Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0612:0613
Extra
PDB:
ATOM 1 O3' U A 611 45.820 110.686 82.815 1.00 30.22 O
ATOM 2 P U A 612 46.218 109.250 83.398 1.00 30.61 P
ATOM 3 OP1 U A 612 46.760 108.485 82.258 1.00 28.12 O
ATOM 4 OP2 U A 612 45.058 108.716 84.151 1.00 31.76 O
ATOM 5 O5' U A 612 47.380 109.562 84.445 1.00 31.01 O
ATOM 6 C5' U A 612 48.686 110.010 84.013 1.00 31.48 C
ATOM 7 C4' U A 612 49.600 110.204 85.204 1.00 31.07 C
ATOM 8 O4' U A 612 49.069 111.248 86.064 1.00 33.28 O
ATOM 9 C3' U A 612 49.725 109.011 86.133 1.00 30.08 C
ATOM 10 O3' U A 612 50.657 108.061 85.659 1.00 30.65 O
ATOM 11 C2' U A 612 50.188 109.652 87.430 1.00 29.08 C
ATOM 12 O2' U A 612 51.566 109.931 87.428 1.00 26.95 O
ATOM 13 C1' U A 612 49.395 110.959 87.420 1.00 31.10 C
ATOM 14 N1 U A 612 48.157 110.891 88.218 1.00 31.30 N
ATOM 15 C2 U A 612 48.258 111.104 89.584 1.00 32.05 C
ATOM 16 O2 U A 612 49.306 111.334 90.146 1.00 32.10 O
ATOM 17 N3 U A 612 47.080 111.023 90.277 1.00 34.15 N
ATOM 18 C4 U A 612 45.836 110.738 89.770 1.00 33.60 C
ATOM 19 O4 U A 612 44.887 110.607 90.545 1.00 32.41 O
ATOM 20 C5 U A 612 45.805 110.528 88.354 1.00 32.63 C
ATOM 21 C6 U A 612 46.937 110.615 87.642 1.00 31.97 C
ATOM 22 P U A 613 50.320 106.498 85.774 1.00 33.51 P
ATOM 23 OP1 U A 613 51.543 105.761 85.343 1.00 29.47 O
ATOM 24 OP2 U A 613 49.034 106.254 85.083 1.00 32.49 O
ATOM 25 O5' U A 613 50.075 106.262 87.332 1.00 31.80 O
TER
ATOM 1 O3' U B 612 50.657 108.061 85.659 1.00 30.65 O
ATOM 2 P U B 613 50.320 106.498 85.774 1.00 33.51 P
ATOM 3 OP1 U B 613 51.543 105.761 85.343 1.00 29.47 O
ATOM 4 OP2 U B 613 49.034 106.254 85.083 1.00 32.49 O
ATOM 5 O5' U B 613 50.075 106.262 87.332 1.00 31.80 O
ATOM 6 C5' U B 613 51.138 106.454 88.271 1.00 31.76 C
ATOM 7 C4' U B 613 50.616 106.455 89.685 1.00 31.50 C
ATOM 8 O4' U B 613 49.573 107.449 89.827 1.00 32.73 O
ATOM 9 C3' U B 613 49.885 105.226 90.182 1.00 31.53 C
ATOM 10 O3' U B 613 50.761 104.141 90.450 1.00 32.60 O
ATOM 11 C2' U B 613 49.275 105.779 91.464 1.00 31.63 C
ATOM 12 O2' U B 613 50.236 105.964 92.482 1.00 30.31 O
ATOM 13 C1' U B 613 48.832 107.168 91.002 1.00 31.75 C
ATOM 14 N1 U B 613 47.396 107.220 90.695 1.00 32.55 N
ATOM 15 C2 U B 613 46.519 107.417 91.747 1.00 34.09 C
ATOM 16 O2 U B 613 46.884 107.568 92.898 1.00 36.27 O
ATOM 17 N3 U B 613 45.195 107.425 91.406 1.00 35.16 N
ATOM 18 C4 U B 613 44.662 107.262 90.151 1.00 37.67 C
ATOM 19 O4 U B 613 43.437 107.283 90.004 1.00 40.62 O
ATOM 20 C5 U B 613 45.630 107.073 89.115 1.00 37.37 C
ATOM 21 C6 U B 613 46.930 107.061 89.416 1.00 34.57 C
ATOM 22 P U B 614 50.304 102.645 90.085 1.00 31.95 P
ATOM 23 OP1 U B 614 51.481 101.756 90.154 1.00 30.74 O
ATOM 24 OP2 U B 614 49.527 102.727 88.832 1.00 31.02 O
ATOM 25 O5' U B 614 49.321 102.249 91.273 1.00 32.90 O
TER
ATOM 2 P U A 612 46.218 109.250 83.398 1.00 30.61 P
ATOM 3 OP1 U A 612 46.760 108.485 82.258 1.00 28.12 O
ATOM 4 OP2 U A 612 45.058 108.716 84.151 1.00 31.76 O
ATOM 5 O5' U A 612 47.380 109.562 84.445 1.00 31.01 O
ATOM 6 C5' U A 612 48.686 110.010 84.013 1.00 31.48 C
ATOM 7 C4' U A 612 49.600 110.204 85.204 1.00 31.07 C
ATOM 8 O4' U A 612 49.069 111.248 86.064 1.00 33.28 O
ATOM 9 C3' U A 612 49.725 109.011 86.133 1.00 30.08 C
ATOM 10 O3' U A 612 50.657 108.061 85.659 1.00 30.65 O
ATOM 11 C2' U A 612 50.188 109.652 87.430 1.00 29.08 C
ATOM 12 O2' U A 612 51.566 109.931 87.428 1.00 26.95 O
ATOM 13 C1' U A 612 49.395 110.959 87.420 1.00 31.10 C
ATOM 14 N1 U A 612 48.157 110.891 88.218 1.00 31.30 N
ATOM 15 C2 U A 612 48.258 111.104 89.584 1.00 32.05 C
ATOM 16 O2 U A 612 49.306 111.334 90.146 1.00 32.10 O
ATOM 17 N3 U A 612 47.080 111.023 90.277 1.00 34.15 N
ATOM 18 C4 U A 612 45.836 110.738 89.770 1.00 33.60 C
ATOM 19 O4 U A 612 44.887 110.607 90.545 1.00 32.41 O
ATOM 20 C5 U A 612 45.805 110.528 88.354 1.00 32.63 C
ATOM 21 C6 U A 612 46.937 110.615 87.642 1.00 31.97 C
ATOM 22 P U A 613 50.320 106.498 85.774 1.00 33.51 P
ATOM 23 OP1 U A 613 51.543 105.761 85.343 1.00 29.47 O
ATOM 24 OP2 U A 613 49.034 106.254 85.083 1.00 32.49 O
ATOM 25 O5' U A 613 50.075 106.262 87.332 1.00 31.80 O
TER
ATOM 1 O3' U B 612 50.657 108.061 85.659 1.00 30.65 O
ATOM 2 P U B 613 50.320 106.498 85.774 1.00 33.51 P
ATOM 3 OP1 U B 613 51.543 105.761 85.343 1.00 29.47 O
ATOM 4 OP2 U B 613 49.034 106.254 85.083 1.00 32.49 O
ATOM 5 O5' U B 613 50.075 106.262 87.332 1.00 31.80 O
ATOM 6 C5' U B 613 51.138 106.454 88.271 1.00 31.76 C
ATOM 7 C4' U B 613 50.616 106.455 89.685 1.00 31.50 C
ATOM 8 O4' U B 613 49.573 107.449 89.827 1.00 32.73 O
ATOM 9 C3' U B 613 49.885 105.226 90.182 1.00 31.53 C
ATOM 10 O3' U B 613 50.761 104.141 90.450 1.00 32.60 O
ATOM 11 C2' U B 613 49.275 105.779 91.464 1.00 31.63 C
ATOM 12 O2' U B 613 50.236 105.964 92.482 1.00 30.31 O
ATOM 13 C1' U B 613 48.832 107.168 91.002 1.00 31.75 C
ATOM 14 N1 U B 613 47.396 107.220 90.695 1.00 32.55 N
ATOM 15 C2 U B 613 46.519 107.417 91.747 1.00 34.09 C
ATOM 16 O2 U B 613 46.884 107.568 92.898 1.00 36.27 O
ATOM 17 N3 U B 613 45.195 107.425 91.406 1.00 35.16 N
ATOM 18 C4 U B 613 44.662 107.262 90.151 1.00 37.67 C
ATOM 19 O4 U B 613 43.437 107.283 90.004 1.00 40.62 O
ATOM 20 C5 U B 613 45.630 107.073 89.115 1.00 37.37 C
ATOM 21 C6 U B 613 46.930 107.061 89.416 1.00 34.57 C
ATOM 22 P U B 614 50.304 102.645 90.085 1.00 31.95 P
ATOM 23 OP1 U B 614 51.481 101.756 90.154 1.00 30.74 O
ATOM 24 OP2 U B 614 49.527 102.727 88.832 1.00 31.02 O
ATOM 25 O5' U B 614 49.321 102.249 91.273 1.00 32.90 O
TER
Atoms:
C4: (45.836,110.738,89.770)
N3: (47.080,111.023,90.277)
OP1: (46.760,108.485,82.258)
OP2: (45.058,108.716,84.151)
C2: (48.258,111.104,89.584)
C1': (49.395,110.959,87.420)
C3': (49.725,109.011,86.133)
O5': (47.380,109.562,84.445)
O4': (49.069,111.248,86.064)
C5': (48.686,110.010,84.013)
P: (46.218,109.250,83.398)
C4': (49.600,110.204,85.204)
C2': (50.188,109.652,87.430)
O2': (51.566,109.931,87.428)
N1: (48.157,110.891,88.218)
O4: (44.887,110.607,90.545)
O2: (49.306,111.334,90.146)
C6: (46.937,110.615,87.642)
C5: (45.805,110.528,88.354)
O3': (50.657,108.061,85.659)
N3: (47.080,111.023,90.277)
OP1: (46.760,108.485,82.258)
OP2: (45.058,108.716,84.151)
C2: (48.258,111.104,89.584)
C1': (49.395,110.959,87.420)
C3': (49.725,109.011,86.133)
O5': (47.380,109.562,84.445)
O4': (49.069,111.248,86.064)
C5': (48.686,110.010,84.013)
P: (46.218,109.250,83.398)
C4': (49.600,110.204,85.204)
C2': (50.188,109.652,87.430)
O2': (51.566,109.931,87.428)
N1: (48.157,110.891,88.218)
O4: (44.887,110.607,90.545)
O2: (49.306,111.334,90.146)
C6: (46.937,110.615,87.642)
C5: (45.805,110.528,88.354)
O3': (50.657,108.061,85.659)
C4: (44.662,107.262,90.151)
N3: (45.195,107.425,91.406)
OP1: (51.543,105.761,85.343)
OP2: (49.034,106.254,85.083)
C2: (46.519,107.417,91.747)
C1': (48.832,107.168,91.002)
C3': (49.885,105.226,90.182)
O5': (50.075,106.262,87.332)
O4': (49.573,107.449,89.827)
C5': (51.138,106.454,88.271)
P: (50.320,106.498,85.774)
C4': (50.616,106.455,89.685)
C2': (49.275,105.779,91.464)
O2': (50.236,105.964,92.482)
N1: (47.396,107.220,90.695)
O4: (43.437,107.283,90.004)
O2: (46.884,107.568,92.898)
C6: (46.930,107.061,89.416)
C5: (45.630,107.073,89.115)
O3': (50.761,104.141,90.450)
N3: (45.195,107.425,91.406)
OP1: (51.543,105.761,85.343)
OP2: (49.034,106.254,85.083)
C2: (46.519,107.417,91.747)
C1': (48.832,107.168,91.002)
C3': (49.885,105.226,90.182)
O5': (50.075,106.262,87.332)
O4': (49.573,107.449,89.827)
C5': (51.138,106.454,88.271)
P: (50.320,106.498,85.774)
C4': (50.616,106.455,89.685)
C2': (49.275,105.779,91.464)
O2': (50.236,105.964,92.482)
N1: (47.396,107.220,90.695)
O4: (43.437,107.283,90.004)
O2: (46.884,107.568,92.898)
C6: (46.930,107.061,89.416)
C5: (45.630,107.073,89.115)
O3': (50.761,104.141,90.450)
Image (generated by PyMOL):