ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1916:A1904

Extra

PDB:
ATOM 1 O3' A A1915 119.748 102.380 95.781 1.00 64.09 O
ATOM 2 P G A1916 119.826 101.798 97.292 1.00 64.61 P
ATOM 3 OP1 G A1916 121.126 102.230 97.866 1.00 62.15 O
ATOM 4 OP2 G A1916 119.495 100.352 97.212 1.00 63.37 O
ATOM 5 O5' G A1916 118.657 102.515 98.111 1.00 64.97 O
ATOM 6 C5' G A1916 118.583 103.953 98.215 1.00 65.03 C
ATOM 7 C4' G A1916 117.386 104.365 99.038 1.00 64.57 C
ATOM 8 O4' G A1916 116.179 104.085 98.274 1.00 65.03 O
ATOM 9 C3' G A1916 117.257 103.646 100.383 1.00 65.22 C
ATOM 10 O3' G A1916 116.837 104.517 101.460 1.00 64.68 O
ATOM 11 C2' G A1916 116.153 102.622 100.089 1.00 67.12 C
ATOM 12 O2' G A1916 115.335 102.276 101.183 1.00 68.29 O
ATOM 13 C1' G A1916 115.289 103.370 99.084 1.00 67.64 C
ATOM 14 N9 G A1916 114.386 102.544 98.278 1.00 70.05 N
ATOM 15 C8 G A1916 113.044 102.796 98.080 1.00 71.49 C
ATOM 16 N7 G A1916 112.441 101.875 97.378 1.00 72.13 N
ATOM 17 C5 G A1916 113.443 100.961 97.075 1.00 71.87 C
ATOM 18 C6 G A1916 113.383 99.756 96.334 1.00 72.60 C
ATOM 19 O6 G A1916 112.394 99.230 95.792 1.00 72.84 O
ATOM 20 N1 G A1916 114.635 99.146 96.251 1.00 73.11 N
ATOM 21 C2 G A1916 115.795 99.629 96.810 1.00 71.71 C
ATOM 22 N2 G A1916 116.898 98.897 96.585 1.00 73.22 N
ATOM 23 N3 G A1916 115.863 100.746 97.522 1.00 70.19 N
ATOM 24 C4 G A1916 114.658 101.361 97.610 1.00 70.65 C
ATOM 25 P G A1917 117.635 105.891 101.781 1.00 64.02 P
ATOM 26 OP1 G A1917 119.035 105.764 101.298 1.00 63.22 O
ATOM 27 OP2 G A1917 117.382 106.267 103.195 1.00 62.11 O
ATOM 28 O5' G A1917 116.842 106.957 100.899 1.00 65.61 O
TER

ATOM 1 O3' G B1903 107.706 106.746 94.665 1.00 58.52 O
ATOM 2 P C B1904 107.726 107.525 96.066 1.00 60.35 P
ATOM 3 OP1 C B1904 106.757 106.925 97.013 1.00 60.05 O
ATOM 4 OP2 C B1904 107.655 108.980 95.765 1.00 62.05 O
ATOM 5 O5' C B1904 109.178 107.214 96.621 1.00 62.65 O
ATOM 6 C5' C B1904 109.685 105.867 96.654 1.00 67.04 C
ATOM 7 C4' C B1904 111.123 105.887 97.100 1.00 69.81 C
ATOM 8 O4' C B1904 111.914 106.506 96.064 1.00 70.28 O
ATOM 9 C3' C B1904 111.352 106.752 98.330 1.00 71.12 C
ATOM 10 O3' C B1904 111.193 105.966 99.494 1.00 75.52 O
ATOM 11 C2' C B1904 112.781 107.253 98.171 1.00 69.77 C
ATOM 12 O2' C B1904 113.772 106.416 98.722 1.00 68.20 O
ATOM 13 C1' C B1904 112.913 107.311 96.650 1.00 70.33 C
ATOM 14 N1 C B1904 112.798 108.662 96.116 1.00 70.89 N
ATOM 15 C2 C B1904 113.923 109.443 96.148 1.00 70.95 C
ATOM 16 O2 C B1904 114.958 108.955 96.626 1.00 70.45 O
ATOM 17 N3 C B1904 113.870 110.702 95.665 1.00 71.73 N
ATOM 18 C4 C B1904 112.724 111.176 95.163 1.00 71.61 C
ATOM 19 N4 C B1904 112.715 112.423 94.693 1.00 71.78 N
ATOM 20 C5 C B1904 111.542 110.389 95.121 1.00 71.42 C
ATOM 21 C6 C B1904 111.623 109.146 95.605 1.00 71.66 C
ATOM 22 P G B1905 110.324 106.518 100.716 1.00 78.94 P
ATOM 23 OP1 G B1905 109.508 107.652 100.215 1.00 79.04 O
ATOM 24 OP2 G B1905 111.222 106.708 101.890 1.00 78.20 O
ATOM 25 O5' G B1905 109.326 105.320 101.016 1.00 82.08 O
TER

Atoms:
OP1: (121.126,102.230,97.866)
OP2: (119.495,100.352,97.212)
C3': (117.257,103.646,100.383)
C1': (115.289,103.370,99.084)
C5': (118.583,103.953,98.215)
O6: (112.394,99.230,95.792)
O4': (116.179,104.085,98.274)
C8: (113.044,102.796,98.080)
C2: (115.795,99.629,96.810)
C6: (113.383,99.756,96.334)
C5: (113.443,100.961,97.075)
C4: (114.658,101.361,97.610)
P: (119.826,101.798,97.292)
C4': (117.386,104.365,99.038)
C2': (116.153,102.622,100.089)
O2': (115.335,102.276,101.183)
N1: (114.635,99.146,96.251)
N2: (116.898,98.897,96.585)
N3: (115.863,100.746,97.522)
N7: (112.441,101.875,97.378)
N9: (114.386,102.544,98.278)
O5': (118.657,102.515,98.111)
O3': (116.837,104.517,101.460)
C2: (113.923,109.443,96.148)
OP1: (106.757,106.925,97.013)
OP2: (107.655,108.980,95.765)
C4: (112.724,111.176,95.163)
O5': (109.178,107.214,96.621)
C3': (111.352,106.752,98.330)
C1': (112.913,107.311,96.650)
O4': (111.914,106.506,96.064)
C5': (109.685,105.867,96.654)
P: (107.726,107.525,96.066)
O2: (114.958,108.955,96.626)
C4': (111.123,105.887,97.100)
C2': (112.781,107.253,98.171)
O2': (113.772,106.416,98.722)
N1: (112.798,108.662,96.116)
N3: (113.870,110.702,95.665)
N4: (112.715,112.423,94.693)
C6: (111.623,109.146,95.605)
C5: (111.542,110.389,95.121)
O3': (111.193,105.966,99.494)
Image (generated by PyMOL):
PyMOL image
show in jmol