Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0547:0548
Extra
PDB:
ATOM 1 O3' C A 546 -8.933 117.260 102.750 1.00 82.03 O
ATOM 2 P U A 547 -9.309 115.713 103.009 1.00 83.61 P
ATOM 3 OP1 U A 547 -8.455 115.229 104.119 1.00 83.61 O
ATOM 4 OP2 U A 547 -9.301 114.988 101.714 1.00 82.63 O
ATOM 5 O5' U A 547 -10.823 115.759 103.512 1.00 84.27 O
ATOM 6 C5' U A 547 -11.818 116.471 102.757 1.00 83.85 C
ATOM 7 C4' U A 547 -13.215 116.151 103.236 1.00 83.98 C
ATOM 8 O4' U A 547 -14.147 116.873 102.382 1.00 84.63 O
ATOM 9 C3' U A 547 -13.620 114.684 103.140 1.00 83.61 C
ATOM 10 O3' U A 547 -13.427 114.008 104.380 1.00 81.27 O
ATOM 11 C2' U A 547 -15.081 114.750 102.712 1.00 83.82 C
ATOM 12 O2' U A 547 -15.958 114.998 103.790 1.00 83.05 O
ATOM 13 C1' U A 547 -15.056 115.967 101.787 1.00 84.88 C
ATOM 14 N1 U A 547 -14.589 115.677 100.420 1.00 85.96 N
ATOM 15 C2 U A 547 -15.541 115.460 99.440 1.00 87.49 C
ATOM 16 O2 U A 547 -16.742 115.520 99.647 1.00 88.56 O
ATOM 17 N3 U A 547 -15.034 115.175 98.197 1.00 88.93 N
ATOM 18 C4 U A 547 -13.703 115.097 97.839 1.00 89.15 C
ATOM 19 O4 U A 547 -13.402 114.793 96.682 1.00 90.20 O
ATOM 20 C5 U A 547 -12.787 115.350 98.901 1.00 88.52 C
ATOM 21 C6 U A 547 -13.247 115.621 100.120 1.00 86.77 C
ATOM 22 P U A 548 -13.121 112.434 104.396 1.00 80.57 P
ATOM 23 OP1 U A 548 -13.216 112.003 105.811 1.00 79.52 O
ATOM 24 OP2 U A 548 -11.866 112.186 103.638 1.00 81.13 O
ATOM 25 O5' U A 548 -14.324 111.793 103.568 1.00 78.78 O
TER
ATOM 1 O3' U B 547 -13.427 114.008 104.380 1.00 81.27 O
ATOM 2 P U B 548 -13.121 112.434 104.396 1.00 80.57 P
ATOM 3 OP1 U B 548 -13.216 112.003 105.811 1.00 79.52 O
ATOM 4 OP2 U B 548 -11.866 112.186 103.638 1.00 81.13 O
ATOM 5 O5' U B 548 -14.324 111.793 103.568 1.00 78.78 O
ATOM 6 C5' U B 548 -15.666 111.788 104.088 1.00 76.87 C
ATOM 7 C4' U B 548 -16.644 111.332 103.034 1.00 75.57 C
ATOM 8 O4' U B 548 -16.646 112.268 101.929 1.00 75.39 O
ATOM 9 C3' U B 548 -16.351 109.990 102.384 1.00 73.99 C
ATOM 10 O3' U B 548 -16.789 108.893 103.160 1.00 71.89 O
ATOM 11 C2' U B 548 -17.120 110.087 101.082 1.00 74.33 C
ATOM 12 O2' U B 548 -18.497 109.815 101.226 1.00 73.71 O
ATOM 13 C1' U B 548 -16.894 111.561 100.720 1.00 75.85 C
ATOM 14 N1 U B 548 -15.723 111.707 99.844 1.00 77.64 N
ATOM 15 C2 U B 548 -15.897 111.542 98.480 1.00 78.52 C
ATOM 16 O2 U B 548 -16.982 111.355 97.964 1.00 77.52 O
ATOM 17 N3 U B 548 -14.737 111.596 97.745 1.00 79.59 N
ATOM 18 C4 U B 548 -13.450 111.820 98.217 1.00 78.60 C
ATOM 19 O4 U B 548 -12.502 111.751 97.438 1.00 78.49 O
ATOM 20 C5 U B 548 -13.362 112.035 99.622 1.00 78.53 C
ATOM 21 C6 U B 548 -14.474 111.981 100.369 1.00 78.18 C
ATOM 22 P G B 549 -16.073 107.467 102.979 1.00 71.80 P
ATOM 23 OP1 G B 549 -16.676 106.523 103.954 1.00 71.31 O
ATOM 24 OP2 G B 549 -14.604 107.685 102.983 1.00 70.80 O
ATOM 25 O5' G B 549 -16.496 107.015 101.513 1.00 69.06 O
TER
ATOM 2 P U A 547 -9.309 115.713 103.009 1.00 83.61 P
ATOM 3 OP1 U A 547 -8.455 115.229 104.119 1.00 83.61 O
ATOM 4 OP2 U A 547 -9.301 114.988 101.714 1.00 82.63 O
ATOM 5 O5' U A 547 -10.823 115.759 103.512 1.00 84.27 O
ATOM 6 C5' U A 547 -11.818 116.471 102.757 1.00 83.85 C
ATOM 7 C4' U A 547 -13.215 116.151 103.236 1.00 83.98 C
ATOM 8 O4' U A 547 -14.147 116.873 102.382 1.00 84.63 O
ATOM 9 C3' U A 547 -13.620 114.684 103.140 1.00 83.61 C
ATOM 10 O3' U A 547 -13.427 114.008 104.380 1.00 81.27 O
ATOM 11 C2' U A 547 -15.081 114.750 102.712 1.00 83.82 C
ATOM 12 O2' U A 547 -15.958 114.998 103.790 1.00 83.05 O
ATOM 13 C1' U A 547 -15.056 115.967 101.787 1.00 84.88 C
ATOM 14 N1 U A 547 -14.589 115.677 100.420 1.00 85.96 N
ATOM 15 C2 U A 547 -15.541 115.460 99.440 1.00 87.49 C
ATOM 16 O2 U A 547 -16.742 115.520 99.647 1.00 88.56 O
ATOM 17 N3 U A 547 -15.034 115.175 98.197 1.00 88.93 N
ATOM 18 C4 U A 547 -13.703 115.097 97.839 1.00 89.15 C
ATOM 19 O4 U A 547 -13.402 114.793 96.682 1.00 90.20 O
ATOM 20 C5 U A 547 -12.787 115.350 98.901 1.00 88.52 C
ATOM 21 C6 U A 547 -13.247 115.621 100.120 1.00 86.77 C
ATOM 22 P U A 548 -13.121 112.434 104.396 1.00 80.57 P
ATOM 23 OP1 U A 548 -13.216 112.003 105.811 1.00 79.52 O
ATOM 24 OP2 U A 548 -11.866 112.186 103.638 1.00 81.13 O
ATOM 25 O5' U A 548 -14.324 111.793 103.568 1.00 78.78 O
TER
ATOM 1 O3' U B 547 -13.427 114.008 104.380 1.00 81.27 O
ATOM 2 P U B 548 -13.121 112.434 104.396 1.00 80.57 P
ATOM 3 OP1 U B 548 -13.216 112.003 105.811 1.00 79.52 O
ATOM 4 OP2 U B 548 -11.866 112.186 103.638 1.00 81.13 O
ATOM 5 O5' U B 548 -14.324 111.793 103.568 1.00 78.78 O
ATOM 6 C5' U B 548 -15.666 111.788 104.088 1.00 76.87 C
ATOM 7 C4' U B 548 -16.644 111.332 103.034 1.00 75.57 C
ATOM 8 O4' U B 548 -16.646 112.268 101.929 1.00 75.39 O
ATOM 9 C3' U B 548 -16.351 109.990 102.384 1.00 73.99 C
ATOM 10 O3' U B 548 -16.789 108.893 103.160 1.00 71.89 O
ATOM 11 C2' U B 548 -17.120 110.087 101.082 1.00 74.33 C
ATOM 12 O2' U B 548 -18.497 109.815 101.226 1.00 73.71 O
ATOM 13 C1' U B 548 -16.894 111.561 100.720 1.00 75.85 C
ATOM 14 N1 U B 548 -15.723 111.707 99.844 1.00 77.64 N
ATOM 15 C2 U B 548 -15.897 111.542 98.480 1.00 78.52 C
ATOM 16 O2 U B 548 -16.982 111.355 97.964 1.00 77.52 O
ATOM 17 N3 U B 548 -14.737 111.596 97.745 1.00 79.59 N
ATOM 18 C4 U B 548 -13.450 111.820 98.217 1.00 78.60 C
ATOM 19 O4 U B 548 -12.502 111.751 97.438 1.00 78.49 O
ATOM 20 C5 U B 548 -13.362 112.035 99.622 1.00 78.53 C
ATOM 21 C6 U B 548 -14.474 111.981 100.369 1.00 78.18 C
ATOM 22 P G B 549 -16.073 107.467 102.979 1.00 71.80 P
ATOM 23 OP1 G B 549 -16.676 106.523 103.954 1.00 71.31 O
ATOM 24 OP2 G B 549 -14.604 107.685 102.983 1.00 70.80 O
ATOM 25 O5' G B 549 -16.496 107.015 101.513 1.00 69.06 O
TER
Atoms:
C4: (-13.703,115.097,97.839)
N3: (-15.034,115.175,98.197)
OP1: (-8.455,115.229,104.119)
OP2: (-9.301,114.988,101.714)
C2: (-15.541,115.460,99.440)
C1': (-15.056,115.967,101.787)
C3': (-13.620,114.684,103.140)
O5': (-10.823,115.759,103.512)
O4': (-14.147,116.873,102.382)
C5': (-11.818,116.471,102.757)
P: (-9.309,115.713,103.009)
C4': (-13.215,116.151,103.236)
C2': (-15.081,114.750,102.712)
O2': (-15.958,114.998,103.790)
N1: (-14.589,115.677,100.420)
O4: (-13.402,114.793,96.682)
O2: (-16.742,115.520,99.647)
C6: (-13.247,115.621,100.120)
C5: (-12.787,115.350,98.901)
O3': (-13.427,114.008,104.380)
N3: (-15.034,115.175,98.197)
OP1: (-8.455,115.229,104.119)
OP2: (-9.301,114.988,101.714)
C2: (-15.541,115.460,99.440)
C1': (-15.056,115.967,101.787)
C3': (-13.620,114.684,103.140)
O5': (-10.823,115.759,103.512)
O4': (-14.147,116.873,102.382)
C5': (-11.818,116.471,102.757)
P: (-9.309,115.713,103.009)
C4': (-13.215,116.151,103.236)
C2': (-15.081,114.750,102.712)
O2': (-15.958,114.998,103.790)
N1: (-14.589,115.677,100.420)
O4: (-13.402,114.793,96.682)
O2: (-16.742,115.520,99.647)
C6: (-13.247,115.621,100.120)
C5: (-12.787,115.350,98.901)
O3': (-13.427,114.008,104.380)
C4: (-13.450,111.820,98.217)
N3: (-14.737,111.596,97.745)
OP1: (-13.216,112.003,105.811)
OP2: (-11.866,112.186,103.638)
C2: (-15.897,111.542,98.480)
C1': (-16.894,111.561,100.720)
C3': (-16.351,109.990,102.384)
O5': (-14.324,111.793,103.568)
O4': (-16.646,112.268,101.929)
C5': (-15.666,111.788,104.088)
P: (-13.121,112.434,104.396)
C4': (-16.644,111.332,103.034)
C2': (-17.120,110.087,101.082)
O2': (-18.497,109.815,101.226)
N1: (-15.723,111.707,99.844)
O4: (-12.502,111.751,97.438)
O2: (-16.982,111.355,97.964)
C6: (-14.474,111.981,100.369)
C5: (-13.362,112.035,99.622)
O3': (-16.789,108.893,103.160)
N3: (-14.737,111.596,97.745)
OP1: (-13.216,112.003,105.811)
OP2: (-11.866,112.186,103.638)
C2: (-15.897,111.542,98.480)
C1': (-16.894,111.561,100.720)
C3': (-16.351,109.990,102.384)
O5': (-14.324,111.793,103.568)
O4': (-16.646,112.268,101.929)
C5': (-15.666,111.788,104.088)
P: (-13.121,112.434,104.396)
C4': (-16.644,111.332,103.034)
C2': (-17.120,110.087,101.082)
O2': (-18.497,109.815,101.226)
N1: (-15.723,111.707,99.844)
O4: (-12.502,111.751,97.438)
O2: (-16.982,111.355,97.964)
C6: (-14.474,111.981,100.369)
C5: (-13.362,112.035,99.622)
O3': (-16.789,108.893,103.160)
Image (generated by PyMOL):