Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIQ:A94:A41
Extra
PDB:
ATOM 1 O3' U A 93 -3.597 48.782 12.159 1.00 25.98 O
ATOM 2 P C A 94 -4.470 49.332 13.379 1.00 27.01 P
ATOM 3 OP1 C A 94 -4.386 50.810 13.344 1.00 26.48 O
ATOM 4 OP2 C A 94 -4.102 48.585 14.609 1.00 26.94 O
ATOM 5 O5' C A 94 -5.951 48.889 12.970 1.00 26.85 O
ATOM 6 C5' C A 94 -6.979 48.854 13.951 1.00 27.36 C
ATOM 7 C4' C A 94 -8.324 48.610 13.300 1.00 27.81 C
ATOM 8 O4' C A 94 -8.579 49.618 12.289 1.00 28.44 O
ATOM 9 C3' C A 94 -8.420 47.312 12.521 1.00 27.79 C
ATOM 10 O3' C A 94 -8.677 46.245 13.398 1.00 27.58 O
ATOM 11 C2' C A 94 -9.602 47.601 11.608 1.00 28.08 C
ATOM 12 O2' C A 94 -10.844 47.542 12.280 1.00 28.68 O
ATOM 13 C1' C A 94 -9.297 49.038 11.210 1.00 27.98 C
ATOM 14 N1 C A 94 -8.528 49.166 9.920 1.00 27.57 N
ATOM 15 C2 C A 94 -9.214 49.039 8.699 1.00 27.61 C
ATOM 16 O2 C A 94 -10.431 48.815 8.697 1.00 27.99 O
ATOM 17 N3 C A 94 -8.518 49.160 7.537 1.00 27.49 N
ATOM 18 C4 C A 94 -7.206 49.396 7.566 1.00 27.13 C
ATOM 19 N4 C A 94 -6.580 49.505 6.396 1.00 27.61 N
ATOM 20 C5 C A 94 -6.482 49.527 8.790 1.00 27.17 C
ATOM 21 C6 C A 94 -7.177 49.408 9.930 1.00 27.23 C
ATOM 22 P C A 95 -8.102 44.793 13.067 1.00 26.65 P
ATOM 23 OP1 C A 95 -8.336 43.979 14.283 1.00 27.21 O
ATOM 24 OP2 C A 95 -6.733 44.916 12.515 1.00 25.90 O
ATOM 25 O5' C A 95 -9.075 44.297 11.898 1.00 26.19 O
TER
ATOM 1 O3' C B 40 -3.693 55.528 1.611 1.00 43.33 O
ATOM 2 P A B 41 -3.564 54.116 2.350 1.00 41.41 P
ATOM 3 OP1 A B 41 -2.158 53.677 2.179 1.00 41.44 O
ATOM 4 OP2 A B 41 -4.673 53.237 1.899 1.00 40.59 O
ATOM 5 O5' A B 41 -3.818 54.506 3.884 1.00 38.61 O
ATOM 6 C5' A B 41 -2.732 54.874 4.731 1.00 35.18 C
ATOM 7 C4' A B 41 -2.773 54.088 6.029 1.00 32.74 C
ATOM 8 O4' A B 41 -4.069 54.247 6.666 1.00 31.93 O
ATOM 9 C3' A B 41 -2.561 52.582 5.876 1.00 31.74 C
ATOM 10 O3' A B 41 -1.447 52.164 6.661 1.00 30.92 O
ATOM 11 C2' A B 41 -3.872 51.974 6.372 1.00 31.28 C
ATOM 12 O2' A B 41 -3.693 50.746 7.047 1.00 31.78 O
ATOM 13 C1' A B 41 -4.350 53.045 7.346 1.00 30.77 C
ATOM 14 N9 A B 41 -5.771 52.936 7.687 1.00 29.93 N
ATOM 15 C8 A B 41 -6.825 52.909 6.816 1.00 29.44 C
ATOM 16 N7 A B 41 -7.993 52.790 7.403 1.00 29.42 N
ATOM 17 C5 A B 41 -7.691 52.738 8.753 1.00 29.23 C
ATOM 18 C6 A B 41 -8.498 52.612 9.910 1.00 29.19 C
ATOM 19 N6 A B 41 -9.832 52.515 9.863 1.00 29.47 N
ATOM 20 N1 A B 41 -7.882 52.588 11.117 1.00 28.67 N
ATOM 21 C2 A B 41 -6.546 52.684 11.159 1.00 28.40 C
ATOM 22 N3 A B 41 -5.688 52.804 10.140 1.00 28.73 N
ATOM 23 C4 A B 41 -6.323 52.826 8.951 1.00 29.26 C
ATOM 24 P G B 42 -0.006 51.972 5.994 1.00 30.17 P
ATOM 25 OP1 G B 42 0.770 53.219 6.178 1.00 30.29 O
ATOM 26 OP2 G B 42 -0.222 51.426 4.636 1.00 30.25 O
ATOM 27 O5' G B 42 0.661 50.836 6.902 1.00 29.89 O
TER
ATOM 2 P C A 94 -4.470 49.332 13.379 1.00 27.01 P
ATOM 3 OP1 C A 94 -4.386 50.810 13.344 1.00 26.48 O
ATOM 4 OP2 C A 94 -4.102 48.585 14.609 1.00 26.94 O
ATOM 5 O5' C A 94 -5.951 48.889 12.970 1.00 26.85 O
ATOM 6 C5' C A 94 -6.979 48.854 13.951 1.00 27.36 C
ATOM 7 C4' C A 94 -8.324 48.610 13.300 1.00 27.81 C
ATOM 8 O4' C A 94 -8.579 49.618 12.289 1.00 28.44 O
ATOM 9 C3' C A 94 -8.420 47.312 12.521 1.00 27.79 C
ATOM 10 O3' C A 94 -8.677 46.245 13.398 1.00 27.58 O
ATOM 11 C2' C A 94 -9.602 47.601 11.608 1.00 28.08 C
ATOM 12 O2' C A 94 -10.844 47.542 12.280 1.00 28.68 O
ATOM 13 C1' C A 94 -9.297 49.038 11.210 1.00 27.98 C
ATOM 14 N1 C A 94 -8.528 49.166 9.920 1.00 27.57 N
ATOM 15 C2 C A 94 -9.214 49.039 8.699 1.00 27.61 C
ATOM 16 O2 C A 94 -10.431 48.815 8.697 1.00 27.99 O
ATOM 17 N3 C A 94 -8.518 49.160 7.537 1.00 27.49 N
ATOM 18 C4 C A 94 -7.206 49.396 7.566 1.00 27.13 C
ATOM 19 N4 C A 94 -6.580 49.505 6.396 1.00 27.61 N
ATOM 20 C5 C A 94 -6.482 49.527 8.790 1.00 27.17 C
ATOM 21 C6 C A 94 -7.177 49.408 9.930 1.00 27.23 C
ATOM 22 P C A 95 -8.102 44.793 13.067 1.00 26.65 P
ATOM 23 OP1 C A 95 -8.336 43.979 14.283 1.00 27.21 O
ATOM 24 OP2 C A 95 -6.733 44.916 12.515 1.00 25.90 O
ATOM 25 O5' C A 95 -9.075 44.297 11.898 1.00 26.19 O
TER
ATOM 1 O3' C B 40 -3.693 55.528 1.611 1.00 43.33 O
ATOM 2 P A B 41 -3.564 54.116 2.350 1.00 41.41 P
ATOM 3 OP1 A B 41 -2.158 53.677 2.179 1.00 41.44 O
ATOM 4 OP2 A B 41 -4.673 53.237 1.899 1.00 40.59 O
ATOM 5 O5' A B 41 -3.818 54.506 3.884 1.00 38.61 O
ATOM 6 C5' A B 41 -2.732 54.874 4.731 1.00 35.18 C
ATOM 7 C4' A B 41 -2.773 54.088 6.029 1.00 32.74 C
ATOM 8 O4' A B 41 -4.069 54.247 6.666 1.00 31.93 O
ATOM 9 C3' A B 41 -2.561 52.582 5.876 1.00 31.74 C
ATOM 10 O3' A B 41 -1.447 52.164 6.661 1.00 30.92 O
ATOM 11 C2' A B 41 -3.872 51.974 6.372 1.00 31.28 C
ATOM 12 O2' A B 41 -3.693 50.746 7.047 1.00 31.78 O
ATOM 13 C1' A B 41 -4.350 53.045 7.346 1.00 30.77 C
ATOM 14 N9 A B 41 -5.771 52.936 7.687 1.00 29.93 N
ATOM 15 C8 A B 41 -6.825 52.909 6.816 1.00 29.44 C
ATOM 16 N7 A B 41 -7.993 52.790 7.403 1.00 29.42 N
ATOM 17 C5 A B 41 -7.691 52.738 8.753 1.00 29.23 C
ATOM 18 C6 A B 41 -8.498 52.612 9.910 1.00 29.19 C
ATOM 19 N6 A B 41 -9.832 52.515 9.863 1.00 29.47 N
ATOM 20 N1 A B 41 -7.882 52.588 11.117 1.00 28.67 N
ATOM 21 C2 A B 41 -6.546 52.684 11.159 1.00 28.40 C
ATOM 22 N3 A B 41 -5.688 52.804 10.140 1.00 28.73 N
ATOM 23 C4 A B 41 -6.323 52.826 8.951 1.00 29.26 C
ATOM 24 P G B 42 -0.006 51.972 5.994 1.00 30.17 P
ATOM 25 OP1 G B 42 0.770 53.219 6.178 1.00 30.29 O
ATOM 26 OP2 G B 42 -0.222 51.426 4.636 1.00 30.25 O
ATOM 27 O5' G B 42 0.661 50.836 6.902 1.00 29.89 O
TER
Atoms:
C2: (-9.214,49.039,8.699)
OP1: (-4.386,50.810,13.344)
OP2: (-4.102,48.585,14.609)
C4: (-7.206,49.396,7.566)
O5': (-5.951,48.889,12.970)
C3': (-8.420,47.312,12.521)
C1': (-9.297,49.038,11.210)
O4': (-8.579,49.618,12.289)
C5': (-6.979,48.854,13.951)
P: (-4.470,49.332,13.379)
O2: (-10.431,48.815,8.697)
C4': (-8.324,48.610,13.300)
C2': (-9.602,47.601,11.608)
O2': (-10.844,47.542,12.280)
N1: (-8.528,49.166,9.920)
N3: (-8.518,49.160,7.537)
N4: (-6.580,49.505,6.396)
C6: (-7.177,49.408,9.930)
C5: (-6.482,49.527,8.790)
O3': (-8.677,46.245,13.398)
OP1: (-4.386,50.810,13.344)
OP2: (-4.102,48.585,14.609)
C4: (-7.206,49.396,7.566)
O5': (-5.951,48.889,12.970)
C3': (-8.420,47.312,12.521)
C1': (-9.297,49.038,11.210)
O4': (-8.579,49.618,12.289)
C5': (-6.979,48.854,13.951)
P: (-4.470,49.332,13.379)
O2: (-10.431,48.815,8.697)
C4': (-8.324,48.610,13.300)
C2': (-9.602,47.601,11.608)
O2': (-10.844,47.542,12.280)
N1: (-8.528,49.166,9.920)
N3: (-8.518,49.160,7.537)
N4: (-6.580,49.505,6.396)
C6: (-7.177,49.408,9.930)
C5: (-6.482,49.527,8.790)
O3': (-8.677,46.245,13.398)
OP1: (-2.158,53.677,2.179)
OP2: (-4.673,53.237,1.899)
C3': (-2.561,52.582,5.876)
C1': (-4.350,53.045,7.346)
C5': (-2.732,54.874,4.731)
O4': (-4.069,54.247,6.666)
C8: (-6.825,52.909,6.816)
O2': (-3.693,50.746,7.047)
C6: (-8.498,52.612,9.910)
C5: (-7.691,52.738,8.753)
C4: (-6.323,52.826,8.951)
P: (-3.564,54.116,2.350)
C4': (-2.773,54.088,6.029)
C2': (-3.872,51.974,6.372)
C2: (-6.546,52.684,11.159)
N1: (-7.882,52.588,11.117)
N3: (-5.688,52.804,10.140)
N6: (-9.832,52.515,9.863)
N7: (-7.993,52.790,7.403)
N9: (-5.771,52.936,7.687)
O5': (-3.818,54.506,3.884)
O3': (-1.447,52.164,6.661)
OP2: (-4.673,53.237,1.899)
C3': (-2.561,52.582,5.876)
C1': (-4.350,53.045,7.346)
C5': (-2.732,54.874,4.731)
O4': (-4.069,54.247,6.666)
C8: (-6.825,52.909,6.816)
O2': (-3.693,50.746,7.047)
C6: (-8.498,52.612,9.910)
C5: (-7.691,52.738,8.753)
C4: (-6.323,52.826,8.951)
P: (-3.564,54.116,2.350)
C4': (-2.773,54.088,6.029)
C2': (-3.872,51.974,6.372)
C2: (-6.546,52.684,11.159)
N1: (-7.882,52.588,11.117)
N3: (-5.688,52.804,10.140)
N6: (-9.832,52.515,9.863)
N7: (-7.993,52.790,7.403)
N9: (-5.771,52.936,7.687)
O5': (-3.818,54.506,3.884)
O3': (-1.447,52.164,6.661)
Image (generated by PyMOL):