Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIO:X94:X41
Extra
PDB:
ATOM 1 O3' U A 93 -4.145 48.239 12.080 1.00 24.87 O
ATOM 2 P C A 94 -4.987 48.719 13.352 1.00 25.46 P
ATOM 3 OP1 C A 94 -5.001 50.199 13.343 1.00 25.06 O
ATOM 4 OP2 C A 94 -4.490 47.992 14.545 1.00 26.36 O
ATOM 5 O5' C A 94 -6.455 48.180 13.017 1.00 25.53 O
ATOM 6 C5' C A 94 -7.534 48.355 13.940 1.00 26.01 C
ATOM 7 C4' C A 94 -8.852 47.887 13.346 1.00 25.79 C
ATOM 8 O4' C A 94 -9.261 48.814 12.308 1.00 26.07 O
ATOM 9 C3' C A 94 -8.806 46.552 12.619 1.00 26.37 C
ATOM 10 O3' C A 94 -8.900 45.451 13.512 1.00 27.05 O
ATOM 11 C2' C A 94 -10.009 46.669 11.688 1.00 26.10 C
ATOM 12 O2' C A 94 -11.247 46.480 12.345 1.00 26.86 O
ATOM 13 C1' C A 94 -9.873 48.115 11.236 1.00 25.41 C
ATOM 14 N1 C A 94 -9.099 48.303 9.944 1.00 24.75 N
ATOM 15 C2 C A 94 -9.778 48.208 8.717 1.00 24.60 C
ATOM 16 O2 C A 94 -10.989 47.962 8.711 1.00 24.95 O
ATOM 17 N3 C A 94 -9.087 48.385 7.556 1.00 24.32 N
ATOM 18 C4 C A 94 -7.775 48.647 7.587 1.00 24.30 C
ATOM 19 N4 C A 94 -7.144 48.813 6.421 1.00 24.30 N
ATOM 20 C5 C A 94 -7.057 48.747 8.821 1.00 24.41 C
ATOM 21 C6 C A 94 -7.752 48.572 9.957 1.00 24.39 C
ATOM 22 P C A 95 -8.281 44.035 13.091 1.00 27.48 P
ATOM 23 OP1 C A 95 -8.337 43.154 14.280 1.00 27.48 O
ATOM 24 OP2 C A 95 -6.988 44.292 12.415 1.00 27.25 O
ATOM 25 O5' C A 95 -9.291 43.481 11.985 1.00 27.62 O
TER
ATOM 1 O3' C B 40 -4.473 54.905 1.742 1.00 44.85 O
ATOM 2 P A B 41 -4.447 53.504 2.517 1.00 42.09 P
ATOM 3 OP1 A B 41 -3.099 52.926 2.318 1.00 42.57 O
ATOM 4 OP2 A B 41 -5.650 52.725 2.133 1.00 41.44 O
ATOM 5 O5' A B 41 -4.617 53.959 4.043 1.00 39.78 O
ATOM 6 C5' A B 41 -3.486 54.312 4.838 1.00 36.29 C
ATOM 7 C4' A B 41 -3.436 53.436 6.077 1.00 33.72 C
ATOM 8 O4' A B 41 -4.692 53.549 6.789 1.00 32.54 O
ATOM 9 C3' A B 41 -3.230 51.942 5.801 1.00 32.46 C
ATOM 10 O3' A B 41 -2.135 51.427 6.557 1.00 31.59 O
ATOM 11 C2' A B 41 -4.554 51.311 6.221 1.00 31.90 C
ATOM 12 O2' A B 41 -4.402 50.003 6.733 1.00 32.22 O
ATOM 13 C1' A B 41 -5.009 52.278 7.309 1.00 31.23 C
ATOM 14 N9 A B 41 -6.433 52.209 7.638 1.00 30.34 N
ATOM 15 C8 A B 41 -7.491 52.254 6.766 1.00 30.18 C
ATOM 16 N7 A B 41 -8.667 52.161 7.341 1.00 29.93 N
ATOM 17 C5 A B 41 -8.362 52.050 8.691 1.00 29.91 C
ATOM 18 C6 A B 41 -9.169 51.916 9.841 1.00 29.41 C
ATOM 19 N6 A B 41 -10.503 51.879 9.790 1.00 29.86 N
ATOM 20 N1 A B 41 -8.553 51.824 11.043 1.00 29.35 N
ATOM 21 C2 A B 41 -7.213 51.868 11.092 1.00 28.97 C
ATOM 22 N3 A B 41 -6.351 51.990 10.081 1.00 29.24 N
ATOM 23 C4 A B 41 -6.989 52.075 8.895 1.00 29.86 C
ATOM 24 P G B 42 -0.626 51.640 6.066 1.00 30.59 P
ATOM 25 OP1 G B 42 -0.187 52.999 6.460 1.00 30.99 O
ATOM 26 OP2 G B 42 -0.560 51.230 4.646 1.00 31.03 O
ATOM 27 O5' G B 42 0.179 50.570 6.946 1.00 29.96 O
TER
ATOM 2 P C A 94 -4.987 48.719 13.352 1.00 25.46 P
ATOM 3 OP1 C A 94 -5.001 50.199 13.343 1.00 25.06 O
ATOM 4 OP2 C A 94 -4.490 47.992 14.545 1.00 26.36 O
ATOM 5 O5' C A 94 -6.455 48.180 13.017 1.00 25.53 O
ATOM 6 C5' C A 94 -7.534 48.355 13.940 1.00 26.01 C
ATOM 7 C4' C A 94 -8.852 47.887 13.346 1.00 25.79 C
ATOM 8 O4' C A 94 -9.261 48.814 12.308 1.00 26.07 O
ATOM 9 C3' C A 94 -8.806 46.552 12.619 1.00 26.37 C
ATOM 10 O3' C A 94 -8.900 45.451 13.512 1.00 27.05 O
ATOM 11 C2' C A 94 -10.009 46.669 11.688 1.00 26.10 C
ATOM 12 O2' C A 94 -11.247 46.480 12.345 1.00 26.86 O
ATOM 13 C1' C A 94 -9.873 48.115 11.236 1.00 25.41 C
ATOM 14 N1 C A 94 -9.099 48.303 9.944 1.00 24.75 N
ATOM 15 C2 C A 94 -9.778 48.208 8.717 1.00 24.60 C
ATOM 16 O2 C A 94 -10.989 47.962 8.711 1.00 24.95 O
ATOM 17 N3 C A 94 -9.087 48.385 7.556 1.00 24.32 N
ATOM 18 C4 C A 94 -7.775 48.647 7.587 1.00 24.30 C
ATOM 19 N4 C A 94 -7.144 48.813 6.421 1.00 24.30 N
ATOM 20 C5 C A 94 -7.057 48.747 8.821 1.00 24.41 C
ATOM 21 C6 C A 94 -7.752 48.572 9.957 1.00 24.39 C
ATOM 22 P C A 95 -8.281 44.035 13.091 1.00 27.48 P
ATOM 23 OP1 C A 95 -8.337 43.154 14.280 1.00 27.48 O
ATOM 24 OP2 C A 95 -6.988 44.292 12.415 1.00 27.25 O
ATOM 25 O5' C A 95 -9.291 43.481 11.985 1.00 27.62 O
TER
ATOM 1 O3' C B 40 -4.473 54.905 1.742 1.00 44.85 O
ATOM 2 P A B 41 -4.447 53.504 2.517 1.00 42.09 P
ATOM 3 OP1 A B 41 -3.099 52.926 2.318 1.00 42.57 O
ATOM 4 OP2 A B 41 -5.650 52.725 2.133 1.00 41.44 O
ATOM 5 O5' A B 41 -4.617 53.959 4.043 1.00 39.78 O
ATOM 6 C5' A B 41 -3.486 54.312 4.838 1.00 36.29 C
ATOM 7 C4' A B 41 -3.436 53.436 6.077 1.00 33.72 C
ATOM 8 O4' A B 41 -4.692 53.549 6.789 1.00 32.54 O
ATOM 9 C3' A B 41 -3.230 51.942 5.801 1.00 32.46 C
ATOM 10 O3' A B 41 -2.135 51.427 6.557 1.00 31.59 O
ATOM 11 C2' A B 41 -4.554 51.311 6.221 1.00 31.90 C
ATOM 12 O2' A B 41 -4.402 50.003 6.733 1.00 32.22 O
ATOM 13 C1' A B 41 -5.009 52.278 7.309 1.00 31.23 C
ATOM 14 N9 A B 41 -6.433 52.209 7.638 1.00 30.34 N
ATOM 15 C8 A B 41 -7.491 52.254 6.766 1.00 30.18 C
ATOM 16 N7 A B 41 -8.667 52.161 7.341 1.00 29.93 N
ATOM 17 C5 A B 41 -8.362 52.050 8.691 1.00 29.91 C
ATOM 18 C6 A B 41 -9.169 51.916 9.841 1.00 29.41 C
ATOM 19 N6 A B 41 -10.503 51.879 9.790 1.00 29.86 N
ATOM 20 N1 A B 41 -8.553 51.824 11.043 1.00 29.35 N
ATOM 21 C2 A B 41 -7.213 51.868 11.092 1.00 28.97 C
ATOM 22 N3 A B 41 -6.351 51.990 10.081 1.00 29.24 N
ATOM 23 C4 A B 41 -6.989 52.075 8.895 1.00 29.86 C
ATOM 24 P G B 42 -0.626 51.640 6.066 1.00 30.59 P
ATOM 25 OP1 G B 42 -0.187 52.999 6.460 1.00 30.99 O
ATOM 26 OP2 G B 42 -0.560 51.230 4.646 1.00 31.03 O
ATOM 27 O5' G B 42 0.179 50.570 6.946 1.00 29.96 O
TER
Atoms:
C2: (-9.778,48.208,8.717)
OP1: (-5.001,50.199,13.343)
OP2: (-4.490,47.992,14.545)
C4: (-7.775,48.647,7.587)
O5': (-6.455,48.180,13.017)
C3': (-8.806,46.552,12.619)
C1': (-9.873,48.115,11.236)
O4': (-9.261,48.814,12.308)
C5': (-7.534,48.355,13.940)
P: (-4.987,48.719,13.352)
O2: (-10.989,47.962,8.711)
C4': (-8.852,47.887,13.346)
C2': (-10.009,46.669,11.688)
O2': (-11.247,46.480,12.345)
N1: (-9.099,48.303,9.944)
N3: (-9.087,48.385,7.556)
N4: (-7.144,48.813,6.421)
C6: (-7.752,48.572,9.957)
C5: (-7.057,48.747,8.821)
O3': (-8.900,45.451,13.512)
OP1: (-5.001,50.199,13.343)
OP2: (-4.490,47.992,14.545)
C4: (-7.775,48.647,7.587)
O5': (-6.455,48.180,13.017)
C3': (-8.806,46.552,12.619)
C1': (-9.873,48.115,11.236)
O4': (-9.261,48.814,12.308)
C5': (-7.534,48.355,13.940)
P: (-4.987,48.719,13.352)
O2: (-10.989,47.962,8.711)
C4': (-8.852,47.887,13.346)
C2': (-10.009,46.669,11.688)
O2': (-11.247,46.480,12.345)
N1: (-9.099,48.303,9.944)
N3: (-9.087,48.385,7.556)
N4: (-7.144,48.813,6.421)
C6: (-7.752,48.572,9.957)
C5: (-7.057,48.747,8.821)
O3': (-8.900,45.451,13.512)
OP1: (-3.099,52.926,2.318)
OP2: (-5.650,52.725,2.133)
C3': (-3.230,51.942,5.801)
C1': (-5.009,52.278,7.309)
C5': (-3.486,54.312,4.838)
O4': (-4.692,53.549,6.789)
C8: (-7.491,52.254,6.766)
O2': (-4.402,50.003,6.733)
C6: (-9.169,51.916,9.841)
C5: (-8.362,52.050,8.691)
C4: (-6.989,52.075,8.895)
P: (-4.447,53.504,2.517)
C4': (-3.436,53.436,6.077)
C2': (-4.554,51.311,6.221)
C2: (-7.213,51.868,11.092)
N1: (-8.553,51.824,11.043)
N3: (-6.351,51.990,10.081)
N6: (-10.503,51.879,9.790)
N7: (-8.667,52.161,7.341)
N9: (-6.433,52.209,7.638)
O5': (-4.617,53.959,4.043)
O3': (-2.135,51.427,6.557)
OP2: (-5.650,52.725,2.133)
C3': (-3.230,51.942,5.801)
C1': (-5.009,52.278,7.309)
C5': (-3.486,54.312,4.838)
O4': (-4.692,53.549,6.789)
C8: (-7.491,52.254,6.766)
O2': (-4.402,50.003,6.733)
C6: (-9.169,51.916,9.841)
C5: (-8.362,52.050,8.691)
C4: (-6.989,52.075,8.895)
P: (-4.447,53.504,2.517)
C4': (-3.436,53.436,6.077)
C2': (-4.554,51.311,6.221)
C2: (-7.213,51.868,11.092)
N1: (-8.553,51.824,11.043)
N3: (-6.351,51.990,10.081)
N6: (-10.503,51.879,9.790)
N7: (-8.667,52.161,7.341)
N9: (-6.433,52.209,7.638)
O5': (-4.617,53.959,4.043)
O3': (-2.135,51.427,6.557)
Image (generated by PyMOL):