A1729 115.889 138.856 99.032 1.00 56.73 O
ATOM 20 C5 U A1729 117.422 140.444 99.882 1.00 58.70 C
ATOM 21 C6 U A1729 118.376 141.318 99.539 1.00 59.60 C
ATOM 22 P C A1730 122.883 145.707 97.103 1.00 67.36 P
ATOM 23 OP1 C A1730 122.966 146.168 95.700 1.00 66.70 O
ATOM 24 OP2 C A1730 123.982 144.879 97.673 1.00 66.61 O
ATOM 25 O5' C A1730 122.716 146.970 98.051 1.00 66.61 O
TER
ATOM 1 O3' U B1963 114.186 138.659 104.400 1.00 59.62 O
ATOM 2 P A B1964 112.860 139.431 104.969 1.00 56.36 P
ATOM 3 OP1 A B1964 112.826 139.416 106.446 1.00 54.62 O
ATOM 4 OP2 A B1964 111.657 138.985 104.215 1.00 58.76 O
ATOM 5 O5' A B1964 113.095 140.950 104.555 1.00 55.35 O
ATOM 6 C5' A B1964 114.211 141.706 105.068 1.00 52.73 C
ATOM 7 C4' A B1964 114.682 142.710 104.037 1.00 48.92 C
ATOM 8 O4' A B1964 115.317 142.030 102.918 1.00 48.91 O
ATOM 9 C3' A B1964 113.606 143.563 103.394 1.00 47.96 C
ATOM 10 O3' A B1964 113.233 144.668 104.190 1.00 47.67 O
ATOM 11 C2' A B1964 114.257 144.000 102.091 1.00 48.22 C
ATOM 12 O2' A B1964 115.064 145.149 102.262 1.00 46.63 O
ATOM 13 C1' A B1964 115.087 142.765 101.725 1.00 48.68 C
ATOM 14 N9 A B1964 114.365 141.917 100.774 1.00 49.23 N
ATOM 15 C8 A B1964 113.659 140.768 101.031 1.00 50.09 C
ATOM 16 N7 A B1964 113.070 140.263 99.978 1.00 50.77 N
ATOM 17 C5 A B1964 113.413 141.131 98.957 1.00 50.92 C
ATOM 18 C6 A B1964 113.085 141.148 97.590 1.00 52.12 C
ATOM 19 N6 A B1964 112.288 140.240 97.009 1.00 52.58 N
ATOM 20 N1 A B1964 113.600 142.139 96.833 1.00 51.35 N
ATOM 21 C2 A B1964 114.383 143.046 97.426 1.00 50.61 C
ATOM 22 N3 A B1964 114.754 143.141 98.706 1.00 49.78 N
ATOM 23 C4 A B1964 114.226 142.143 99.427 1.00 49.88 C
ATOM 24 P A B1965 111.713 145.203 104.137 1.00 48.31 P
ATOM 25 OP1 A B1965 111.562 146.472 104.894 1.00 49.21 O
ATOM 26 OP2 A B1965 110.871 144.039 104.496 1.00 48.45 O
ATOM 27 O5' A B1965 111.498 145.592 102.608 1.00 46.96 O
TER
Atoms:
C4: (116.626,139.825,98.867)
N3: (116.898,140.254,97.584)
OP1: (121.854,140.577,101.849)
OP2: (122.374,142.644,103.266)
C2: (117.854,141.164,97.197)
C1': (119.734,142.575,97.874)
C3': (121.147,144.358,98.501)
O5': (121.447,142.864,100.974)
O4': (120.961,141.989,98.291)
C5': (122.471,142.773,99.997)
P: (121.526,141.960,102.275)
C4': (121.904,143.040,98.641)
C2': (119.679,143.933,98.561)
O2': (118.797,144.782,97.857)
N1: (118.627,141.670,98.229)
O4: (115.889,138.856,99.032)
O2: (117.996,141.507,96.030)
C6: (118.376,141.318,99.539)
C5: (117.422,140.444,99.882)
O3': (121.488,144.915,97.251)
N3: (116.898,140.254,97.584)
OP1: (121.854,140.577,101.849)
OP2: (122.374,142.644,103.266)
C2: (117.854,141.164,97.197)
C1': (119.734,142.575,97.874)
C3': (121.147,144.358,98.501)
O5': (121.447,142.864,100.974)
O4': (120.961,141.989,98.291)
C5': (122.471,142.773,99.997)
P: (121.526,141.960,102.275)
C4': (121.904,143.040,98.641)
C2': (119.679,143.933,98.561)
O2': (118.797,144.782,97.857)
N1: (118.627,141.670,98.229)
O4: (115.889,138.856,99.032)
O2: (117.996,141.507,96.030)
C6: (118.376,141.318,99.539)
C5: (117.422,140.444,99.882)
O3': (121.488,144.915,97.251)
OP1: (112.826,139.416,106.446)
OP2: (111.657,138.985,104.215)
C3': (113.606,143.563,103.394)
C1': (115.087,142.765,101.725)
C5': (114.211,141.706,105.068)
O4': (115.317,142.030,102.918)
C8: (113.659,140.768,101.031)
O2': (115.064,145.149,102.262)
C6: (113.085,141.148,97.590)
C5: (113.413,141.131,98.957)
C4: (114.226,142.143,99.427)
P: (112.860,139.431,104.969)
C4': (114.682,142.710,104.037)
C2': (114.257,144.000,102.091)
C2: (114.383,143.046,97.426)
N1: (113.600,142.139,96.833)
N3: (114.754,143.141,98.706)
N6: (112.288,140.240,97.009)
N7: (113.070,140.263,99.978)
N9: (114.365,141.917,100.774)
O5': (113.095,140.950,104.555)
O3': (113.233,144.668,104.190)
OP2: (111.657,138.985,104.215)
C3': (113.606,143.563,103.394)
C1': (115.087,142.765,101.725)
C5': (114.211,141.706,105.068)
O4': (115.317,142.030,102.918)
C8: (113.659,140.768,101.031)
O2': (115.064,145.149,102.262)
C6: (113.085,141.148,97.590)
C5: (113.413,141.131,98.957)
C4: (114.226,142.143,99.427)
P: (112.860,139.431,104.969)
C4': (114.682,142.710,104.037)
C2': (114.257,144.000,102.091)
C2: (114.383,143.046,97.426)
N1: (113.600,142.139,96.833)
N3: (114.754,143.141,98.706)
N6: (112.288,140.240,97.009)
N7: (113.070,140.263,99.978)
N9: (114.365,141.917,100.774)
O5': (113.095,140.950,104.555)
O3': (113.233,144.668,104.190)
Image (generated by PyMOL):