ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SKW:B39:B40

Extra

PDB:
ATOM 1 O3' C A 38 21.549 15.732 52.373 1.00101.31 O
ATOM 2 P U A 39 21.555 14.857 53.713 1.00 97.83 P
ATOM 3 OP1 U A 39 21.551 15.809 54.846 1.00 97.98 O
ATOM 4 OP2 U A 39 22.673 13.890 53.599 1.00 97.41 O
ATOM 5 O5' U A 39 20.160 14.085 53.645 1.00118.91 O
ATOM 6 C5' U A 39 19.010 14.596 54.307 1.00119.84 C
ATOM 7 C4' U A 39 18.090 13.491 54.775 1.00121.33 C
ATOM 8 O4' U A 39 17.505 12.817 53.634 1.00120.58 O
ATOM 9 C3' U A 39 18.735 12.369 55.583 1.00122.61 C
ATOM 10 O3' U A 39 18.911 12.707 56.951 1.00124.30 O
ATOM 11 C2' U A 39 17.777 11.202 55.366 1.00121.31 C
ATOM 12 O2' U A 39 16.666 11.295 56.244 1.00120.74 O
ATOM 13 C1' U A 39 17.290 11.456 53.937 1.00120.51 C
ATOM 14 N1 U A 39 18.006 10.628 52.943 1.00118.98 N
ATOM 15 C2 U A 39 17.636 9.300 52.855 1.00119.82 C
ATOM 16 O2 U A 39 16.776 8.805 53.564 1.00121.31 O
ATOM 17 N3 U A 39 18.315 8.570 51.912 1.00118.47 N
ATOM 18 C4 U A 39 19.300 9.022 51.061 1.00116.17 C
ATOM 19 O4 U A 39 19.815 8.234 50.265 1.00114.35 O
ATOM 20 C5 U A 39 19.620 10.411 51.210 1.00115.87 C
ATOM 21 C6 U A 39 18.976 11.151 52.120 1.00116.65 C
ATOM 22 P U A 40 19.554 11.649 57.979 1.00128.69 P
ATOM 23 OP1 U A 40 19.839 12.380 59.240 1.00128.87 O
ATOM 24 OP2 U A 40 20.672 10.977 57.276 1.00128.57 O
ATOM 25 O5' U A 40 18.373 10.617 58.215 1.00101.01 O
TER

ATOM 1 O3' U B 39 18.911 12.707 56.951 1.00124.30 O
ATOM 2 P U B 40 19.554 11.649 57.979 1.00128.69 P
ATOM 3 OP1 U B 40 19.839 12.380 59.240 1.00128.87 O
ATOM 4 OP2 U B 40 20.672 10.977 57.276 1.00128.57 O
ATOM 5 O5' U B 40 18.373 10.617 58.215 1.00101.01 O
ATOM 6 C5' U B 40 18.572 9.472 59.019 1.00 99.46 C
ATOM 7 C4' U B 40 17.923 8.259 58.417 1.00 99.57 C
ATOM 8 O4' U B 40 17.800 8.415 56.978 1.00 99.27 O
ATOM 9 C3' U B 40 18.685 6.961 58.577 1.00101.36 C
ATOM 10 O3' U B 40 18.539 6.393 59.864 1.00103.19 O
ATOM 11 C2' U B 40 18.118 6.098 57.454 1.00102.99 C
ATOM 12 O2' U B 40 16.881 5.518 57.840 1.00105.67 O
ATOM 13 C1' U B 40 17.852 7.143 56.358 1.00 99.78 C
ATOM 14 N1 U B 40 18.917 7.147 55.314 1.00 96.77 N
ATOM 15 C2 U B 40 19.045 6.004 54.535 1.00 93.09 C
ATOM 16 O2 U B 40 18.333 5.023 54.659 1.00 92.84 O
ATOM 17 N3 U B 40 20.045 6.033 53.595 1.00 91.32 N
ATOM 18 C4 U B 40 20.923 7.061 53.337 1.00 92.44 C
ATOM 19 O4 U B 40 21.761 6.921 52.443 1.00 76.99 O
ATOM 20 C5 U B 40 20.738 8.210 54.173 1.00 94.75 C
ATOM 21 C6 U B 40 19.770 8.211 55.106 1.00 97.06 C
ATOM 22 P C B 41 19.780 5.648 60.562 1.00173.11 P
ATOM 23 OP1 C B 41 19.464 5.525 62.005 1.00173.76 O
ATOM 24 OP2 C B 41 21.008 6.377 60.162 1.00172.12 O
ATOM 25 O5' C B 41 19.755 4.211 59.878 1.00122.44 O
TER

Atoms:
C4: (19.300,9.022,51.061)
N3: (18.315,8.570,51.912)
OP1: (21.551,15.809,54.846)
OP2: (22.673,13.890,53.599)
C2: (17.636,9.300,52.855)
C1': (17.290,11.456,53.937)
C3': (18.735,12.369,55.583)
O5': (20.160,14.085,53.645)
O4': (17.505,12.817,53.634)
C5': (19.010,14.596,54.307)
P: (21.555,14.857,53.713)
C4': (18.090,13.491,54.775)
C2': (17.777,11.202,55.366)
O2': (16.666,11.295,56.244)
N1: (18.006,10.628,52.943)
O4: (19.815,8.234,50.265)
O2: (16.776,8.805,53.564)
C6: (18.976,11.151,52.120)
C5: (19.620,10.411,51.210)
O3': (18.911,12.707,56.951)
C4: (20.923,7.061,53.337)
N3: (20.045,6.033,53.595)
OP1: (19.839,12.380,59.240)
OP2: (20.672,10.977,57.276)
C2: (19.045,6.004,54.535)
C1': (17.852,7.143,56.358)
C3': (18.685,6.961,58.577)
O5': (18.373,10.617,58.215)
O4': (17.800,8.415,56.978)
C5': (18.572,9.472,59.019)
P: (19.554,11.649,57.979)
C4': (17.923,8.259,58.417)
C2': (18.118,6.098,57.454)
O2': (16.881,5.518,57.840)
N1: (18.917,7.147,55.314)
O4: (21.761,6.921,52.443)
O2: (18.333,5.023,54.659)
C6: (19.770,8.211,55.106)
C5: (20.738,8.210,54.173)
O3': (18.539,6.393,59.864)
Image (generated by PyMOL):
PyMOL image
show in jmol