Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YDH:A79:A80
Extra
PDB:
ATOM 1 O3' G A 78 21.894 -28.854 22.916 1.00 70.27 O
ATOM 2 P U A 79 21.436 -27.690 21.930 1.00 70.65 P
ATOM 3 OP1 U A 79 22.430 -26.591 22.008 1.00 72.68 O
ATOM 4 OP2 U A 79 19.987 -27.444 22.095 1.00 67.75 O
ATOM 5 O5' U A 79 21.635 -28.451 20.547 1.00 73.91 O
ATOM 6 C5' U A 79 22.912 -28.855 20.112 1.00 76.35 C
ATOM 7 C4' U A 79 22.751 -29.724 18.889 1.00 78.06 C
ATOM 8 O4' U A 79 21.975 -30.870 19.275 1.00 78.83 O
ATOM 9 C3' U A 79 21.917 -29.142 17.754 1.00 79.58 C
ATOM 10 O3' U A 79 22.661 -28.289 16.909 1.00 82.06 O
ATOM 11 C2' U A 79 21.477 -30.373 16.991 1.00 78.92 C
ATOM 12 O2' U A 79 22.499 -30.893 16.160 1.00 78.66 O
ATOM 13 C1' U A 79 21.167 -31.277 18.176 1.00 77.82 C
ATOM 14 N1 U A 79 19.726 -31.253 18.535 1.00 75.96 N
ATOM 15 C2 U A 79 18.895 -31.998 17.732 1.00 76.56 C
ATOM 16 O2 U A 79 19.326 -32.623 16.767 1.00 78.41 O
ATOM 17 N3 U A 79 17.562 -31.970 18.086 1.00 74.31 N
ATOM 18 C4 U A 79 16.995 -31.280 19.128 1.00 73.84 C
ATOM 19 O4 U A 79 15.782 -31.364 19.303 1.00 73.76 O
ATOM 20 C5 U A 79 17.936 -30.523 19.927 1.00 74.38 C
ATOM 21 C6 U A 79 19.238 -30.536 19.608 1.00 74.87 C
ATOM 22 P U A 80 21.836 -27.211 16.071 1.00 84.72 P
ATOM 23 OP1 U A 80 22.832 -26.235 15.574 1.00 84.58 O
ATOM 24 OP2 U A 80 20.663 -26.766 16.862 1.00 83.67 O
ATOM 25 O5' U A 80 21.263 -28.064 14.866 1.00 84.09 O
TER
ATOM 1 O3' U B 79 22.661 -28.289 16.909 1.00 82.06 O
ATOM 2 P U B 80 21.836 -27.211 16.071 1.00 84.72 P
ATOM 3 OP1 U B 80 22.832 -26.235 15.574 1.00 84.58 O
ATOM 4 OP2 U B 80 20.663 -26.766 16.862 1.00 83.67 O
ATOM 5 O5' U B 80 21.263 -28.064 14.866 1.00 84.09 O
ATOM 6 C5' U B 80 21.978 -28.197 13.680 1.00 86.88 C
ATOM 7 C4' U B 80 21.116 -29.084 12.834 1.00 88.44 C
ATOM 8 O4' U B 80 20.415 -29.992 13.705 1.00 87.87 O
ATOM 9 C3' U B 80 19.968 -28.384 12.140 1.00 90.11 C
ATOM 10 O3' U B 80 20.438 -27.637 11.034 1.00 92.16 O
ATOM 11 C2' U B 80 19.113 -29.591 11.785 1.00 89.72 C
ATOM 12 O2' U B 80 19.650 -30.415 10.750 1.00 90.69 O
ATOM 13 C1' U B 80 19.162 -30.319 13.124 1.00 88.57 C
ATOM 14 N1 U B 80 18.060 -29.970 14.071 1.00 86.85 N
ATOM 15 C2 U B 80 16.855 -30.634 13.973 1.00 85.36 C
ATOM 16 O2 U B 80 16.645 -31.487 13.130 1.00 81.92 O
ATOM 17 N3 U B 80 15.904 -30.249 14.897 1.00 86.19 N
ATOM 18 C4 U B 80 16.039 -29.277 15.888 1.00 86.87 C
ATOM 19 O4 U B 80 15.114 -28.992 16.658 1.00 87.96 O
ATOM 20 C5 U B 80 17.325 -28.636 15.923 1.00 86.53 C
ATOM 21 C6 U B 80 18.259 -29.002 15.040 1.00 87.01 C
ATOM 22 P G B 81 19.603 -26.353 10.591 1.00 95.38 P
ATOM 23 OP1 G B 81 20.331 -25.746 9.458 1.00 96.75 O
ATOM 24 OP2 G B 81 19.285 -25.514 11.773 1.00 96.32 O
ATOM 25 O5' G B 81 18.265 -27.030 10.055 1.00 94.91 O
TER
ATOM 2 P U A 79 21.436 -27.690 21.930 1.00 70.65 P
ATOM 3 OP1 U A 79 22.430 -26.591 22.008 1.00 72.68 O
ATOM 4 OP2 U A 79 19.987 -27.444 22.095 1.00 67.75 O
ATOM 5 O5' U A 79 21.635 -28.451 20.547 1.00 73.91 O
ATOM 6 C5' U A 79 22.912 -28.855 20.112 1.00 76.35 C
ATOM 7 C4' U A 79 22.751 -29.724 18.889 1.00 78.06 C
ATOM 8 O4' U A 79 21.975 -30.870 19.275 1.00 78.83 O
ATOM 9 C3' U A 79 21.917 -29.142 17.754 1.00 79.58 C
ATOM 10 O3' U A 79 22.661 -28.289 16.909 1.00 82.06 O
ATOM 11 C2' U A 79 21.477 -30.373 16.991 1.00 78.92 C
ATOM 12 O2' U A 79 22.499 -30.893 16.160 1.00 78.66 O
ATOM 13 C1' U A 79 21.167 -31.277 18.176 1.00 77.82 C
ATOM 14 N1 U A 79 19.726 -31.253 18.535 1.00 75.96 N
ATOM 15 C2 U A 79 18.895 -31.998 17.732 1.00 76.56 C
ATOM 16 O2 U A 79 19.326 -32.623 16.767 1.00 78.41 O
ATOM 17 N3 U A 79 17.562 -31.970 18.086 1.00 74.31 N
ATOM 18 C4 U A 79 16.995 -31.280 19.128 1.00 73.84 C
ATOM 19 O4 U A 79 15.782 -31.364 19.303 1.00 73.76 O
ATOM 20 C5 U A 79 17.936 -30.523 19.927 1.00 74.38 C
ATOM 21 C6 U A 79 19.238 -30.536 19.608 1.00 74.87 C
ATOM 22 P U A 80 21.836 -27.211 16.071 1.00 84.72 P
ATOM 23 OP1 U A 80 22.832 -26.235 15.574 1.00 84.58 O
ATOM 24 OP2 U A 80 20.663 -26.766 16.862 1.00 83.67 O
ATOM 25 O5' U A 80 21.263 -28.064 14.866 1.00 84.09 O
TER
ATOM 1 O3' U B 79 22.661 -28.289 16.909 1.00 82.06 O
ATOM 2 P U B 80 21.836 -27.211 16.071 1.00 84.72 P
ATOM 3 OP1 U B 80 22.832 -26.235 15.574 1.00 84.58 O
ATOM 4 OP2 U B 80 20.663 -26.766 16.862 1.00 83.67 O
ATOM 5 O5' U B 80 21.263 -28.064 14.866 1.00 84.09 O
ATOM 6 C5' U B 80 21.978 -28.197 13.680 1.00 86.88 C
ATOM 7 C4' U B 80 21.116 -29.084 12.834 1.00 88.44 C
ATOM 8 O4' U B 80 20.415 -29.992 13.705 1.00 87.87 O
ATOM 9 C3' U B 80 19.968 -28.384 12.140 1.00 90.11 C
ATOM 10 O3' U B 80 20.438 -27.637 11.034 1.00 92.16 O
ATOM 11 C2' U B 80 19.113 -29.591 11.785 1.00 89.72 C
ATOM 12 O2' U B 80 19.650 -30.415 10.750 1.00 90.69 O
ATOM 13 C1' U B 80 19.162 -30.319 13.124 1.00 88.57 C
ATOM 14 N1 U B 80 18.060 -29.970 14.071 1.00 86.85 N
ATOM 15 C2 U B 80 16.855 -30.634 13.973 1.00 85.36 C
ATOM 16 O2 U B 80 16.645 -31.487 13.130 1.00 81.92 O
ATOM 17 N3 U B 80 15.904 -30.249 14.897 1.00 86.19 N
ATOM 18 C4 U B 80 16.039 -29.277 15.888 1.00 86.87 C
ATOM 19 O4 U B 80 15.114 -28.992 16.658 1.00 87.96 O
ATOM 20 C5 U B 80 17.325 -28.636 15.923 1.00 86.53 C
ATOM 21 C6 U B 80 18.259 -29.002 15.040 1.00 87.01 C
ATOM 22 P G B 81 19.603 -26.353 10.591 1.00 95.38 P
ATOM 23 OP1 G B 81 20.331 -25.746 9.458 1.00 96.75 O
ATOM 24 OP2 G B 81 19.285 -25.514 11.773 1.00 96.32 O
ATOM 25 O5' G B 81 18.265 -27.030 10.055 1.00 94.91 O
TER
Atoms:
C4: (16.995,-31.280,19.128)
N3: (17.562,-31.970,18.086)
OP1: (22.430,-26.591,22.008)
OP2: (19.987,-27.444,22.095)
C2: (18.895,-31.998,17.732)
C1': (21.167,-31.277,18.176)
C3': (21.917,-29.142,17.754)
O5': (21.635,-28.451,20.547)
O4': (21.975,-30.870,19.275)
C5': (22.912,-28.855,20.112)
P: (21.436,-27.690,21.930)
C4': (22.751,-29.724,18.889)
C2': (21.477,-30.373,16.991)
O2': (22.499,-30.893,16.160)
N1: (19.726,-31.253,18.535)
O4: (15.782,-31.364,19.303)
O2: (19.326,-32.623,16.767)
C6: (19.238,-30.536,19.608)
C5: (17.936,-30.523,19.927)
O3': (22.661,-28.289,16.909)
N3: (17.562,-31.970,18.086)
OP1: (22.430,-26.591,22.008)
OP2: (19.987,-27.444,22.095)
C2: (18.895,-31.998,17.732)
C1': (21.167,-31.277,18.176)
C3': (21.917,-29.142,17.754)
O5': (21.635,-28.451,20.547)
O4': (21.975,-30.870,19.275)
C5': (22.912,-28.855,20.112)
P: (21.436,-27.690,21.930)
C4': (22.751,-29.724,18.889)
C2': (21.477,-30.373,16.991)
O2': (22.499,-30.893,16.160)
N1: (19.726,-31.253,18.535)
O4: (15.782,-31.364,19.303)
O2: (19.326,-32.623,16.767)
C6: (19.238,-30.536,19.608)
C5: (17.936,-30.523,19.927)
O3': (22.661,-28.289,16.909)
C4: (16.039,-29.277,15.888)
N3: (15.904,-30.249,14.897)
OP1: (22.832,-26.235,15.574)
OP2: (20.663,-26.766,16.862)
C2: (16.855,-30.634,13.973)
C1': (19.162,-30.319,13.124)
C3': (19.968,-28.384,12.140)
O5': (21.263,-28.064,14.866)
O4': (20.415,-29.992,13.705)
C5': (21.978,-28.197,13.680)
P: (21.836,-27.211,16.071)
C4': (21.116,-29.084,12.834)
C2': (19.113,-29.591,11.785)
O2': (19.650,-30.415,10.750)
N1: (18.060,-29.970,14.071)
O4: (15.114,-28.992,16.658)
O2: (16.645,-31.487,13.130)
C6: (18.259,-29.002,15.040)
C5: (17.325,-28.636,15.923)
O3': (20.438,-27.637,11.034)
N3: (15.904,-30.249,14.897)
OP1: (22.832,-26.235,15.574)
OP2: (20.663,-26.766,16.862)
C2: (16.855,-30.634,13.973)
C1': (19.162,-30.319,13.124)
C3': (19.968,-28.384,12.140)
O5': (21.263,-28.064,14.866)
O4': (20.415,-29.992,13.705)
C5': (21.978,-28.197,13.680)
P: (21.836,-27.211,16.071)
C4': (21.116,-29.084,12.834)
C2': (19.113,-29.591,11.785)
O2': (19.650,-30.415,10.750)
N1: (18.060,-29.970,14.071)
O4: (15.114,-28.992,16.658)
O2: (16.645,-31.487,13.130)
C6: (18.259,-29.002,15.040)
C5: (17.325,-28.636,15.923)
O3': (20.438,-27.637,11.034)
Image (generated by PyMOL):