Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIM:A94:A41
Extra
PDB:
ATOM 1 O3' U A 93 -3.302 48.825 12.166 1.00 30.98 O
ATOM 2 P C A 94 -4.189 49.401 13.363 1.00 32.09 P
ATOM 3 OP1 C A 94 -4.191 50.879 13.254 1.00 31.45 O
ATOM 4 OP2 C A 94 -3.743 48.760 14.625 1.00 31.66 O
ATOM 5 O5' C A 94 -5.646 48.856 12.964 1.00 32.10 O
ATOM 6 C5' C A 94 -6.707 48.788 13.914 1.00 32.39 C
ATOM 7 C4' C A 94 -8.052 48.539 13.246 1.00 32.75 C
ATOM 8 O4' C A 94 -8.314 49.568 12.259 1.00 32.69 O
ATOM 9 C3' C A 94 -8.196 47.247 12.448 1.00 32.98 C
ATOM 10 O3' C A 94 -8.472 46.134 13.277 1.00 33.04 O
ATOM 11 C2' C A 94 -9.391 47.574 11.569 1.00 32.97 C
ATOM 12 O2' C A 94 -10.607 47.442 12.276 1.00 33.51 O
ATOM 13 C1' C A 94 -9.117 49.036 11.218 1.00 32.97 C
ATOM 14 N1 C A 94 -8.421 49.207 9.888 1.00 33.17 N
ATOM 15 C2 C A 94 -9.162 49.164 8.689 1.00 33.31 C
ATOM 16 O2 C A 94 -10.390 48.988 8.720 1.00 33.66 O
ATOM 17 N3 C A 94 -8.501 49.317 7.507 1.00 33.06 N
ATOM 18 C4 C A 94 -7.175 49.507 7.482 1.00 32.66 C
ATOM 19 N4 C A 94 -6.579 49.652 6.292 1.00 32.27 N
ATOM 20 C5 C A 94 -6.405 49.550 8.684 1.00 32.64 C
ATOM 21 C6 C A 94 -7.062 49.399 9.843 1.00 32.92 C
ATOM 22 P C A 95 -7.865 44.711 12.877 1.00 33.22 P
ATOM 23 OP1 C A 95 -7.993 43.830 14.059 1.00 33.46 O
ATOM 24 OP2 C A 95 -6.535 44.929 12.269 1.00 33.28 O
ATOM 25 O5' C A 95 -8.845 44.200 11.717 1.00 34.66 O
TER
ATOM 1 O3' C B 40 -3.342 55.606 1.825 1.00 33.63 O
ATOM 2 P A B 41 -3.426 54.160 2.506 1.00 32.34 P
ATOM 3 OP1 A B 41 -2.106 53.501 2.371 1.00 32.57 O
ATOM 4 OP2 A B 41 -4.641 53.469 2.014 1.00 31.94 O
ATOM 5 O5' A B 41 -3.674 54.573 4.032 1.00 32.07 O
ATOM 6 C5' A B 41 -2.577 54.920 4.866 1.00 31.64 C
ATOM 7 C4' A B 41 -2.576 54.017 6.087 1.00 31.52 C
ATOM 8 O4' A B 41 -3.872 54.116 6.725 1.00 30.74 O
ATOM 9 C3' A B 41 -2.349 52.522 5.822 1.00 31.65 C
ATOM 10 O3' A B 41 -1.263 52.010 6.619 1.00 32.76 O
ATOM 11 C2' A B 41 -3.680 51.872 6.202 1.00 30.77 C
ATOM 12 O2' A B 41 -3.502 50.574 6.737 1.00 30.19 O
ATOM 13 C1' A B 41 -4.179 52.853 7.262 1.00 30.00 C
ATOM 14 N9 A B 41 -5.609 52.827 7.557 1.00 29.22 N
ATOM 15 C8 A B 41 -6.645 52.858 6.661 1.00 29.02 C
ATOM 16 N7 A B 41 -7.831 52.826 7.220 1.00 28.75 N
ATOM 17 C5 A B 41 -7.552 52.779 8.579 1.00 28.55 C
ATOM 18 C6 A B 41 -8.380 52.725 9.720 1.00 27.98 C
ATOM 19 N6 A B 41 -9.709 52.712 9.629 1.00 28.81 N
ATOM 20 N1 A B 41 -7.803 52.689 10.944 1.00 27.36 N
ATOM 21 C2 A B 41 -6.464 52.702 11.008 1.00 27.90 C
ATOM 22 N3 A B 41 -5.575 52.742 10.007 1.00 28.16 N
ATOM 23 C4 A B 41 -6.187 52.783 8.807 1.00 28.65 C
ATOM 24 P G B 42 0.253 52.155 6.120 1.00 33.27 P
ATOM 25 OP1 G B 42 0.734 53.496 6.528 1.00 33.56 O
ATOM 26 OP2 G B 42 0.324 51.764 4.693 1.00 32.93 O
ATOM 27 O5' G B 42 1.001 51.034 6.972 1.00 33.19 O
TER
ATOM 2 P C A 94 -4.189 49.401 13.363 1.00 32.09 P
ATOM 3 OP1 C A 94 -4.191 50.879 13.254 1.00 31.45 O
ATOM 4 OP2 C A 94 -3.743 48.760 14.625 1.00 31.66 O
ATOM 5 O5' C A 94 -5.646 48.856 12.964 1.00 32.10 O
ATOM 6 C5' C A 94 -6.707 48.788 13.914 1.00 32.39 C
ATOM 7 C4' C A 94 -8.052 48.539 13.246 1.00 32.75 C
ATOM 8 O4' C A 94 -8.314 49.568 12.259 1.00 32.69 O
ATOM 9 C3' C A 94 -8.196 47.247 12.448 1.00 32.98 C
ATOM 10 O3' C A 94 -8.472 46.134 13.277 1.00 33.04 O
ATOM 11 C2' C A 94 -9.391 47.574 11.569 1.00 32.97 C
ATOM 12 O2' C A 94 -10.607 47.442 12.276 1.00 33.51 O
ATOM 13 C1' C A 94 -9.117 49.036 11.218 1.00 32.97 C
ATOM 14 N1 C A 94 -8.421 49.207 9.888 1.00 33.17 N
ATOM 15 C2 C A 94 -9.162 49.164 8.689 1.00 33.31 C
ATOM 16 O2 C A 94 -10.390 48.988 8.720 1.00 33.66 O
ATOM 17 N3 C A 94 -8.501 49.317 7.507 1.00 33.06 N
ATOM 18 C4 C A 94 -7.175 49.507 7.482 1.00 32.66 C
ATOM 19 N4 C A 94 -6.579 49.652 6.292 1.00 32.27 N
ATOM 20 C5 C A 94 -6.405 49.550 8.684 1.00 32.64 C
ATOM 21 C6 C A 94 -7.062 49.399 9.843 1.00 32.92 C
ATOM 22 P C A 95 -7.865 44.711 12.877 1.00 33.22 P
ATOM 23 OP1 C A 95 -7.993 43.830 14.059 1.00 33.46 O
ATOM 24 OP2 C A 95 -6.535 44.929 12.269 1.00 33.28 O
ATOM 25 O5' C A 95 -8.845 44.200 11.717 1.00 34.66 O
TER
ATOM 1 O3' C B 40 -3.342 55.606 1.825 1.00 33.63 O
ATOM 2 P A B 41 -3.426 54.160 2.506 1.00 32.34 P
ATOM 3 OP1 A B 41 -2.106 53.501 2.371 1.00 32.57 O
ATOM 4 OP2 A B 41 -4.641 53.469 2.014 1.00 31.94 O
ATOM 5 O5' A B 41 -3.674 54.573 4.032 1.00 32.07 O
ATOM 6 C5' A B 41 -2.577 54.920 4.866 1.00 31.64 C
ATOM 7 C4' A B 41 -2.576 54.017 6.087 1.00 31.52 C
ATOM 8 O4' A B 41 -3.872 54.116 6.725 1.00 30.74 O
ATOM 9 C3' A B 41 -2.349 52.522 5.822 1.00 31.65 C
ATOM 10 O3' A B 41 -1.263 52.010 6.619 1.00 32.76 O
ATOM 11 C2' A B 41 -3.680 51.872 6.202 1.00 30.77 C
ATOM 12 O2' A B 41 -3.502 50.574 6.737 1.00 30.19 O
ATOM 13 C1' A B 41 -4.179 52.853 7.262 1.00 30.00 C
ATOM 14 N9 A B 41 -5.609 52.827 7.557 1.00 29.22 N
ATOM 15 C8 A B 41 -6.645 52.858 6.661 1.00 29.02 C
ATOM 16 N7 A B 41 -7.831 52.826 7.220 1.00 28.75 N
ATOM 17 C5 A B 41 -7.552 52.779 8.579 1.00 28.55 C
ATOM 18 C6 A B 41 -8.380 52.725 9.720 1.00 27.98 C
ATOM 19 N6 A B 41 -9.709 52.712 9.629 1.00 28.81 N
ATOM 20 N1 A B 41 -7.803 52.689 10.944 1.00 27.36 N
ATOM 21 C2 A B 41 -6.464 52.702 11.008 1.00 27.90 C
ATOM 22 N3 A B 41 -5.575 52.742 10.007 1.00 28.16 N
ATOM 23 C4 A B 41 -6.187 52.783 8.807 1.00 28.65 C
ATOM 24 P G B 42 0.253 52.155 6.120 1.00 33.27 P
ATOM 25 OP1 G B 42 0.734 53.496 6.528 1.00 33.56 O
ATOM 26 OP2 G B 42 0.324 51.764 4.693 1.00 32.93 O
ATOM 27 O5' G B 42 1.001 51.034 6.972 1.00 33.19 O
TER
Atoms:
C2: (-9.162,49.164,8.689)
OP1: (-4.191,50.879,13.254)
OP2: (-3.743,48.760,14.625)
C4: (-7.175,49.507,7.482)
O5': (-5.646,48.856,12.964)
C3': (-8.196,47.247,12.448)
C1': (-9.117,49.036,11.218)
O4': (-8.314,49.568,12.259)
C5': (-6.707,48.788,13.914)
P: (-4.189,49.401,13.363)
O2: (-10.390,48.988,8.720)
C4': (-8.052,48.539,13.246)
C2': (-9.391,47.574,11.569)
O2': (-10.607,47.442,12.276)
N1: (-8.421,49.207,9.888)
N3: (-8.501,49.317,7.507)
N4: (-6.579,49.652,6.292)
C6: (-7.062,49.399,9.843)
C5: (-6.405,49.550,8.684)
O3': (-8.472,46.134,13.277)
OP1: (-4.191,50.879,13.254)
OP2: (-3.743,48.760,14.625)
C4: (-7.175,49.507,7.482)
O5': (-5.646,48.856,12.964)
C3': (-8.196,47.247,12.448)
C1': (-9.117,49.036,11.218)
O4': (-8.314,49.568,12.259)
C5': (-6.707,48.788,13.914)
P: (-4.189,49.401,13.363)
O2: (-10.390,48.988,8.720)
C4': (-8.052,48.539,13.246)
C2': (-9.391,47.574,11.569)
O2': (-10.607,47.442,12.276)
N1: (-8.421,49.207,9.888)
N3: (-8.501,49.317,7.507)
N4: (-6.579,49.652,6.292)
C6: (-7.062,49.399,9.843)
C5: (-6.405,49.550,8.684)
O3': (-8.472,46.134,13.277)
OP1: (-2.106,53.501,2.371)
OP2: (-4.641,53.469,2.014)
C3': (-2.349,52.522,5.822)
C1': (-4.179,52.853,7.262)
C5': (-2.577,54.920,4.866)
O4': (-3.872,54.116,6.725)
C8: (-6.645,52.858,6.661)
O2': (-3.502,50.574,6.737)
C6: (-8.380,52.725,9.720)
C5: (-7.552,52.779,8.579)
C4: (-6.187,52.783,8.807)
P: (-3.426,54.160,2.506)
C4': (-2.576,54.017,6.087)
C2': (-3.680,51.872,6.202)
C2: (-6.464,52.702,11.008)
N1: (-7.803,52.689,10.944)
N3: (-5.575,52.742,10.007)
N6: (-9.709,52.712,9.629)
N7: (-7.831,52.826,7.220)
N9: (-5.609,52.827,7.557)
O5': (-3.674,54.573,4.032)
O3': (-1.263,52.010,6.619)
OP2: (-4.641,53.469,2.014)
C3': (-2.349,52.522,5.822)
C1': (-4.179,52.853,7.262)
C5': (-2.577,54.920,4.866)
O4': (-3.872,54.116,6.725)
C8: (-6.645,52.858,6.661)
O2': (-3.502,50.574,6.737)
C6: (-8.380,52.725,9.720)
C5: (-7.552,52.779,8.579)
C4: (-6.187,52.783,8.807)
P: (-3.426,54.160,2.506)
C4': (-2.576,54.017,6.087)
C2': (-3.680,51.872,6.202)
C2: (-6.464,52.702,11.008)
N1: (-7.803,52.689,10.944)
N3: (-5.575,52.742,10.007)
N6: (-9.709,52.712,9.629)
N7: (-7.831,52.826,7.220)
N9: (-5.609,52.827,7.557)
O5': (-3.674,54.573,4.032)
O3': (-1.263,52.010,6.619)
Image (generated by PyMOL):