Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIX:A94:A41
Extra
PDB:
ATOM 1 O3' U A 93 -3.715 48.824 12.111 1.00 32.79 O
ATOM 2 P C A 94 -4.540 49.426 13.338 1.00 33.21 P
ATOM 3 OP1 C A 94 -4.504 50.903 13.243 1.00 33.01 O
ATOM 4 OP2 C A 94 -4.063 48.747 14.568 1.00 33.35 O
ATOM 5 O5' C A 94 -6.030 48.934 13.018 1.00 33.23 O
ATOM 6 C5' C A 94 -7.064 49.061 13.992 1.00 33.47 C
ATOM 7 C4' C A 94 -8.415 48.689 13.410 1.00 33.38 C
ATOM 8 O4' C A 94 -8.771 49.652 12.384 1.00 33.12 O
ATOM 9 C3' C A 94 -8.483 47.354 12.683 1.00 33.69 C
ATOM 10 O3' C A 94 -8.660 46.263 13.575 1.00 34.80 O
ATOM 11 C2' C A 94 -9.701 47.573 11.795 1.00 33.53 C
ATOM 12 O2' C A 94 -10.918 47.494 12.509 1.00 34.43 O
ATOM 13 C1' C A 94 -9.472 49.004 11.333 1.00 32.57 C
ATOM 14 N1 C A 94 -8.729 49.116 10.018 1.00 31.82 N
ATOM 15 C2 C A 94 -9.438 49.072 8.801 1.00 31.51 C
ATOM 16 O2 C A 94 -10.668 48.938 8.801 1.00 31.80 O
ATOM 17 N3 C A 94 -8.748 49.181 7.635 1.00 31.11 N
ATOM 18 C4 C A 94 -7.419 49.329 7.650 1.00 30.69 C
ATOM 19 N4 C A 94 -6.783 49.431 6.482 1.00 31.16 N
ATOM 20 C5 C A 94 -6.678 49.375 8.865 1.00 30.66 C
ATOM 21 C6 C A 94 -7.367 49.268 10.007 1.00 31.16 C
ATOM 22 P C A 95 -8.221 44.787 13.121 1.00 36.05 P
ATOM 23 OP1 C A 95 -8.402 43.868 14.269 1.00 36.56 O
ATOM 24 OP2 C A 95 -6.883 44.844 12.478 1.00 35.60 O
ATOM 25 O5' C A 95 -9.317 44.471 12.000 1.00 35.96 O
TER
ATOM 1 O3' C B 40 -4.072 55.561 1.707 1.00 37.59 O
ATOM 2 P A B 41 -3.961 54.194 2.528 1.00 36.22 P
ATOM 3 OP1 A B 41 -2.655 53.577 2.193 1.00 36.22 O
ATOM 4 OP2 A B 41 -5.215 53.428 2.327 1.00 36.05 O
ATOM 5 O5' A B 41 -3.930 54.723 4.042 1.00 34.85 O
ATOM 6 C5' A B 41 -2.728 54.709 4.808 1.00 32.07 C
ATOM 7 C4' A B 41 -2.907 53.869 6.056 1.00 29.79 C
ATOM 8 O4' A B 41 -4.234 54.065 6.602 1.00 28.78 O
ATOM 9 C3' A B 41 -2.764 52.364 5.839 1.00 29.49 C
ATOM 10 O3' A B 41 -1.633 51.849 6.562 1.00 30.77 O
ATOM 11 C2' A B 41 -4.083 51.790 6.366 1.00 28.43 C
ATOM 12 O2' A B 41 -3.930 50.592 7.101 1.00 28.43 O
ATOM 13 C1' A B 41 -4.544 52.889 7.309 1.00 27.14 C
ATOM 14 N9 A B 41 -5.965 52.817 7.655 1.00 25.74 N
ATOM 15 C8 A B 41 -7.017 52.762 6.789 1.00 25.02 C
ATOM 16 N7 A B 41 -8.185 52.693 7.378 1.00 24.79 N
ATOM 17 C5 A B 41 -7.884 52.701 8.726 1.00 24.38 C
ATOM 18 C6 A B 41 -8.696 52.646 9.877 1.00 23.93 C
ATOM 19 N6 A B 41 -10.027 52.571 9.819 1.00 24.87 N
ATOM 20 N1 A B 41 -8.091 52.674 11.084 1.00 23.50 N
ATOM 21 C2 A B 41 -6.754 52.752 11.127 1.00 23.95 C
ATOM 22 N3 A B 41 -5.885 52.805 10.112 1.00 24.38 N
ATOM 23 C4 A B 41 -6.518 52.778 8.921 1.00 24.82 C
ATOM 24 P G B 42 -0.129 52.227 6.154 1.00 30.70 P
ATOM 25 OP1 G B 42 0.099 53.637 6.552 1.00 31.25 O
ATOM 26 OP2 G B 42 0.043 51.820 4.741 1.00 30.94 O
ATOM 27 O5' G B 42 0.785 51.281 7.061 1.00 30.11 O
TER
ATOM 2 P C A 94 -4.540 49.426 13.338 1.00 33.21 P
ATOM 3 OP1 C A 94 -4.504 50.903 13.243 1.00 33.01 O
ATOM 4 OP2 C A 94 -4.063 48.747 14.568 1.00 33.35 O
ATOM 5 O5' C A 94 -6.030 48.934 13.018 1.00 33.23 O
ATOM 6 C5' C A 94 -7.064 49.061 13.992 1.00 33.47 C
ATOM 7 C4' C A 94 -8.415 48.689 13.410 1.00 33.38 C
ATOM 8 O4' C A 94 -8.771 49.652 12.384 1.00 33.12 O
ATOM 9 C3' C A 94 -8.483 47.354 12.683 1.00 33.69 C
ATOM 10 O3' C A 94 -8.660 46.263 13.575 1.00 34.80 O
ATOM 11 C2' C A 94 -9.701 47.573 11.795 1.00 33.53 C
ATOM 12 O2' C A 94 -10.918 47.494 12.509 1.00 34.43 O
ATOM 13 C1' C A 94 -9.472 49.004 11.333 1.00 32.57 C
ATOM 14 N1 C A 94 -8.729 49.116 10.018 1.00 31.82 N
ATOM 15 C2 C A 94 -9.438 49.072 8.801 1.00 31.51 C
ATOM 16 O2 C A 94 -10.668 48.938 8.801 1.00 31.80 O
ATOM 17 N3 C A 94 -8.748 49.181 7.635 1.00 31.11 N
ATOM 18 C4 C A 94 -7.419 49.329 7.650 1.00 30.69 C
ATOM 19 N4 C A 94 -6.783 49.431 6.482 1.00 31.16 N
ATOM 20 C5 C A 94 -6.678 49.375 8.865 1.00 30.66 C
ATOM 21 C6 C A 94 -7.367 49.268 10.007 1.00 31.16 C
ATOM 22 P C A 95 -8.221 44.787 13.121 1.00 36.05 P
ATOM 23 OP1 C A 95 -8.402 43.868 14.269 1.00 36.56 O
ATOM 24 OP2 C A 95 -6.883 44.844 12.478 1.00 35.60 O
ATOM 25 O5' C A 95 -9.317 44.471 12.000 1.00 35.96 O
TER
ATOM 1 O3' C B 40 -4.072 55.561 1.707 1.00 37.59 O
ATOM 2 P A B 41 -3.961 54.194 2.528 1.00 36.22 P
ATOM 3 OP1 A B 41 -2.655 53.577 2.193 1.00 36.22 O
ATOM 4 OP2 A B 41 -5.215 53.428 2.327 1.00 36.05 O
ATOM 5 O5' A B 41 -3.930 54.723 4.042 1.00 34.85 O
ATOM 6 C5' A B 41 -2.728 54.709 4.808 1.00 32.07 C
ATOM 7 C4' A B 41 -2.907 53.869 6.056 1.00 29.79 C
ATOM 8 O4' A B 41 -4.234 54.065 6.602 1.00 28.78 O
ATOM 9 C3' A B 41 -2.764 52.364 5.839 1.00 29.49 C
ATOM 10 O3' A B 41 -1.633 51.849 6.562 1.00 30.77 O
ATOM 11 C2' A B 41 -4.083 51.790 6.366 1.00 28.43 C
ATOM 12 O2' A B 41 -3.930 50.592 7.101 1.00 28.43 O
ATOM 13 C1' A B 41 -4.544 52.889 7.309 1.00 27.14 C
ATOM 14 N9 A B 41 -5.965 52.817 7.655 1.00 25.74 N
ATOM 15 C8 A B 41 -7.017 52.762 6.789 1.00 25.02 C
ATOM 16 N7 A B 41 -8.185 52.693 7.378 1.00 24.79 N
ATOM 17 C5 A B 41 -7.884 52.701 8.726 1.00 24.38 C
ATOM 18 C6 A B 41 -8.696 52.646 9.877 1.00 23.93 C
ATOM 19 N6 A B 41 -10.027 52.571 9.819 1.00 24.87 N
ATOM 20 N1 A B 41 -8.091 52.674 11.084 1.00 23.50 N
ATOM 21 C2 A B 41 -6.754 52.752 11.127 1.00 23.95 C
ATOM 22 N3 A B 41 -5.885 52.805 10.112 1.00 24.38 N
ATOM 23 C4 A B 41 -6.518 52.778 8.921 1.00 24.82 C
ATOM 24 P G B 42 -0.129 52.227 6.154 1.00 30.70 P
ATOM 25 OP1 G B 42 0.099 53.637 6.552 1.00 31.25 O
ATOM 26 OP2 G B 42 0.043 51.820 4.741 1.00 30.94 O
ATOM 27 O5' G B 42 0.785 51.281 7.061 1.00 30.11 O
TER
Atoms:
C2: (-9.438,49.072,8.801)
OP1: (-4.504,50.903,13.243)
OP2: (-4.063,48.747,14.568)
C4: (-7.419,49.329,7.650)
O5': (-6.030,48.934,13.018)
C3': (-8.483,47.354,12.683)
C1': (-9.472,49.004,11.333)
O4': (-8.771,49.652,12.384)
C5': (-7.064,49.061,13.992)
P: (-4.540,49.426,13.338)
O2: (-10.668,48.938,8.801)
C4': (-8.415,48.689,13.410)
C2': (-9.701,47.573,11.795)
O2': (-10.918,47.494,12.509)
N1: (-8.729,49.116,10.018)
N3: (-8.748,49.181,7.635)
N4: (-6.783,49.431,6.482)
C6: (-7.367,49.268,10.007)
C5: (-6.678,49.375,8.865)
O3': (-8.660,46.263,13.575)
OP1: (-4.504,50.903,13.243)
OP2: (-4.063,48.747,14.568)
C4: (-7.419,49.329,7.650)
O5': (-6.030,48.934,13.018)
C3': (-8.483,47.354,12.683)
C1': (-9.472,49.004,11.333)
O4': (-8.771,49.652,12.384)
C5': (-7.064,49.061,13.992)
P: (-4.540,49.426,13.338)
O2: (-10.668,48.938,8.801)
C4': (-8.415,48.689,13.410)
C2': (-9.701,47.573,11.795)
O2': (-10.918,47.494,12.509)
N1: (-8.729,49.116,10.018)
N3: (-8.748,49.181,7.635)
N4: (-6.783,49.431,6.482)
C6: (-7.367,49.268,10.007)
C5: (-6.678,49.375,8.865)
O3': (-8.660,46.263,13.575)
OP1: (-2.655,53.577,2.193)
OP2: (-5.215,53.428,2.327)
C3': (-2.764,52.364,5.839)
C1': (-4.544,52.889,7.309)
C5': (-2.728,54.709,4.808)
O4': (-4.234,54.065,6.602)
C8: (-7.017,52.762,6.789)
O2': (-3.930,50.592,7.101)
C6: (-8.696,52.646,9.877)
C5: (-7.884,52.701,8.726)
C4: (-6.518,52.778,8.921)
P: (-3.961,54.194,2.528)
C4': (-2.907,53.869,6.056)
C2': (-4.083,51.790,6.366)
C2: (-6.754,52.752,11.127)
N1: (-8.091,52.674,11.084)
N3: (-5.885,52.805,10.112)
N6: (-10.027,52.571,9.819)
N7: (-8.185,52.693,7.378)
N9: (-5.965,52.817,7.655)
O5': (-3.930,54.723,4.042)
O3': (-1.633,51.849,6.562)
OP2: (-5.215,53.428,2.327)
C3': (-2.764,52.364,5.839)
C1': (-4.544,52.889,7.309)
C5': (-2.728,54.709,4.808)
O4': (-4.234,54.065,6.602)
C8: (-7.017,52.762,6.789)
O2': (-3.930,50.592,7.101)
C6: (-8.696,52.646,9.877)
C5: (-7.884,52.701,8.726)
C4: (-6.518,52.778,8.921)
P: (-3.961,54.194,2.528)
C4': (-2.907,53.869,6.056)
C2': (-4.083,51.790,6.366)
C2: (-6.754,52.752,11.127)
N1: (-8.091,52.674,11.084)
N3: (-5.885,52.805,10.112)
N6: (-10.027,52.571,9.819)
N7: (-8.185,52.693,7.378)
N9: (-5.965,52.817,7.655)
O5': (-3.930,54.723,4.042)
O3': (-1.633,51.849,6.562)
Image (generated by PyMOL):