ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:C108:C109

Extra

PDB:
ATOM 1 O3' G A 107 -15.293 -3.811 14.954 1.00 71.40 O
ATOM 2 P U A 108 -15.900 -4.685 13.760 1.00 78.73 P
ATOM 3 OP1 U A 108 -15.992 -6.086 14.232 1.00 56.27 O
ATOM 4 OP2 U A 108 -15.152 -4.359 12.525 1.00 79.63 O
ATOM 5 O5' U A 108 -17.388 -4.115 13.634 1.00 68.73 O
ATOM 6 C5' U A 108 -18.251 -4.201 14.760 1.00 77.18 C
ATOM 7 C4' U A 108 -19.554 -3.475 14.499 1.00 67.80 C
ATOM 8 O4' U A 108 -19.277 -2.087 14.201 1.00 67.43 O
ATOM 9 C3' U A 108 -20.318 -3.971 13.285 1.00 66.34 C
ATOM 10 O3' U A 108 -21.101 -5.111 13.634 1.00 76.87 O
ATOM 11 C2' U A 108 -21.175 -2.751 12.952 1.00 63.21 C
ATOM 12 O2' U A 108 -22.328 -2.652 13.762 1.00 69.92 O
ATOM 13 C1' U A 108 -20.227 -1.601 13.273 1.00 54.31 C
ATOM 14 N1 U A 108 -19.489 -1.089 12.094 1.00 56.13 N
ATOM 15 C2 U A 108 -20.138 -0.269 11.198 1.00 61.32 C
ATOM 16 O2 U A 108 -21.305 0.061 11.322 1.00 71.01 O
ATOM 17 N3 U A 108 -19.367 0.152 10.143 1.00 57.57 N
ATOM 18 C4 U A 108 -18.040 -0.161 9.907 1.00 62.99 C
ATOM 19 O4 U A 108 -17.474 0.292 8.916 1.00 72.35 O
ATOM 20 C5 U A 108 -17.434 -1.021 10.890 1.00 61.24 C
ATOM 21 C6 U A 108 -18.166 -1.443 11.925 1.00 58.93 C
ATOM 22 P U A 109 -21.063 -6.435 12.731 1.00 83.43 P
ATOM 23 OP1 U A 109 -21.436 -7.593 13.575 1.00 73.23 O
ATOM 24 OP2 U A 109 -19.785 -6.440 11.984 1.00 70.73 O
ATOM 25 O5' U A 109 -22.231 -6.155 11.680 1.00 60.51 O
TER

ATOM 1 O3' U B 108 -21.101 -5.111 13.634 1.00 76.87 O
ATOM 2 P U B 109 -21.063 -6.435 12.731 1.00 83.43 P
ATOM 3 OP1 U B 109 -21.436 -7.593 13.575 1.00 73.23 O
ATOM 4 OP2 U B 109 -19.785 -6.440 11.984 1.00 70.73 O
ATOM 5 O5' U B 109 -22.231 -6.155 11.680 1.00 60.51 O
ATOM 6 C5' U B 109 -21.989 -5.146 10.728 1.00 61.28 C
ATOM 7 C4' U B 109 -23.246 -4.670 10.037 1.00 59.91 C
ATOM 8 O4' U B 109 -23.157 -3.230 9.918 1.00 67.67 O
ATOM 9 C3' U B 109 -23.396 -5.222 8.626 1.00 66.70 C
ATOM 10 O3' U B 109 -24.380 -6.258 8.607 1.00 66.54 O
ATOM 11 C2' U B 109 -23.795 -4.002 7.796 1.00 57.87 C
ATOM 12 O2' U B 109 -25.193 -3.800 7.770 1.00 66.35 O
ATOM 13 C1' U B 109 -23.126 -2.860 8.555 1.00 67.56 C
ATOM 14 N1 U B 109 -21.711 -2.578 8.143 1.00 60.59 N
ATOM 15 C2 U B 109 -21.488 -1.747 7.066 1.00 69.76 C
ATOM 16 O2 U B 109 -22.390 -1.232 6.429 1.00 80.06 O
ATOM 17 N3 U B 109 -20.166 -1.539 6.756 1.00 67.04 N
ATOM 18 C4 U B 109 -19.064 -2.068 7.402 1.00 62.50 C
ATOM 19 O4 U B 109 -17.934 -1.793 7.011 1.00 64.58 O
ATOM 20 C5 U B 109 -19.375 -2.921 8.517 1.00 56.02 C
ATOM 21 C6 U B 109 -20.656 -3.134 8.836 1.00 53.38 C
ATOM 22 P A B 110 -24.066 -7.633 7.844 1.00 66.69 P
ATOM 23 OP1 A B 110 -25.269 -8.487 7.940 1.00 54.27 O
ATOM 24 OP2 A B 110 -22.759 -8.156 8.300 1.00 53.29 O
ATOM 25 O5' A B 110 -23.924 -7.145 6.328 1.00 69.91 O
TER

Atoms:
C4: (-18.040,-0.161,9.907)
N3: (-19.367,0.152,10.143)
OP1: (-15.992,-6.086,14.232)
OP2: (-15.152,-4.359,12.525)
C2: (-20.138,-0.269,11.198)
C1': (-20.227,-1.601,13.273)
C3': (-20.318,-3.971,13.285)
O5': (-17.388,-4.115,13.634)
O4': (-19.277,-2.087,14.201)
C5': (-18.251,-4.201,14.760)
P: (-15.900,-4.685,13.760)
C4': (-19.554,-3.475,14.499)
C2': (-21.175,-2.751,12.952)
O2': (-22.328,-2.652,13.762)
N1: (-19.489,-1.089,12.094)
O4: (-17.474,0.292,8.916)
O2: (-21.305,0.061,11.322)
C6: (-18.166,-1.443,11.925)
C5: (-17.434,-1.021,10.890)
O3': (-21.101,-5.111,13.634)
C4: (-19.064,-2.068,7.402)
N3: (-20.166,-1.539,6.756)
OP1: (-21.436,-7.593,13.575)
OP2: (-19.785,-6.440,11.984)
C2: (-21.488,-1.747,7.066)
C1': (-23.126,-2.860,8.555)
C3': (-23.396,-5.222,8.626)
O5': (-22.231,-6.155,11.680)
O4': (-23.157,-3.230,9.918)
C5': (-21.989,-5.146,10.728)
P: (-21.063,-6.435,12.731)
C4': (-23.246,-4.670,10.037)
C2': (-23.795,-4.002,7.796)
O2': (-25.193,-3.800,7.770)
N1: (-21.711,-2.578,8.143)
O4: (-17.934,-1.793,7.011)
O2: (-22.390,-1.232,6.429)
C6: (-20.656,-3.134,8.836)
C5: (-19.375,-2.921,8.517)
O3': (-24.380,-6.258,8.607)
Image (generated by PyMOL):
PyMOL image
show in jmol