Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0U:A91:A38
Extra
PDB:
ATOM 1 O3' U A 90 -6.458 35.651 -13.811 1.00 51.39 O
ATOM 2 P C A 91 -7.733 35.023 -14.561 1.00 48.20 P
ATOM 3 OP1 C A 91 -8.928 35.309 -13.735 1.00 52.04 O
ATOM 4 OP2 C A 91 -7.396 33.620 -14.882 1.00 47.02 O
ATOM 5 O5' C A 91 -7.836 35.790 -15.957 1.00 45.13 O
ATOM 6 C5' C A 91 -7.150 35.299 -17.088 1.00 45.95 C
ATOM 7 C4' C A 91 -7.589 36.037 -18.339 1.00 48.47 C
ATOM 8 O4' C A 91 -9.031 36.176 -18.353 1.00 48.77 O
ATOM 9 C3' C A 91 -7.095 37.469 -18.452 1.00 50.59 C
ATOM 10 O3' C A 91 -5.777 37.476 -18.972 1.00 49.01 O
ATOM 11 C2' C A 91 -8.095 38.039 -19.450 1.00 51.17 C
ATOM 12 O2' C A 91 -7.826 37.615 -20.771 1.00 54.23 O
ATOM 13 C1' C A 91 -9.390 37.402 -18.963 1.00 48.84 C
ATOM 14 N1 C A 91 -10.128 38.243 -17.980 1.00 48.73 N
ATOM 15 C2 C A 91 -10.774 39.404 -18.412 1.00 50.72 C
ATOM 16 O2 C A 91 -10.711 39.703 -19.609 1.00 53.61 O
ATOM 17 N3 C A 91 -11.442 40.169 -17.514 1.00 50.25 N
ATOM 18 C4 C A 91 -11.481 39.805 -16.231 1.00 50.55 C
ATOM 19 N4 C A 91 -12.150 40.578 -15.367 1.00 48.98 N
ATOM 20 C5 C A 91 -10.832 38.621 -15.775 1.00 49.77 C
ATOM 21 C6 C A 91 -10.175 37.879 -16.671 1.00 49.01 C
ATOM 22 P C A 92 -4.657 38.396 -18.297 1.00 48.20 P
ATOM 23 OP1 C A 92 -3.370 37.682 -18.445 1.00 52.32 O
ATOM 24 OP2 C A 92 -5.111 38.818 -16.949 1.00 47.27 O
ATOM 25 O5' C A 92 -4.620 39.649 -19.287 1.00 49.84 O
TER
ATOM 1 O3' C B 37 -19.134 39.806 -11.009 1.00 48.61 O
ATOM 2 P A B 38 -17.659 40.375 -11.250 1.00 49.83 P
ATOM 3 OP1 A B 38 -17.128 40.740 -9.918 1.00 46.58 O
ATOM 4 OP2 A B 38 -17.688 41.378 -12.340 1.00 45.12 O
ATOM 5 O5' A B 38 -16.879 39.093 -11.797 1.00 46.42 O
ATOM 6 C5' A B 38 -16.756 37.942 -10.984 1.00 44.85 C
ATOM 7 C4' A B 38 -15.377 37.359 -11.198 1.00 46.39 C
ATOM 8 O4' A B 38 -15.254 36.919 -12.575 1.00 45.32 O
ATOM 9 C3' A B 38 -14.248 38.358 -10.961 1.00 44.60 C
ATOM 10 O3' A B 38 -13.212 37.752 -10.222 1.00 46.92 O
ATOM 11 C2' A B 38 -13.746 38.652 -12.363 1.00 45.16 C
ATOM 12 O2' A B 38 -12.367 38.945 -12.360 1.00 49.13 O
ATOM 13 C1' A B 38 -13.980 37.305 -13.026 1.00 45.09 C
ATOM 14 N9 A B 38 -13.976 37.393 -14.478 1.00 46.36 N
ATOM 15 C8 A B 38 -14.616 38.325 -15.241 1.00 48.43 C
ATOM 16 N7 A B 38 -14.430 38.174 -16.530 1.00 48.49 N
ATOM 17 C5 A B 38 -13.606 37.067 -16.614 1.00 47.59 C
ATOM 18 C6 A B 38 -13.042 36.392 -17.710 1.00 48.25 C
ATOM 19 N6 A B 38 -13.243 36.768 -18.976 1.00 49.91 N
ATOM 20 N1 A B 38 -12.266 35.321 -17.459 1.00 47.32 N
ATOM 21 C2 A B 38 -12.073 34.963 -16.189 1.00 48.09 C
ATOM 22 N3 A B 38 -12.547 35.519 -15.076 1.00 49.69 N
ATOM 23 C4 A B 38 -13.315 36.576 -15.362 1.00 47.32 C
ATOM 24 P G B 39 -13.340 37.479 -8.653 1.00 49.20 P
ATOM 25 OP1 G B 39 -13.808 36.080 -8.484 1.00 42.47 O
ATOM 26 OP2 G B 39 -14.040 38.623 -8.021 1.00 44.77 O
ATOM 27 O5' G B 39 -11.810 37.529 -8.199 1.00 50.17 O
TER
ATOM 2 P C A 91 -7.733 35.023 -14.561 1.00 48.20 P
ATOM 3 OP1 C A 91 -8.928 35.309 -13.735 1.00 52.04 O
ATOM 4 OP2 C A 91 -7.396 33.620 -14.882 1.00 47.02 O
ATOM 5 O5' C A 91 -7.836 35.790 -15.957 1.00 45.13 O
ATOM 6 C5' C A 91 -7.150 35.299 -17.088 1.00 45.95 C
ATOM 7 C4' C A 91 -7.589 36.037 -18.339 1.00 48.47 C
ATOM 8 O4' C A 91 -9.031 36.176 -18.353 1.00 48.77 O
ATOM 9 C3' C A 91 -7.095 37.469 -18.452 1.00 50.59 C
ATOM 10 O3' C A 91 -5.777 37.476 -18.972 1.00 49.01 O
ATOM 11 C2' C A 91 -8.095 38.039 -19.450 1.00 51.17 C
ATOM 12 O2' C A 91 -7.826 37.615 -20.771 1.00 54.23 O
ATOM 13 C1' C A 91 -9.390 37.402 -18.963 1.00 48.84 C
ATOM 14 N1 C A 91 -10.128 38.243 -17.980 1.00 48.73 N
ATOM 15 C2 C A 91 -10.774 39.404 -18.412 1.00 50.72 C
ATOM 16 O2 C A 91 -10.711 39.703 -19.609 1.00 53.61 O
ATOM 17 N3 C A 91 -11.442 40.169 -17.514 1.00 50.25 N
ATOM 18 C4 C A 91 -11.481 39.805 -16.231 1.00 50.55 C
ATOM 19 N4 C A 91 -12.150 40.578 -15.367 1.00 48.98 N
ATOM 20 C5 C A 91 -10.832 38.621 -15.775 1.00 49.77 C
ATOM 21 C6 C A 91 -10.175 37.879 -16.671 1.00 49.01 C
ATOM 22 P C A 92 -4.657 38.396 -18.297 1.00 48.20 P
ATOM 23 OP1 C A 92 -3.370 37.682 -18.445 1.00 52.32 O
ATOM 24 OP2 C A 92 -5.111 38.818 -16.949 1.00 47.27 O
ATOM 25 O5' C A 92 -4.620 39.649 -19.287 1.00 49.84 O
TER
ATOM 1 O3' C B 37 -19.134 39.806 -11.009 1.00 48.61 O
ATOM 2 P A B 38 -17.659 40.375 -11.250 1.00 49.83 P
ATOM 3 OP1 A B 38 -17.128 40.740 -9.918 1.00 46.58 O
ATOM 4 OP2 A B 38 -17.688 41.378 -12.340 1.00 45.12 O
ATOM 5 O5' A B 38 -16.879 39.093 -11.797 1.00 46.42 O
ATOM 6 C5' A B 38 -16.756 37.942 -10.984 1.00 44.85 C
ATOM 7 C4' A B 38 -15.377 37.359 -11.198 1.00 46.39 C
ATOM 8 O4' A B 38 -15.254 36.919 -12.575 1.00 45.32 O
ATOM 9 C3' A B 38 -14.248 38.358 -10.961 1.00 44.60 C
ATOM 10 O3' A B 38 -13.212 37.752 -10.222 1.00 46.92 O
ATOM 11 C2' A B 38 -13.746 38.652 -12.363 1.00 45.16 C
ATOM 12 O2' A B 38 -12.367 38.945 -12.360 1.00 49.13 O
ATOM 13 C1' A B 38 -13.980 37.305 -13.026 1.00 45.09 C
ATOM 14 N9 A B 38 -13.976 37.393 -14.478 1.00 46.36 N
ATOM 15 C8 A B 38 -14.616 38.325 -15.241 1.00 48.43 C
ATOM 16 N7 A B 38 -14.430 38.174 -16.530 1.00 48.49 N
ATOM 17 C5 A B 38 -13.606 37.067 -16.614 1.00 47.59 C
ATOM 18 C6 A B 38 -13.042 36.392 -17.710 1.00 48.25 C
ATOM 19 N6 A B 38 -13.243 36.768 -18.976 1.00 49.91 N
ATOM 20 N1 A B 38 -12.266 35.321 -17.459 1.00 47.32 N
ATOM 21 C2 A B 38 -12.073 34.963 -16.189 1.00 48.09 C
ATOM 22 N3 A B 38 -12.547 35.519 -15.076 1.00 49.69 N
ATOM 23 C4 A B 38 -13.315 36.576 -15.362 1.00 47.32 C
ATOM 24 P G B 39 -13.340 37.479 -8.653 1.00 49.20 P
ATOM 25 OP1 G B 39 -13.808 36.080 -8.484 1.00 42.47 O
ATOM 26 OP2 G B 39 -14.040 38.623 -8.021 1.00 44.77 O
ATOM 27 O5' G B 39 -11.810 37.529 -8.199 1.00 50.17 O
TER
Atoms:
C2: (-10.774,39.404,-18.412)
OP1: (-8.928,35.309,-13.735)
OP2: (-7.396,33.620,-14.882)
C4: (-11.481,39.805,-16.231)
O5': (-7.836,35.790,-15.957)
C3': (-7.095,37.469,-18.452)
C1': (-9.390,37.402,-18.963)
O4': (-9.031,36.176,-18.353)
C5': (-7.150,35.299,-17.088)
P: (-7.733,35.023,-14.561)
O2: (-10.711,39.703,-19.609)
C4': (-7.589,36.037,-18.339)
C2': (-8.095,38.039,-19.450)
O2': (-7.826,37.615,-20.771)
N1: (-10.128,38.243,-17.980)
N3: (-11.442,40.169,-17.514)
N4: (-12.150,40.578,-15.367)
C6: (-10.175,37.879,-16.671)
C5: (-10.832,38.621,-15.775)
O3': (-5.777,37.476,-18.972)
OP1: (-8.928,35.309,-13.735)
OP2: (-7.396,33.620,-14.882)
C4: (-11.481,39.805,-16.231)
O5': (-7.836,35.790,-15.957)
C3': (-7.095,37.469,-18.452)
C1': (-9.390,37.402,-18.963)
O4': (-9.031,36.176,-18.353)
C5': (-7.150,35.299,-17.088)
P: (-7.733,35.023,-14.561)
O2: (-10.711,39.703,-19.609)
C4': (-7.589,36.037,-18.339)
C2': (-8.095,38.039,-19.450)
O2': (-7.826,37.615,-20.771)
N1: (-10.128,38.243,-17.980)
N3: (-11.442,40.169,-17.514)
N4: (-12.150,40.578,-15.367)
C6: (-10.175,37.879,-16.671)
C5: (-10.832,38.621,-15.775)
O3': (-5.777,37.476,-18.972)
OP1: (-17.128,40.740,-9.918)
OP2: (-17.688,41.378,-12.340)
C3': (-14.248,38.358,-10.961)
C1': (-13.980,37.305,-13.026)
C5': (-16.756,37.942,-10.984)
O4': (-15.254,36.919,-12.575)
C8: (-14.616,38.325,-15.241)
O2': (-12.367,38.945,-12.360)
C6: (-13.042,36.392,-17.710)
C5: (-13.606,37.067,-16.614)
C4: (-13.315,36.576,-15.362)
P: (-17.659,40.375,-11.250)
C4': (-15.377,37.359,-11.198)
C2': (-13.746,38.652,-12.363)
C2: (-12.073,34.963,-16.189)
N1: (-12.266,35.321,-17.459)
N3: (-12.547,35.519,-15.076)
N6: (-13.243,36.768,-18.976)
N7: (-14.430,38.174,-16.530)
N9: (-13.976,37.393,-14.478)
O5': (-16.879,39.093,-11.797)
O3': (-13.212,37.752,-10.222)
OP2: (-17.688,41.378,-12.340)
C3': (-14.248,38.358,-10.961)
C1': (-13.980,37.305,-13.026)
C5': (-16.756,37.942,-10.984)
O4': (-15.254,36.919,-12.575)
C8: (-14.616,38.325,-15.241)
O2': (-12.367,38.945,-12.360)
C6: (-13.042,36.392,-17.710)
C5: (-13.606,37.067,-16.614)
C4: (-13.315,36.576,-15.362)
P: (-17.659,40.375,-11.250)
C4': (-15.377,37.359,-11.198)
C2': (-13.746,38.652,-12.363)
C2: (-12.073,34.963,-16.189)
N1: (-12.266,35.321,-17.459)
N3: (-12.547,35.519,-15.076)
N6: (-13.243,36.768,-18.976)
N7: (-14.430,38.174,-16.530)
N9: (-13.976,37.393,-14.478)
O5': (-16.879,39.093,-11.797)
O3': (-13.212,37.752,-10.222)
Image (generated by PyMOL):