Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIG:X94:X41
Extra
PDB:
ATOM 1 O3' U A 93 -3.300 48.694 12.212 1.00 20.75 O
ATOM 2 P C A 94 -4.159 49.220 13.453 1.00 20.84 P
ATOM 3 OP1 C A 94 -4.047 50.698 13.487 1.00 21.05 O
ATOM 4 OP2 C A 94 -3.818 48.404 14.644 1.00 21.04 O
ATOM 5 O5' C A 94 -5.643 48.849 12.986 1.00 20.88 O
ATOM 6 C5' C A 94 -6.707 48.809 13.926 1.00 21.04 C
ATOM 7 C4' C A 94 -8.024 48.518 13.238 1.00 21.29 C
ATOM 8 O4' C A 94 -8.240 49.503 12.201 1.00 21.68 O
ATOM 9 C3' C A 94 -8.104 47.207 12.478 1.00 21.37 C
ATOM 10 O3' C A 94 -8.366 46.115 13.337 1.00 21.03 O
ATOM 11 C2' C A 94 -9.275 47.481 11.549 1.00 21.35 C
ATOM 12 O2' C A 94 -10.518 47.353 12.205 1.00 20.75 O
ATOM 13 C1' C A 94 -9.035 48.938 11.175 1.00 21.70 C
ATOM 14 N1 C A 94 -8.359 49.121 9.846 1.00 21.99 N
ATOM 15 C2 C A 94 -9.117 49.050 8.656 1.00 22.15 C
ATOM 16 O2 C A 94 -10.340 48.826 8.705 1.00 22.50 O
ATOM 17 N3 C A 94 -8.473 49.224 7.463 1.00 21.84 N
ATOM 18 C4 C A 94 -7.151 49.462 7.426 1.00 21.66 C
ATOM 19 N4 C A 94 -6.569 49.627 6.229 1.00 21.55 N
ATOM 20 C5 C A 94 -6.370 49.536 8.622 1.00 21.37 C
ATOM 21 C6 C A 94 -7.008 49.365 9.790 1.00 21.70 C
ATOM 22 P C A 95 -7.863 44.660 12.888 1.00 20.96 P
ATOM 23 OP1 C A 95 -8.083 43.705 14.001 1.00 20.75 O
ATOM 24 OP2 C A 95 -6.509 44.805 12.302 1.00 20.88 O
ATOM 25 O5' C A 95 -8.881 44.296 11.708 1.00 21.21 O
TER
ATOM 1 O3' C B 40 -3.240 55.658 2.107 1.00 23.12 O
ATOM 2 P A B 41 -3.404 54.144 2.594 1.00 22.86 P
ATOM 3 OP1 A B 41 -2.141 53.428 2.291 1.00 22.93 O
ATOM 4 OP2 A B 41 -4.696 53.605 2.105 1.00 22.99 O
ATOM 5 O5' A B 41 -3.529 54.357 4.172 1.00 22.63 O
ATOM 6 C5' A B 41 -2.392 54.686 4.964 1.00 22.02 C
ATOM 7 C4' A B 41 -2.413 53.815 6.202 1.00 21.59 C
ATOM 8 O4' A B 41 -3.669 53.977 6.907 1.00 21.04 O
ATOM 9 C3' A B 41 -2.283 52.323 5.908 1.00 21.45 C
ATOM 10 O3' A B 41 -1.201 51.786 6.668 1.00 21.27 O
ATOM 11 C2' A B 41 -3.633 51.734 6.314 1.00 21.43 C
ATOM 12 O2' A B 41 -3.516 50.430 6.844 1.00 22.07 O
ATOM 13 C1' A B 41 -4.075 52.719 7.392 1.00 20.69 C
ATOM 14 N9 A B 41 -5.516 52.740 7.659 1.00 20.21 N
ATOM 15 C8 A B 41 -6.535 52.791 6.743 1.00 19.91 C
ATOM 16 N7 A B 41 -7.734 52.795 7.277 1.00 19.66 N
ATOM 17 C5 A B 41 -7.487 52.747 8.639 1.00 19.85 C
ATOM 18 C6 A B 41 -8.341 52.724 9.761 1.00 20.07 C
ATOM 19 N6 A B 41 -9.672 52.750 9.659 1.00 20.05 N
ATOM 20 N1 A B 41 -7.781 52.678 10.990 1.00 20.01 N
ATOM 21 C2 A B 41 -6.444 52.652 11.085 1.00 20.33 C
ATOM 22 N3 A B 41 -5.537 52.664 10.105 1.00 20.23 N
ATOM 23 C4 A B 41 -6.126 52.715 8.895 1.00 20.13 C
ATOM 24 P G B 42 0.299 51.968 6.142 1.00 20.80 P
ATOM 25 OP1 G B 42 0.783 53.323 6.499 1.00 20.94 O
ATOM 26 OP2 G B 42 0.309 51.534 4.727 1.00 20.92 O
ATOM 27 O5' G B 42 1.105 50.907 7.017 1.00 21.15 O
TER
ATOM 2 P C A 94 -4.159 49.220 13.453 1.00 20.84 P
ATOM 3 OP1 C A 94 -4.047 50.698 13.487 1.00 21.05 O
ATOM 4 OP2 C A 94 -3.818 48.404 14.644 1.00 21.04 O
ATOM 5 O5' C A 94 -5.643 48.849 12.986 1.00 20.88 O
ATOM 6 C5' C A 94 -6.707 48.809 13.926 1.00 21.04 C
ATOM 7 C4' C A 94 -8.024 48.518 13.238 1.00 21.29 C
ATOM 8 O4' C A 94 -8.240 49.503 12.201 1.00 21.68 O
ATOM 9 C3' C A 94 -8.104 47.207 12.478 1.00 21.37 C
ATOM 10 O3' C A 94 -8.366 46.115 13.337 1.00 21.03 O
ATOM 11 C2' C A 94 -9.275 47.481 11.549 1.00 21.35 C
ATOM 12 O2' C A 94 -10.518 47.353 12.205 1.00 20.75 O
ATOM 13 C1' C A 94 -9.035 48.938 11.175 1.00 21.70 C
ATOM 14 N1 C A 94 -8.359 49.121 9.846 1.00 21.99 N
ATOM 15 C2 C A 94 -9.117 49.050 8.656 1.00 22.15 C
ATOM 16 O2 C A 94 -10.340 48.826 8.705 1.00 22.50 O
ATOM 17 N3 C A 94 -8.473 49.224 7.463 1.00 21.84 N
ATOM 18 C4 C A 94 -7.151 49.462 7.426 1.00 21.66 C
ATOM 19 N4 C A 94 -6.569 49.627 6.229 1.00 21.55 N
ATOM 20 C5 C A 94 -6.370 49.536 8.622 1.00 21.37 C
ATOM 21 C6 C A 94 -7.008 49.365 9.790 1.00 21.70 C
ATOM 22 P C A 95 -7.863 44.660 12.888 1.00 20.96 P
ATOM 23 OP1 C A 95 -8.083 43.705 14.001 1.00 20.75 O
ATOM 24 OP2 C A 95 -6.509 44.805 12.302 1.00 20.88 O
ATOM 25 O5' C A 95 -8.881 44.296 11.708 1.00 21.21 O
TER
ATOM 1 O3' C B 40 -3.240 55.658 2.107 1.00 23.12 O
ATOM 2 P A B 41 -3.404 54.144 2.594 1.00 22.86 P
ATOM 3 OP1 A B 41 -2.141 53.428 2.291 1.00 22.93 O
ATOM 4 OP2 A B 41 -4.696 53.605 2.105 1.00 22.99 O
ATOM 5 O5' A B 41 -3.529 54.357 4.172 1.00 22.63 O
ATOM 6 C5' A B 41 -2.392 54.686 4.964 1.00 22.02 C
ATOM 7 C4' A B 41 -2.413 53.815 6.202 1.00 21.59 C
ATOM 8 O4' A B 41 -3.669 53.977 6.907 1.00 21.04 O
ATOM 9 C3' A B 41 -2.283 52.323 5.908 1.00 21.45 C
ATOM 10 O3' A B 41 -1.201 51.786 6.668 1.00 21.27 O
ATOM 11 C2' A B 41 -3.633 51.734 6.314 1.00 21.43 C
ATOM 12 O2' A B 41 -3.516 50.430 6.844 1.00 22.07 O
ATOM 13 C1' A B 41 -4.075 52.719 7.392 1.00 20.69 C
ATOM 14 N9 A B 41 -5.516 52.740 7.659 1.00 20.21 N
ATOM 15 C8 A B 41 -6.535 52.791 6.743 1.00 19.91 C
ATOM 16 N7 A B 41 -7.734 52.795 7.277 1.00 19.66 N
ATOM 17 C5 A B 41 -7.487 52.747 8.639 1.00 19.85 C
ATOM 18 C6 A B 41 -8.341 52.724 9.761 1.00 20.07 C
ATOM 19 N6 A B 41 -9.672 52.750 9.659 1.00 20.05 N
ATOM 20 N1 A B 41 -7.781 52.678 10.990 1.00 20.01 N
ATOM 21 C2 A B 41 -6.444 52.652 11.085 1.00 20.33 C
ATOM 22 N3 A B 41 -5.537 52.664 10.105 1.00 20.23 N
ATOM 23 C4 A B 41 -6.126 52.715 8.895 1.00 20.13 C
ATOM 24 P G B 42 0.299 51.968 6.142 1.00 20.80 P
ATOM 25 OP1 G B 42 0.783 53.323 6.499 1.00 20.94 O
ATOM 26 OP2 G B 42 0.309 51.534 4.727 1.00 20.92 O
ATOM 27 O5' G B 42 1.105 50.907 7.017 1.00 21.15 O
TER
Atoms:
C2: (-9.117,49.050,8.656)
OP1: (-4.047,50.698,13.487)
OP2: (-3.818,48.404,14.644)
C4: (-7.151,49.462,7.426)
O5': (-5.643,48.849,12.986)
C3': (-8.104,47.207,12.478)
C1': (-9.035,48.938,11.175)
O4': (-8.240,49.503,12.201)
C5': (-6.707,48.809,13.926)
P: (-4.159,49.220,13.453)
O2: (-10.340,48.826,8.705)
C4': (-8.024,48.518,13.238)
C2': (-9.275,47.481,11.549)
O2': (-10.518,47.353,12.205)
N1: (-8.359,49.121,9.846)
N3: (-8.473,49.224,7.463)
N4: (-6.569,49.627,6.229)
C6: (-7.008,49.365,9.790)
C5: (-6.370,49.536,8.622)
O3': (-8.366,46.115,13.337)
OP1: (-4.047,50.698,13.487)
OP2: (-3.818,48.404,14.644)
C4: (-7.151,49.462,7.426)
O5': (-5.643,48.849,12.986)
C3': (-8.104,47.207,12.478)
C1': (-9.035,48.938,11.175)
O4': (-8.240,49.503,12.201)
C5': (-6.707,48.809,13.926)
P: (-4.159,49.220,13.453)
O2: (-10.340,48.826,8.705)
C4': (-8.024,48.518,13.238)
C2': (-9.275,47.481,11.549)
O2': (-10.518,47.353,12.205)
N1: (-8.359,49.121,9.846)
N3: (-8.473,49.224,7.463)
N4: (-6.569,49.627,6.229)
C6: (-7.008,49.365,9.790)
C5: (-6.370,49.536,8.622)
O3': (-8.366,46.115,13.337)
OP1: (-2.141,53.428,2.291)
OP2: (-4.696,53.605,2.105)
C3': (-2.283,52.323,5.908)
C1': (-4.075,52.719,7.392)
C5': (-2.392,54.686,4.964)
O4': (-3.669,53.977,6.907)
C8: (-6.535,52.791,6.743)
O2': (-3.516,50.430,6.844)
C6: (-8.341,52.724,9.761)
C5: (-7.487,52.747,8.639)
C4: (-6.126,52.715,8.895)
P: (-3.404,54.144,2.594)
C4': (-2.413,53.815,6.202)
C2': (-3.633,51.734,6.314)
C2: (-6.444,52.652,11.085)
N1: (-7.781,52.678,10.990)
N3: (-5.537,52.664,10.105)
N6: (-9.672,52.750,9.659)
N7: (-7.734,52.795,7.277)
N9: (-5.516,52.740,7.659)
O5': (-3.529,54.357,4.172)
O3': (-1.201,51.786,6.668)
OP2: (-4.696,53.605,2.105)
C3': (-2.283,52.323,5.908)
C1': (-4.075,52.719,7.392)
C5': (-2.392,54.686,4.964)
O4': (-3.669,53.977,6.907)
C8: (-6.535,52.791,6.743)
O2': (-3.516,50.430,6.844)
C6: (-8.341,52.724,9.761)
C5: (-7.487,52.747,8.639)
C4: (-6.126,52.715,8.895)
P: (-3.404,54.144,2.594)
C4': (-2.413,53.815,6.202)
C2': (-3.633,51.734,6.314)
C2: (-6.444,52.652,11.085)
N1: (-7.781,52.678,10.990)
N3: (-5.537,52.664,10.105)
N6: (-9.672,52.750,9.659)
N7: (-7.734,52.795,7.277)
N9: (-5.516,52.740,7.659)
O5': (-3.529,54.357,4.172)
O3': (-1.201,51.786,6.668)
Image (generated by PyMOL):