Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01000:01001
Extra
PDB:
ATOM 1 O3' A A 999 44.769 96.884 72.101 1.00 29.10 O
ATOM 2 P U A1000 46.187 97.311 72.707 1.00 28.75 P
ATOM 3 OP1 U A1000 46.491 98.628 72.115 1.00 30.66 O
ATOM 4 OP2 U A1000 47.145 96.179 72.545 1.00 24.03 O
ATOM 5 O5' U A1000 45.913 97.534 74.259 1.00 26.28 O
ATOM 6 C5' U A1000 44.901 98.439 74.708 1.00 23.47 C
ATOM 7 C4' U A1000 44.336 97.967 76.030 1.00 27.44 C
ATOM 8 O4' U A1000 43.674 96.679 75.851 1.00 27.50 O
ATOM 9 C3' U A1000 45.337 97.697 77.147 1.00 26.31 C
ATOM 10 O3' U A1000 45.745 98.892 77.809 1.00 28.09 O
ATOM 11 C2' U A1000 44.526 96.789 78.064 1.00 26.08 C
ATOM 12 O2' U A1000 43.554 97.496 78.807 1.00 23.40 O
ATOM 13 C1' U A1000 43.804 95.909 77.041 1.00 26.08 C
ATOM 14 N1 U A1000 44.585 94.697 76.744 1.00 26.46 N
ATOM 15 C2 U A1000 44.589 93.683 77.694 1.00 26.14 C
ATOM 16 O2 U A1000 43.931 93.727 78.714 1.00 29.53 O
ATOM 17 N3 U A1000 45.390 92.613 77.399 1.00 25.10 N
ATOM 18 C4 U A1000 46.159 92.439 76.274 1.00 26.90 C
ATOM 19 O4 U A1000 46.868 91.439 76.178 1.00 28.24 O
ATOM 20 C5 U A1000 46.075 93.506 75.321 1.00 27.62 C
ATOM 21 C6 U A1000 45.310 94.572 75.582 1.00 25.78 C
ATOM 22 P U A1001 47.257 99.042 78.351 1.00 26.78 P
ATOM 23 OP1 U A1001 47.259 100.250 79.207 1.00 25.90 O
ATOM 24 OP2 U A1001 48.189 98.949 77.205 1.00 27.36 O
ATOM 25 O5' U A1001 47.491 97.766 79.276 1.00 27.57 O
TER
ATOM 1 O3' U B1000 45.745 98.892 77.809 1.00 28.09 O
ATOM 2 P U B1001 47.257 99.042 78.351 1.00 26.78 P
ATOM 3 OP1 U B1001 47.259 100.250 79.207 1.00 25.90 O
ATOM 4 OP2 U B1001 48.189 98.949 77.205 1.00 27.36 O
ATOM 5 O5' U B1001 47.491 97.766 79.276 1.00 27.57 O
ATOM 6 C5' U B1001 46.750 97.582 80.497 1.00 27.29 C
ATOM 7 C4' U B1001 47.098 96.253 81.125 1.00 27.06 C
ATOM 8 O4' U B1001 46.749 95.170 80.224 1.00 28.93 O
ATOM 9 C3' U B1001 48.574 96.041 81.390 1.00 26.29 C
ATOM 10 O3' U B1001 48.964 96.649 82.604 1.00 25.80 O
ATOM 11 C2' U B1001 48.686 94.528 81.447 1.00 25.48 C
ATOM 12 O2' U B1001 48.275 94.023 82.699 1.00 27.72 O
ATOM 13 C1' U B1001 47.698 94.117 80.353 1.00 25.42 C
ATOM 14 N1 U B1001 48.344 93.904 79.049 1.00 24.46 N
ATOM 15 C2 U B1001 49.031 92.720 78.857 1.00 24.73 C
ATOM 16 O2 U B1001 49.124 91.867 79.713 1.00 28.18 O
ATOM 17 N3 U B1001 49.613 92.577 77.624 1.00 25.03 N
ATOM 18 C4 U B1001 49.585 93.484 76.583 1.00 25.46 C
ATOM 19 O4 U B1001 50.140 93.203 75.518 1.00 27.78 O
ATOM 20 C5 U B1001 48.859 94.686 76.860 1.00 22.94 C
ATOM 21 C6 U B1001 48.275 94.850 78.048 1.00 21.98 C
ATOM 22 P C B1002 50.456 97.203 82.761 1.00 28.25 P
ATOM 23 OP1 C B1002 50.493 97.951 84.043 1.00 26.75 O
ATOM 24 OP2 C B1002 50.866 97.870 81.501 1.00 27.47 O
ATOM 25 O5' C B1002 51.346 95.894 82.889 1.00 25.71 O
TER
ATOM 2 P U A1000 46.187 97.311 72.707 1.00 28.75 P
ATOM 3 OP1 U A1000 46.491 98.628 72.115 1.00 30.66 O
ATOM 4 OP2 U A1000 47.145 96.179 72.545 1.00 24.03 O
ATOM 5 O5' U A1000 45.913 97.534 74.259 1.00 26.28 O
ATOM 6 C5' U A1000 44.901 98.439 74.708 1.00 23.47 C
ATOM 7 C4' U A1000 44.336 97.967 76.030 1.00 27.44 C
ATOM 8 O4' U A1000 43.674 96.679 75.851 1.00 27.50 O
ATOM 9 C3' U A1000 45.337 97.697 77.147 1.00 26.31 C
ATOM 10 O3' U A1000 45.745 98.892 77.809 1.00 28.09 O
ATOM 11 C2' U A1000 44.526 96.789 78.064 1.00 26.08 C
ATOM 12 O2' U A1000 43.554 97.496 78.807 1.00 23.40 O
ATOM 13 C1' U A1000 43.804 95.909 77.041 1.00 26.08 C
ATOM 14 N1 U A1000 44.585 94.697 76.744 1.00 26.46 N
ATOM 15 C2 U A1000 44.589 93.683 77.694 1.00 26.14 C
ATOM 16 O2 U A1000 43.931 93.727 78.714 1.00 29.53 O
ATOM 17 N3 U A1000 45.390 92.613 77.399 1.00 25.10 N
ATOM 18 C4 U A1000 46.159 92.439 76.274 1.00 26.90 C
ATOM 19 O4 U A1000 46.868 91.439 76.178 1.00 28.24 O
ATOM 20 C5 U A1000 46.075 93.506 75.321 1.00 27.62 C
ATOM 21 C6 U A1000 45.310 94.572 75.582 1.00 25.78 C
ATOM 22 P U A1001 47.257 99.042 78.351 1.00 26.78 P
ATOM 23 OP1 U A1001 47.259 100.250 79.207 1.00 25.90 O
ATOM 24 OP2 U A1001 48.189 98.949 77.205 1.00 27.36 O
ATOM 25 O5' U A1001 47.491 97.766 79.276 1.00 27.57 O
TER
ATOM 1 O3' U B1000 45.745 98.892 77.809 1.00 28.09 O
ATOM 2 P U B1001 47.257 99.042 78.351 1.00 26.78 P
ATOM 3 OP1 U B1001 47.259 100.250 79.207 1.00 25.90 O
ATOM 4 OP2 U B1001 48.189 98.949 77.205 1.00 27.36 O
ATOM 5 O5' U B1001 47.491 97.766 79.276 1.00 27.57 O
ATOM 6 C5' U B1001 46.750 97.582 80.497 1.00 27.29 C
ATOM 7 C4' U B1001 47.098 96.253 81.125 1.00 27.06 C
ATOM 8 O4' U B1001 46.749 95.170 80.224 1.00 28.93 O
ATOM 9 C3' U B1001 48.574 96.041 81.390 1.00 26.29 C
ATOM 10 O3' U B1001 48.964 96.649 82.604 1.00 25.80 O
ATOM 11 C2' U B1001 48.686 94.528 81.447 1.00 25.48 C
ATOM 12 O2' U B1001 48.275 94.023 82.699 1.00 27.72 O
ATOM 13 C1' U B1001 47.698 94.117 80.353 1.00 25.42 C
ATOM 14 N1 U B1001 48.344 93.904 79.049 1.00 24.46 N
ATOM 15 C2 U B1001 49.031 92.720 78.857 1.00 24.73 C
ATOM 16 O2 U B1001 49.124 91.867 79.713 1.00 28.18 O
ATOM 17 N3 U B1001 49.613 92.577 77.624 1.00 25.03 N
ATOM 18 C4 U B1001 49.585 93.484 76.583 1.00 25.46 C
ATOM 19 O4 U B1001 50.140 93.203 75.518 1.00 27.78 O
ATOM 20 C5 U B1001 48.859 94.686 76.860 1.00 22.94 C
ATOM 21 C6 U B1001 48.275 94.850 78.048 1.00 21.98 C
ATOM 22 P C B1002 50.456 97.203 82.761 1.00 28.25 P
ATOM 23 OP1 C B1002 50.493 97.951 84.043 1.00 26.75 O
ATOM 24 OP2 C B1002 50.866 97.870 81.501 1.00 27.47 O
ATOM 25 O5' C B1002 51.346 95.894 82.889 1.00 25.71 O
TER
Atoms:
C4: (46.159,92.439,76.274)
N3: (45.390,92.613,77.399)
OP1: (46.491,98.628,72.115)
OP2: (47.145,96.179,72.545)
C2: (44.589,93.683,77.694)
C1': (43.804,95.909,77.041)
C3': (45.337,97.697,77.147)
O5': (45.913,97.534,74.259)
O4': (43.674,96.679,75.851)
C5': (44.901,98.439,74.708)
P: (46.187,97.311,72.707)
C4': (44.336,97.967,76.030)
C2': (44.526,96.789,78.064)
O2': (43.554,97.496,78.807)
N1: (44.585,94.697,76.744)
O4: (46.868,91.439,76.178)
O2: (43.931,93.727,78.714)
C6: (45.310,94.572,75.582)
C5: (46.075,93.506,75.321)
O3': (45.745,98.892,77.809)
N3: (45.390,92.613,77.399)
OP1: (46.491,98.628,72.115)
OP2: (47.145,96.179,72.545)
C2: (44.589,93.683,77.694)
C1': (43.804,95.909,77.041)
C3': (45.337,97.697,77.147)
O5': (45.913,97.534,74.259)
O4': (43.674,96.679,75.851)
C5': (44.901,98.439,74.708)
P: (46.187,97.311,72.707)
C4': (44.336,97.967,76.030)
C2': (44.526,96.789,78.064)
O2': (43.554,97.496,78.807)
N1: (44.585,94.697,76.744)
O4: (46.868,91.439,76.178)
O2: (43.931,93.727,78.714)
C6: (45.310,94.572,75.582)
C5: (46.075,93.506,75.321)
O3': (45.745,98.892,77.809)
C4: (49.585,93.484,76.583)
N3: (49.613,92.577,77.624)
OP1: (47.259,100.250,79.207)
OP2: (48.189,98.949,77.205)
C2: (49.031,92.720,78.857)
C1': (47.698,94.117,80.353)
C3': (48.574,96.041,81.390)
O5': (47.491,97.766,79.276)
O4': (46.749,95.170,80.224)
C5': (46.750,97.582,80.497)
P: (47.257,99.042,78.351)
C4': (47.098,96.253,81.125)
C2': (48.686,94.528,81.447)
O2': (48.275,94.023,82.699)
N1: (48.344,93.904,79.049)
O4: (50.140,93.203,75.518)
O2: (49.124,91.867,79.713)
C6: (48.275,94.850,78.048)
C5: (48.859,94.686,76.860)
O3': (48.964,96.649,82.604)
N3: (49.613,92.577,77.624)
OP1: (47.259,100.250,79.207)
OP2: (48.189,98.949,77.205)
C2: (49.031,92.720,78.857)
C1': (47.698,94.117,80.353)
C3': (48.574,96.041,81.390)
O5': (47.491,97.766,79.276)
O4': (46.749,95.170,80.224)
C5': (46.750,97.582,80.497)
P: (47.257,99.042,78.351)
C4': (47.098,96.253,81.125)
C2': (48.686,94.528,81.447)
O2': (48.275,94.023,82.699)
N1: (48.344,93.904,79.049)
O4: (50.140,93.203,75.518)
O2: (49.124,91.867,79.713)
C6: (48.275,94.850,78.048)
C5: (48.859,94.686,76.860)
O3': (48.964,96.649,82.604)
Image (generated by PyMOL):