Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIR:A94:A41
Extra
PDB:
ATOM 1 O3' U A 93 -2.906 48.917 12.316 1.00 26.98 O
ATOM 2 P C A 94 -3.815 49.405 13.538 1.00 27.07 P
ATOM 3 OP1 C A 94 -4.155 50.830 13.298 1.00 26.64 O
ATOM 4 OP2 C A 94 -3.115 48.981 14.774 1.00 26.72 O
ATOM 5 O5' C A 94 -5.169 48.560 13.391 1.00 27.02 O
ATOM 6 C5' C A 94 -6.362 48.945 14.085 1.00 26.42 C
ATOM 7 C4' C A 94 -7.618 48.626 13.291 1.00 26.20 C
ATOM 8 O4' C A 94 -7.732 49.565 12.200 1.00 25.71 O
ATOM 9 C3' C A 94 -7.672 47.300 12.541 1.00 26.77 C
ATOM 10 O3' C A 94 -7.945 46.182 13.378 1.00 27.99 O
ATOM 11 C2' C A 94 -8.822 47.565 11.577 1.00 26.28 C
ATOM 12 O2' C A 94 -10.080 47.410 12.198 1.00 27.08 O
ATOM 13 C1' C A 94 -8.585 49.021 11.209 1.00 25.48 C
ATOM 14 N1 C A 94 -7.972 49.146 9.852 1.00 24.78 N
ATOM 15 C2 C A 94 -8.857 49.111 8.632 1.00 25.35 C
ATOM 16 O2 C A 94 -10.078 49.067 8.738 1.00 25.68 O
ATOM 17 N3 C A 94 -8.265 49.241 7.412 1.00 25.25 N
ATOM 18 C4 C A 94 -6.900 49.381 7.357 1.00 24.90 C
ATOM 19 N4 C A 94 -6.377 49.498 6.130 1.00 25.43 N
ATOM 20 C5 C A 94 -5.953 49.455 8.599 1.00 24.65 C
ATOM 21 C6 C A 94 -6.547 49.330 9.793 1.00 24.51 C
ATOM 22 P C A 95 -7.486 44.723 12.892 1.00 29.27 P
ATOM 23 OP1 C A 95 -7.657 43.766 14.011 1.00 29.40 O
ATOM 24 OP2 C A 95 -6.160 44.835 12.242 1.00 28.68 O
ATOM 25 O5' C A 95 -8.562 44.413 11.755 1.00 30.46 O
TER
ATOM 1 O3' C B 40 -3.138 55.809 1.976 1.00 36.52 O
ATOM 2 P A B 41 -3.105 54.283 2.479 1.00 34.69 P
ATOM 3 OP1 A B 41 -1.733 53.770 2.254 1.00 34.76 O
ATOM 4 OP2 A B 41 -4.258 53.589 1.861 1.00 34.54 O
ATOM 5 O5' A B 41 -3.354 54.376 4.060 1.00 33.27 O
ATOM 6 C5' A B 41 -2.314 54.786 4.945 1.00 31.05 C
ATOM 7 C4' A B 41 -2.290 53.920 6.194 1.00 30.09 C
ATOM 8 O4' A B 41 -3.548 54.028 6.913 1.00 29.02 O
ATOM 9 C3' A B 41 -2.063 52.426 5.949 1.00 29.95 C
ATOM 10 O3' A B 41 -0.949 51.959 6.733 1.00 31.10 O
ATOM 11 C2' A B 41 -3.398 51.790 6.350 1.00 28.83 C
ATOM 12 O2' A B 41 -3.271 50.488 6.886 1.00 28.75 O
ATOM 13 C1' A B 41 -3.889 52.758 7.421 1.00 27.31 C
ATOM 14 N9 A B 41 -5.329 52.712 7.670 1.00 25.96 N
ATOM 15 C8 A B 41 -6.331 52.675 6.737 1.00 25.52 C
ATOM 16 N7 A B 41 -7.538 52.636 7.251 1.00 25.14 N
ATOM 17 C5 A B 41 -7.313 52.651 8.618 1.00 24.63 C
ATOM 18 C6 A B 41 -8.186 52.630 9.726 1.00 24.18 C
ATOM 19 N6 A B 41 -9.515 52.588 9.612 1.00 25.04 N
ATOM 20 N1 A B 41 -7.648 52.659 10.962 1.00 23.78 N
ATOM 21 C2 A B 41 -6.315 52.702 11.075 1.00 24.22 C
ATOM 22 N3 A B 41 -5.393 52.725 10.111 1.00 24.54 N
ATOM 23 C4 A B 41 -5.960 52.703 8.893 1.00 24.92 C
ATOM 24 P G B 42 0.556 52.176 6.219 1.00 31.65 P
ATOM 25 OP1 G B 42 1.009 53.513 6.662 1.00 32.23 O
ATOM 26 OP2 G B 42 0.593 51.824 4.779 1.00 31.49 O
ATOM 27 O5' G B 42 1.388 51.093 7.042 1.00 32.11 O
TER
ATOM 2 P C A 94 -3.815 49.405 13.538 1.00 27.07 P
ATOM 3 OP1 C A 94 -4.155 50.830 13.298 1.00 26.64 O
ATOM 4 OP2 C A 94 -3.115 48.981 14.774 1.00 26.72 O
ATOM 5 O5' C A 94 -5.169 48.560 13.391 1.00 27.02 O
ATOM 6 C5' C A 94 -6.362 48.945 14.085 1.00 26.42 C
ATOM 7 C4' C A 94 -7.618 48.626 13.291 1.00 26.20 C
ATOM 8 O4' C A 94 -7.732 49.565 12.200 1.00 25.71 O
ATOM 9 C3' C A 94 -7.672 47.300 12.541 1.00 26.77 C
ATOM 10 O3' C A 94 -7.945 46.182 13.378 1.00 27.99 O
ATOM 11 C2' C A 94 -8.822 47.565 11.577 1.00 26.28 C
ATOM 12 O2' C A 94 -10.080 47.410 12.198 1.00 27.08 O
ATOM 13 C1' C A 94 -8.585 49.021 11.209 1.00 25.48 C
ATOM 14 N1 C A 94 -7.972 49.146 9.852 1.00 24.78 N
ATOM 15 C2 C A 94 -8.857 49.111 8.632 1.00 25.35 C
ATOM 16 O2 C A 94 -10.078 49.067 8.738 1.00 25.68 O
ATOM 17 N3 C A 94 -8.265 49.241 7.412 1.00 25.25 N
ATOM 18 C4 C A 94 -6.900 49.381 7.357 1.00 24.90 C
ATOM 19 N4 C A 94 -6.377 49.498 6.130 1.00 25.43 N
ATOM 20 C5 C A 94 -5.953 49.455 8.599 1.00 24.65 C
ATOM 21 C6 C A 94 -6.547 49.330 9.793 1.00 24.51 C
ATOM 22 P C A 95 -7.486 44.723 12.892 1.00 29.27 P
ATOM 23 OP1 C A 95 -7.657 43.766 14.011 1.00 29.40 O
ATOM 24 OP2 C A 95 -6.160 44.835 12.242 1.00 28.68 O
ATOM 25 O5' C A 95 -8.562 44.413 11.755 1.00 30.46 O
TER
ATOM 1 O3' C B 40 -3.138 55.809 1.976 1.00 36.52 O
ATOM 2 P A B 41 -3.105 54.283 2.479 1.00 34.69 P
ATOM 3 OP1 A B 41 -1.733 53.770 2.254 1.00 34.76 O
ATOM 4 OP2 A B 41 -4.258 53.589 1.861 1.00 34.54 O
ATOM 5 O5' A B 41 -3.354 54.376 4.060 1.00 33.27 O
ATOM 6 C5' A B 41 -2.314 54.786 4.945 1.00 31.05 C
ATOM 7 C4' A B 41 -2.290 53.920 6.194 1.00 30.09 C
ATOM 8 O4' A B 41 -3.548 54.028 6.913 1.00 29.02 O
ATOM 9 C3' A B 41 -2.063 52.426 5.949 1.00 29.95 C
ATOM 10 O3' A B 41 -0.949 51.959 6.733 1.00 31.10 O
ATOM 11 C2' A B 41 -3.398 51.790 6.350 1.00 28.83 C
ATOM 12 O2' A B 41 -3.271 50.488 6.886 1.00 28.75 O
ATOM 13 C1' A B 41 -3.889 52.758 7.421 1.00 27.31 C
ATOM 14 N9 A B 41 -5.329 52.712 7.670 1.00 25.96 N
ATOM 15 C8 A B 41 -6.331 52.675 6.737 1.00 25.52 C
ATOM 16 N7 A B 41 -7.538 52.636 7.251 1.00 25.14 N
ATOM 17 C5 A B 41 -7.313 52.651 8.618 1.00 24.63 C
ATOM 18 C6 A B 41 -8.186 52.630 9.726 1.00 24.18 C
ATOM 19 N6 A B 41 -9.515 52.588 9.612 1.00 25.04 N
ATOM 20 N1 A B 41 -7.648 52.659 10.962 1.00 23.78 N
ATOM 21 C2 A B 41 -6.315 52.702 11.075 1.00 24.22 C
ATOM 22 N3 A B 41 -5.393 52.725 10.111 1.00 24.54 N
ATOM 23 C4 A B 41 -5.960 52.703 8.893 1.00 24.92 C
ATOM 24 P G B 42 0.556 52.176 6.219 1.00 31.65 P
ATOM 25 OP1 G B 42 1.009 53.513 6.662 1.00 32.23 O
ATOM 26 OP2 G B 42 0.593 51.824 4.779 1.00 31.49 O
ATOM 27 O5' G B 42 1.388 51.093 7.042 1.00 32.11 O
TER
Atoms:
C2: (-8.857,49.111,8.632)
OP1: (-4.155,50.830,13.298)
OP2: (-3.115,48.981,14.774)
C4: (-6.900,49.381,7.357)
O5': (-5.169,48.560,13.391)
C3': (-7.672,47.300,12.541)
C1': (-8.585,49.021,11.209)
O4': (-7.732,49.565,12.200)
C5': (-6.362,48.945,14.085)
P: (-3.815,49.405,13.538)
O2: (-10.078,49.067,8.738)
C4': (-7.618,48.626,13.291)
C2': (-8.822,47.565,11.577)
O2': (-10.080,47.410,12.198)
N1: (-7.972,49.146,9.852)
N3: (-8.265,49.241,7.412)
N4: (-6.377,49.498,6.130)
C6: (-6.547,49.330,9.793)
C5: (-5.953,49.455,8.599)
O3': (-7.945,46.182,13.378)
OP1: (-4.155,50.830,13.298)
OP2: (-3.115,48.981,14.774)
C4: (-6.900,49.381,7.357)
O5': (-5.169,48.560,13.391)
C3': (-7.672,47.300,12.541)
C1': (-8.585,49.021,11.209)
O4': (-7.732,49.565,12.200)
C5': (-6.362,48.945,14.085)
P: (-3.815,49.405,13.538)
O2: (-10.078,49.067,8.738)
C4': (-7.618,48.626,13.291)
C2': (-8.822,47.565,11.577)
O2': (-10.080,47.410,12.198)
N1: (-7.972,49.146,9.852)
N3: (-8.265,49.241,7.412)
N4: (-6.377,49.498,6.130)
C6: (-6.547,49.330,9.793)
C5: (-5.953,49.455,8.599)
O3': (-7.945,46.182,13.378)
OP1: (-1.733,53.770,2.254)
OP2: (-4.258,53.589,1.861)
C3': (-2.063,52.426,5.949)
C1': (-3.889,52.758,7.421)
C5': (-2.314,54.786,4.945)
O4': (-3.548,54.028,6.913)
C8: (-6.331,52.675,6.737)
O2': (-3.271,50.488,6.886)
C6: (-8.186,52.630,9.726)
C5: (-7.313,52.651,8.618)
C4: (-5.960,52.703,8.893)
P: (-3.105,54.283,2.479)
C4': (-2.290,53.920,6.194)
C2': (-3.398,51.790,6.350)
C2: (-6.315,52.702,11.075)
N1: (-7.648,52.659,10.962)
N3: (-5.393,52.725,10.111)
N6: (-9.515,52.588,9.612)
N7: (-7.538,52.636,7.251)
N9: (-5.329,52.712,7.670)
O5': (-3.354,54.376,4.060)
O3': (-0.949,51.959,6.733)
OP2: (-4.258,53.589,1.861)
C3': (-2.063,52.426,5.949)
C1': (-3.889,52.758,7.421)
C5': (-2.314,54.786,4.945)
O4': (-3.548,54.028,6.913)
C8: (-6.331,52.675,6.737)
O2': (-3.271,50.488,6.886)
C6: (-8.186,52.630,9.726)
C5: (-7.313,52.651,8.618)
C4: (-5.960,52.703,8.893)
P: (-3.105,54.283,2.479)
C4': (-2.290,53.920,6.194)
C2': (-3.398,51.790,6.350)
C2: (-6.315,52.702,11.075)
N1: (-7.648,52.659,10.962)
N3: (-5.393,52.725,10.111)
N6: (-9.515,52.588,9.612)
N7: (-7.538,52.636,7.251)
N9: (-5.329,52.712,7.670)
O5': (-3.354,54.376,4.060)
O3': (-0.949,51.959,6.733)
Image (generated by PyMOL):