Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1054:A1055
Extra
PDB:
ATOM 1 O3' G A1053 5.642 98.321 107.221 1.00 43.15 O
ATOM 2 P U A1054 6.573 98.410 108.538 1.00 43.71 P
ATOM 3 OP1 U A1054 5.681 98.186 109.708 1.00 42.07 O
ATOM 4 OP2 U A1054 7.359 99.662 108.464 1.00 44.31 O
ATOM 5 O5' U A1054 7.601 97.195 108.397 1.00 40.39 O
ATOM 6 C5' U A1054 7.171 95.829 108.476 1.00 40.35 C
ATOM 7 C4' U A1054 8.353 94.901 108.319 1.00 42.31 C
ATOM 8 O4' U A1054 8.891 95.025 106.978 1.00 44.34 O
ATOM 9 C3' U A1054 9.561 95.148 109.209 1.00 42.27 C
ATOM 10 O3' U A1054 9.344 94.661 110.527 1.00 41.39 O
ATOM 11 C2' U A1054 10.690 94.463 108.431 1.00 42.82 C
ATOM 12 O2' U A1054 10.826 93.056 108.527 1.00 42.56 O
ATOM 13 C1' U A1054 10.288 94.779 106.999 1.00 43.41 C
ATOM 14 N1 U A1054 10.997 95.957 106.496 1.00 43.77 N
ATOM 15 C2 U A1054 12.197 95.724 105.874 1.00 44.52 C
ATOM 16 O2 U A1054 12.689 94.608 105.785 1.00 45.16 O
ATOM 17 N3 U A1054 12.811 96.840 105.373 1.00 45.26 N
ATOM 18 C4 U A1054 12.364 98.142 105.460 1.00 46.48 C
ATOM 19 O4 U A1054 13.041 99.044 104.961 1.00 47.20 O
ATOM 20 C5 U A1054 11.119 98.304 106.152 1.00 45.73 C
ATOM 21 C6 U A1054 10.492 97.230 106.630 1.00 43.74 C
ATOM 22 P U A1055 10.504 94.780 111.623 1.00 41.32 P
ATOM 23 OP1 U A1055 9.946 94.192 112.867 1.00 41.19 O
ATOM 24 OP2 U A1055 11.032 96.168 111.640 1.00 42.18 O
ATOM 25 O5' U A1055 11.622 93.805 111.039 1.00 39.73 O
TER
ATOM 1 O3' U B1054 9.344 94.661 110.527 1.00 41.39 O
ATOM 2 P U B1055 10.504 94.780 111.623 1.00 41.32 P
ATOM 3 OP1 U B1055 9.946 94.192 112.867 1.00 41.19 O
ATOM 4 OP2 U B1055 11.032 96.168 111.640 1.00 42.18 O
ATOM 5 O5' U B1055 11.622 93.805 111.039 1.00 39.73 O
ATOM 6 C5' U B1055 13.014 93.929 111.409 1.00 38.66 C
ATOM 7 C4' U B1055 13.908 93.279 110.363 1.00 38.34 C
ATOM 8 O4' U B1055 13.680 93.889 109.063 1.00 38.55 O
ATOM 9 C3' U B1055 15.399 93.475 110.584 1.00 36.32 C
ATOM 10 O3' U B1055 15.946 92.537 111.482 1.00 34.22 O
ATOM 11 C2' U B1055 15.978 93.307 109.190 1.00 36.19 C
ATOM 12 O2' U B1055 16.117 91.972 108.779 1.00 35.76 O
ATOM 13 C1' U B1055 14.904 93.976 108.346 1.00 36.71 C
ATOM 14 N1 U B1055 15.231 95.390 108.141 1.00 36.78 N
ATOM 15 C2 U B1055 16.305 95.685 107.325 1.00 37.19 C
ATOM 16 O2 U B1055 16.979 94.825 106.788 1.00 37.92 O
ATOM 17 N3 U B1055 16.559 97.027 107.170 1.00 38.33 N
ATOM 18 C4 U B1055 15.856 98.079 107.737 1.00 40.76 C
ATOM 19 O4 U B1055 16.092 99.236 107.371 1.00 41.61 O
ATOM 20 C5 U B1055 14.772 97.678 108.586 1.00 39.56 C
ATOM 21 C6 U B1055 14.502 96.386 108.747 1.00 37.99 C
ATOM 22 P A B1056 17.321 92.875 112.214 1.00 34.02 P
ATOM 23 OP1 A B1056 17.732 91.708 112.999 1.00 34.78 O
ATOM 24 OP2 A B1056 17.159 94.185 112.885 1.00 32.66 O
ATOM 25 O5' A B1056 18.338 92.985 111.004 1.00 33.29 O
TER
ATOM 2 P U A1054 6.573 98.410 108.538 1.00 43.71 P
ATOM 3 OP1 U A1054 5.681 98.186 109.708 1.00 42.07 O
ATOM 4 OP2 U A1054 7.359 99.662 108.464 1.00 44.31 O
ATOM 5 O5' U A1054 7.601 97.195 108.397 1.00 40.39 O
ATOM 6 C5' U A1054 7.171 95.829 108.476 1.00 40.35 C
ATOM 7 C4' U A1054 8.353 94.901 108.319 1.00 42.31 C
ATOM 8 O4' U A1054 8.891 95.025 106.978 1.00 44.34 O
ATOM 9 C3' U A1054 9.561 95.148 109.209 1.00 42.27 C
ATOM 10 O3' U A1054 9.344 94.661 110.527 1.00 41.39 O
ATOM 11 C2' U A1054 10.690 94.463 108.431 1.00 42.82 C
ATOM 12 O2' U A1054 10.826 93.056 108.527 1.00 42.56 O
ATOM 13 C1' U A1054 10.288 94.779 106.999 1.00 43.41 C
ATOM 14 N1 U A1054 10.997 95.957 106.496 1.00 43.77 N
ATOM 15 C2 U A1054 12.197 95.724 105.874 1.00 44.52 C
ATOM 16 O2 U A1054 12.689 94.608 105.785 1.00 45.16 O
ATOM 17 N3 U A1054 12.811 96.840 105.373 1.00 45.26 N
ATOM 18 C4 U A1054 12.364 98.142 105.460 1.00 46.48 C
ATOM 19 O4 U A1054 13.041 99.044 104.961 1.00 47.20 O
ATOM 20 C5 U A1054 11.119 98.304 106.152 1.00 45.73 C
ATOM 21 C6 U A1054 10.492 97.230 106.630 1.00 43.74 C
ATOM 22 P U A1055 10.504 94.780 111.623 1.00 41.32 P
ATOM 23 OP1 U A1055 9.946 94.192 112.867 1.00 41.19 O
ATOM 24 OP2 U A1055 11.032 96.168 111.640 1.00 42.18 O
ATOM 25 O5' U A1055 11.622 93.805 111.039 1.00 39.73 O
TER
ATOM 1 O3' U B1054 9.344 94.661 110.527 1.00 41.39 O
ATOM 2 P U B1055 10.504 94.780 111.623 1.00 41.32 P
ATOM 3 OP1 U B1055 9.946 94.192 112.867 1.00 41.19 O
ATOM 4 OP2 U B1055 11.032 96.168 111.640 1.00 42.18 O
ATOM 5 O5' U B1055 11.622 93.805 111.039 1.00 39.73 O
ATOM 6 C5' U B1055 13.014 93.929 111.409 1.00 38.66 C
ATOM 7 C4' U B1055 13.908 93.279 110.363 1.00 38.34 C
ATOM 8 O4' U B1055 13.680 93.889 109.063 1.00 38.55 O
ATOM 9 C3' U B1055 15.399 93.475 110.584 1.00 36.32 C
ATOM 10 O3' U B1055 15.946 92.537 111.482 1.00 34.22 O
ATOM 11 C2' U B1055 15.978 93.307 109.190 1.00 36.19 C
ATOM 12 O2' U B1055 16.117 91.972 108.779 1.00 35.76 O
ATOM 13 C1' U B1055 14.904 93.976 108.346 1.00 36.71 C
ATOM 14 N1 U B1055 15.231 95.390 108.141 1.00 36.78 N
ATOM 15 C2 U B1055 16.305 95.685 107.325 1.00 37.19 C
ATOM 16 O2 U B1055 16.979 94.825 106.788 1.00 37.92 O
ATOM 17 N3 U B1055 16.559 97.027 107.170 1.00 38.33 N
ATOM 18 C4 U B1055 15.856 98.079 107.737 1.00 40.76 C
ATOM 19 O4 U B1055 16.092 99.236 107.371 1.00 41.61 O
ATOM 20 C5 U B1055 14.772 97.678 108.586 1.00 39.56 C
ATOM 21 C6 U B1055 14.502 96.386 108.747 1.00 37.99 C
ATOM 22 P A B1056 17.321 92.875 112.214 1.00 34.02 P
ATOM 23 OP1 A B1056 17.732 91.708 112.999 1.00 34.78 O
ATOM 24 OP2 A B1056 17.159 94.185 112.885 1.00 32.66 O
ATOM 25 O5' A B1056 18.338 92.985 111.004 1.00 33.29 O
TER
Atoms:
C4: (12.364,98.142,105.460)
N3: (12.811,96.840,105.373)
OP1: (5.681,98.186,109.708)
OP2: (7.359,99.662,108.464)
C2: (12.197,95.724,105.874)
C1': (10.288,94.779,106.999)
C3': (9.561,95.148,109.209)
O5': (7.601,97.195,108.397)
O4': (8.891,95.025,106.978)
C5': (7.171,95.829,108.476)
P: (6.573,98.410,108.538)
C4': (8.353,94.901,108.319)
C2': (10.690,94.463,108.431)
O2': (10.826,93.056,108.527)
N1: (10.997,95.957,106.496)
O4: (13.041,99.044,104.961)
O2: (12.689,94.608,105.785)
C6: (10.492,97.230,106.630)
C5: (11.119,98.304,106.152)
O3': (9.344,94.661,110.527)
N3: (12.811,96.840,105.373)
OP1: (5.681,98.186,109.708)
OP2: (7.359,99.662,108.464)
C2: (12.197,95.724,105.874)
C1': (10.288,94.779,106.999)
C3': (9.561,95.148,109.209)
O5': (7.601,97.195,108.397)
O4': (8.891,95.025,106.978)
C5': (7.171,95.829,108.476)
P: (6.573,98.410,108.538)
C4': (8.353,94.901,108.319)
C2': (10.690,94.463,108.431)
O2': (10.826,93.056,108.527)
N1: (10.997,95.957,106.496)
O4: (13.041,99.044,104.961)
O2: (12.689,94.608,105.785)
C6: (10.492,97.230,106.630)
C5: (11.119,98.304,106.152)
O3': (9.344,94.661,110.527)
C4: (15.856,98.079,107.737)
N3: (16.559,97.027,107.170)
OP1: (9.946,94.192,112.867)
OP2: (11.032,96.168,111.640)
C2: (16.305,95.685,107.325)
C1': (14.904,93.976,108.346)
C3': (15.399,93.475,110.584)
O5': (11.622,93.805,111.039)
O4': (13.680,93.889,109.063)
C5': (13.014,93.929,111.409)
P: (10.504,94.780,111.623)
C4': (13.908,93.279,110.363)
C2': (15.978,93.307,109.190)
O2': (16.117,91.972,108.779)
N1: (15.231,95.390,108.141)
O4: (16.092,99.236,107.371)
O2: (16.979,94.825,106.788)
C6: (14.502,96.386,108.747)
C5: (14.772,97.678,108.586)
O3': (15.946,92.537,111.482)
N3: (16.559,97.027,107.170)
OP1: (9.946,94.192,112.867)
OP2: (11.032,96.168,111.640)
C2: (16.305,95.685,107.325)
C1': (14.904,93.976,108.346)
C3': (15.399,93.475,110.584)
O5': (11.622,93.805,111.039)
O4': (13.680,93.889,109.063)
C5': (13.014,93.929,111.409)
P: (10.504,94.780,111.623)
C4': (13.908,93.279,110.363)
C2': (15.978,93.307,109.190)
O2': (16.117,91.972,108.779)
N1: (15.231,95.390,108.141)
O4: (16.092,99.236,107.371)
O2: (16.979,94.825,106.788)
C6: (14.502,96.386,108.747)
C5: (14.772,97.678,108.586)
O3': (15.946,92.537,111.482)
Image (generated by PyMOL):