Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIL:A94:A41
Extra
PDB:
ATOM 1 O3' U A 93 -3.814 48.819 11.982 1.00 18.94 O
ATOM 2 P C A 94 -4.577 49.425 13.255 1.00 18.93 P
ATOM 3 OP1 C A 94 -4.434 50.897 13.201 1.00 19.10 O
ATOM 4 OP2 C A 94 -4.167 48.674 14.463 1.00 19.30 O
ATOM 5 O5' C A 94 -6.096 49.055 12.923 1.00 19.68 O
ATOM 6 C5' C A 94 -7.115 49.120 13.917 1.00 20.47 C
ATOM 7 C4' C A 94 -8.457 48.760 13.307 1.00 20.85 C
ATOM 8 O4' C A 94 -8.784 49.725 12.273 1.00 21.11 O
ATOM 9 C3' C A 94 -8.515 47.420 12.581 1.00 21.52 C
ATOM 10 O3' C A 94 -8.701 46.331 13.484 1.00 21.92 O
ATOM 11 C2' C A 94 -9.712 47.637 11.661 1.00 21.54 C
ATOM 12 O2' C A 94 -10.957 47.505 12.325 1.00 22.21 O
ATOM 13 C1' C A 94 -9.491 49.083 11.223 1.00 21.16 C
ATOM 14 N1 C A 94 -8.754 49.221 9.906 1.00 20.79 N
ATOM 15 C2 C A 94 -9.470 49.134 8.697 1.00 20.65 C
ATOM 16 O2 C A 94 -10.693 48.947 8.712 1.00 20.44 O
ATOM 17 N3 C A 94 -8.796 49.261 7.522 1.00 20.56 N
ATOM 18 C4 C A 94 -7.474 49.461 7.515 1.00 20.56 C
ATOM 19 N4 C A 94 -6.870 49.577 6.327 1.00 20.63 N
ATOM 20 C5 C A 94 -6.721 49.548 8.727 1.00 20.45 C
ATOM 21 C6 C A 94 -7.395 49.425 9.882 1.00 20.57 C
ATOM 22 P C A 95 -8.173 44.863 13.115 1.00 22.40 P
ATOM 23 OP1 C A 95 -8.345 44.017 14.319 1.00 22.64 O
ATOM 24 OP2 C A 95 -6.831 44.970 12.498 1.00 22.36 O
ATOM 25 O5' C A 95 -9.188 44.394 11.971 1.00 22.45 O
TER
ATOM 1 O3' C B 40 -3.943 55.550 1.670 1.00 25.99 O
ATOM 2 P A B 41 -3.937 54.157 2.456 1.00 24.81 P
ATOM 3 OP1 A B 41 -2.619 53.522 2.222 1.00 25.29 O
ATOM 4 OP2 A B 41 -5.172 53.418 2.103 1.00 24.53 O
ATOM 5 O5' A B 41 -4.057 54.611 3.989 1.00 23.61 O
ATOM 6 C5' A B 41 -2.904 54.954 4.754 1.00 21.58 C
ATOM 7 C4' A B 41 -2.814 54.092 6.002 1.00 20.58 C
ATOM 8 O4' A B 41 -4.029 54.241 6.785 1.00 19.74 O
ATOM 9 C3' A B 41 -2.648 52.593 5.740 1.00 20.06 C
ATOM 10 O3' A B 41 -1.596 52.058 6.541 1.00 20.28 O
ATOM 11 C2' A B 41 -4.012 52.015 6.120 1.00 19.46 C
ATOM 12 O2' A B 41 -3.947 50.681 6.587 1.00 19.62 O
ATOM 13 C1' A B 41 -4.423 52.965 7.242 1.00 18.71 C
ATOM 14 N9 A B 41 -5.855 52.956 7.550 1.00 17.92 N
ATOM 15 C8 A B 41 -6.896 53.009 6.663 1.00 17.53 C
ATOM 16 N7 A B 41 -8.081 52.975 7.227 1.00 17.21 N
ATOM 17 C5 A B 41 -7.798 52.891 8.580 1.00 17.24 C
ATOM 18 C6 A B 41 -8.625 52.819 9.723 1.00 16.99 C
ATOM 19 N6 A B 41 -9.960 52.826 9.658 1.00 17.29 N
ATOM 20 N1 A B 41 -8.026 52.744 10.935 1.00 16.82 N
ATOM 21 C2 A B 41 -6.687 52.741 11.000 1.00 16.85 C
ATOM 22 N3 A B 41 -5.808 52.802 9.995 1.00 17.18 N
ATOM 23 C4 A B 41 -6.430 52.878 8.800 1.00 17.32 C
ATOM 24 P G B 42 -0.082 52.029 6.016 1.00 20.66 P
ATOM 25 OP1 G B 42 0.522 53.351 6.292 1.00 20.87 O
ATOM 26 OP2 G B 42 -0.075 51.499 4.632 1.00 20.66 O
ATOM 27 O5' G B 42 0.600 50.930 6.954 1.00 19.93 O
TER
ATOM 2 P C A 94 -4.577 49.425 13.255 1.00 18.93 P
ATOM 3 OP1 C A 94 -4.434 50.897 13.201 1.00 19.10 O
ATOM 4 OP2 C A 94 -4.167 48.674 14.463 1.00 19.30 O
ATOM 5 O5' C A 94 -6.096 49.055 12.923 1.00 19.68 O
ATOM 6 C5' C A 94 -7.115 49.120 13.917 1.00 20.47 C
ATOM 7 C4' C A 94 -8.457 48.760 13.307 1.00 20.85 C
ATOM 8 O4' C A 94 -8.784 49.725 12.273 1.00 21.11 O
ATOM 9 C3' C A 94 -8.515 47.420 12.581 1.00 21.52 C
ATOM 10 O3' C A 94 -8.701 46.331 13.484 1.00 21.92 O
ATOM 11 C2' C A 94 -9.712 47.637 11.661 1.00 21.54 C
ATOM 12 O2' C A 94 -10.957 47.505 12.325 1.00 22.21 O
ATOM 13 C1' C A 94 -9.491 49.083 11.223 1.00 21.16 C
ATOM 14 N1 C A 94 -8.754 49.221 9.906 1.00 20.79 N
ATOM 15 C2 C A 94 -9.470 49.134 8.697 1.00 20.65 C
ATOM 16 O2 C A 94 -10.693 48.947 8.712 1.00 20.44 O
ATOM 17 N3 C A 94 -8.796 49.261 7.522 1.00 20.56 N
ATOM 18 C4 C A 94 -7.474 49.461 7.515 1.00 20.56 C
ATOM 19 N4 C A 94 -6.870 49.577 6.327 1.00 20.63 N
ATOM 20 C5 C A 94 -6.721 49.548 8.727 1.00 20.45 C
ATOM 21 C6 C A 94 -7.395 49.425 9.882 1.00 20.57 C
ATOM 22 P C A 95 -8.173 44.863 13.115 1.00 22.40 P
ATOM 23 OP1 C A 95 -8.345 44.017 14.319 1.00 22.64 O
ATOM 24 OP2 C A 95 -6.831 44.970 12.498 1.00 22.36 O
ATOM 25 O5' C A 95 -9.188 44.394 11.971 1.00 22.45 O
TER
ATOM 1 O3' C B 40 -3.943 55.550 1.670 1.00 25.99 O
ATOM 2 P A B 41 -3.937 54.157 2.456 1.00 24.81 P
ATOM 3 OP1 A B 41 -2.619 53.522 2.222 1.00 25.29 O
ATOM 4 OP2 A B 41 -5.172 53.418 2.103 1.00 24.53 O
ATOM 5 O5' A B 41 -4.057 54.611 3.989 1.00 23.61 O
ATOM 6 C5' A B 41 -2.904 54.954 4.754 1.00 21.58 C
ATOM 7 C4' A B 41 -2.814 54.092 6.002 1.00 20.58 C
ATOM 8 O4' A B 41 -4.029 54.241 6.785 1.00 19.74 O
ATOM 9 C3' A B 41 -2.648 52.593 5.740 1.00 20.06 C
ATOM 10 O3' A B 41 -1.596 52.058 6.541 1.00 20.28 O
ATOM 11 C2' A B 41 -4.012 52.015 6.120 1.00 19.46 C
ATOM 12 O2' A B 41 -3.947 50.681 6.587 1.00 19.62 O
ATOM 13 C1' A B 41 -4.423 52.965 7.242 1.00 18.71 C
ATOM 14 N9 A B 41 -5.855 52.956 7.550 1.00 17.92 N
ATOM 15 C8 A B 41 -6.896 53.009 6.663 1.00 17.53 C
ATOM 16 N7 A B 41 -8.081 52.975 7.227 1.00 17.21 N
ATOM 17 C5 A B 41 -7.798 52.891 8.580 1.00 17.24 C
ATOM 18 C6 A B 41 -8.625 52.819 9.723 1.00 16.99 C
ATOM 19 N6 A B 41 -9.960 52.826 9.658 1.00 17.29 N
ATOM 20 N1 A B 41 -8.026 52.744 10.935 1.00 16.82 N
ATOM 21 C2 A B 41 -6.687 52.741 11.000 1.00 16.85 C
ATOM 22 N3 A B 41 -5.808 52.802 9.995 1.00 17.18 N
ATOM 23 C4 A B 41 -6.430 52.878 8.800 1.00 17.32 C
ATOM 24 P G B 42 -0.082 52.029 6.016 1.00 20.66 P
ATOM 25 OP1 G B 42 0.522 53.351 6.292 1.00 20.87 O
ATOM 26 OP2 G B 42 -0.075 51.499 4.632 1.00 20.66 O
ATOM 27 O5' G B 42 0.600 50.930 6.954 1.00 19.93 O
TER
Atoms:
C2: (-9.470,49.134,8.697)
OP1: (-4.434,50.897,13.201)
OP2: (-4.167,48.674,14.463)
C4: (-7.474,49.461,7.515)
O5': (-6.096,49.055,12.923)
C3': (-8.515,47.420,12.581)
C1': (-9.491,49.083,11.223)
O4': (-8.784,49.725,12.273)
C5': (-7.115,49.120,13.917)
P: (-4.577,49.425,13.255)
O2: (-10.693,48.947,8.712)
C4': (-8.457,48.760,13.307)
C2': (-9.712,47.637,11.661)
O2': (-10.957,47.505,12.325)
N1: (-8.754,49.221,9.906)
N3: (-8.796,49.261,7.522)
N4: (-6.870,49.577,6.327)
C6: (-7.395,49.425,9.882)
C5: (-6.721,49.548,8.727)
O3': (-8.701,46.331,13.484)
OP1: (-4.434,50.897,13.201)
OP2: (-4.167,48.674,14.463)
C4: (-7.474,49.461,7.515)
O5': (-6.096,49.055,12.923)
C3': (-8.515,47.420,12.581)
C1': (-9.491,49.083,11.223)
O4': (-8.784,49.725,12.273)
C5': (-7.115,49.120,13.917)
P: (-4.577,49.425,13.255)
O2: (-10.693,48.947,8.712)
C4': (-8.457,48.760,13.307)
C2': (-9.712,47.637,11.661)
O2': (-10.957,47.505,12.325)
N1: (-8.754,49.221,9.906)
N3: (-8.796,49.261,7.522)
N4: (-6.870,49.577,6.327)
C6: (-7.395,49.425,9.882)
C5: (-6.721,49.548,8.727)
O3': (-8.701,46.331,13.484)
OP1: (-2.619,53.522,2.222)
OP2: (-5.172,53.418,2.103)
C3': (-2.648,52.593,5.740)
C1': (-4.423,52.965,7.242)
C5': (-2.904,54.954,4.754)
O4': (-4.029,54.241,6.785)
C8: (-6.896,53.009,6.663)
O2': (-3.947,50.681,6.587)
C6: (-8.625,52.819,9.723)
C5: (-7.798,52.891,8.580)
C4: (-6.430,52.878,8.800)
P: (-3.937,54.157,2.456)
C4': (-2.814,54.092,6.002)
C2': (-4.012,52.015,6.120)
C2: (-6.687,52.741,11.000)
N1: (-8.026,52.744,10.935)
N3: (-5.808,52.802,9.995)
N6: (-9.960,52.826,9.658)
N7: (-8.081,52.975,7.227)
N9: (-5.855,52.956,7.550)
O5': (-4.057,54.611,3.989)
O3': (-1.596,52.058,6.541)
OP2: (-5.172,53.418,2.103)
C3': (-2.648,52.593,5.740)
C1': (-4.423,52.965,7.242)
C5': (-2.904,54.954,4.754)
O4': (-4.029,54.241,6.785)
C8: (-6.896,53.009,6.663)
O2': (-3.947,50.681,6.587)
C6: (-8.625,52.819,9.723)
C5: (-7.798,52.891,8.580)
C4: (-6.430,52.878,8.800)
P: (-3.937,54.157,2.456)
C4': (-2.814,54.092,6.002)
C2': (-4.012,52.015,6.120)
C2: (-6.687,52.741,11.000)
N1: (-8.026,52.744,10.935)
N3: (-5.808,52.802,9.995)
N6: (-9.960,52.826,9.658)
N7: (-8.081,52.975,7.227)
N9: (-5.855,52.956,7.550)
O5': (-4.057,54.611,3.989)
O3': (-1.596,52.058,6.541)
Image (generated by PyMOL):