Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2018:A2017
Extra
PDB:
ATOM 1 O3' C A2017 48.901 111.066 103.682 1.00 38.89 O
ATOM 2 P G A2018 48.091 111.741 104.902 1.00 43.34 P
ATOM 3 OP1 G A2018 47.315 110.670 105.573 1.00 41.56 O
ATOM 4 OP2 G A2018 47.410 112.995 104.465 1.00 41.08 O
ATOM 5 O5' G A2018 49.248 112.215 105.877 1.00 40.70 O
ATOM 6 C5' G A2018 49.172 112.016 107.290 1.00 38.76 C
ATOM 7 C4' G A2018 50.524 111.651 107.817 1.00 37.70 C
ATOM 8 O4' G A2018 50.744 110.229 107.695 1.00 36.33 O
ATOM 9 C3' G A2018 51.660 112.339 107.078 1.00 37.38 C
ATOM 10 O3' G A2018 52.624 112.741 108.030 1.00 39.66 O
ATOM 11 C2' G A2018 52.194 111.241 106.157 1.00 35.96 C
ATOM 12 O2' G A2018 53.563 111.395 105.877 1.00 33.82 O
ATOM 13 C1' G A2018 51.945 109.995 106.997 1.00 36.17 C
ATOM 14 N9 G A2018 51.805 108.736 106.273 1.00 36.93 N
ATOM 15 C8 G A2018 50.754 108.352 105.473 1.00 36.14 C
ATOM 16 N7 G A2018 50.884 107.143 104.997 1.00 34.71 N
ATOM 17 C5 G A2018 52.105 106.706 105.498 1.00 36.81 C
ATOM 18 C6 G A2018 52.783 105.461 105.339 1.00 37.21 C
ATOM 19 O6 G A2018 52.437 104.465 104.684 1.00 39.03 O
ATOM 20 N1 G A2018 53.977 105.440 106.053 1.00 34.89 N
ATOM 21 C2 G A2018 54.456 106.465 106.819 1.00 33.54 C
ATOM 22 N2 G A2018 55.602 106.235 107.445 1.00 33.32 N
ATOM 23 N3 G A2018 53.854 107.623 106.967 1.00 34.49 N
ATOM 24 C4 G A2018 52.688 107.678 106.287 1.00 36.99 C
ATOM 25 P G A2019 52.953 114.300 108.236 1.00 39.00 P
ATOM 26 OP1 G A2019 53.728 114.730 107.055 1.00 37.70 O
ATOM 27 OP2 G A2019 53.511 114.489 109.590 1.00 39.79 O
ATOM 28 O5' G A2019 51.548 115.040 108.220 1.00 38.38 O
TER
ATOM 1 O3' G B2016 44.059 108.539 104.279 1.00 27.36 O
ATOM 2 P C B2017 45.300 107.543 104.117 1.00 28.39 P
ATOM 3 OP1 C B2017 44.944 106.467 103.192 1.00 27.89 O
ATOM 4 OP2 C B2017 45.818 107.221 105.456 1.00 28.40 O
ATOM 5 O5' C B2017 46.378 108.419 103.383 1.00 26.97 O
ATOM 6 C5' C B2017 47.730 108.061 103.451 1.00 30.92 C
ATOM 7 C4' C B2017 48.522 108.965 102.564 1.00 35.33 C
ATOM 8 O4' C B2017 48.314 108.628 101.187 1.00 36.21 O
ATOM 9 C3' C B2017 48.201 110.450 102.611 1.00 36.33 C
ATOM 10 O3' C B2017 48.901 111.066 103.682 1.00 38.89 O
ATOM 11 C2' C B2017 48.759 110.965 101.286 1.00 36.72 C
ATOM 12 O2' C B2017 50.104 111.343 101.434 1.00 38.48 O
ATOM 13 C1' C B2017 48.749 109.709 100.416 1.00 36.75 C
ATOM 14 N1 C B2017 48.004 109.751 99.160 1.00 36.41 N
ATOM 15 C2 C B2017 48.720 109.584 97.986 1.00 37.71 C
ATOM 16 O2 C B2017 49.941 109.407 98.056 1.00 40.12 O
ATOM 17 N3 C B2017 48.077 109.622 96.805 1.00 37.25 N
ATOM 18 C4 C B2017 46.762 109.821 96.774 1.00 36.46 C
ATOM 19 N4 C B2017 46.171 109.854 95.585 1.00 34.33 N
ATOM 20 C5 C B2017 45.998 109.996 97.966 1.00 35.69 C
ATOM 21 C6 C B2017 46.656 109.951 99.127 1.00 35.05 C
ATOM 22 P G B2018 48.091 111.741 104.902 1.00 43.34 P
ATOM 23 OP1 G B2018 47.315 110.670 105.573 1.00 41.56 O
ATOM 24 OP2 G B2018 47.410 112.995 104.465 1.00 41.08 O
ATOM 25 O5' G B2018 49.248 112.215 105.877 1.00 40.70 O
TER
ATOM 2 P G A2018 48.091 111.741 104.902 1.00 43.34 P
ATOM 3 OP1 G A2018 47.315 110.670 105.573 1.00 41.56 O
ATOM 4 OP2 G A2018 47.410 112.995 104.465 1.00 41.08 O
ATOM 5 O5' G A2018 49.248 112.215 105.877 1.00 40.70 O
ATOM 6 C5' G A2018 49.172 112.016 107.290 1.00 38.76 C
ATOM 7 C4' G A2018 50.524 111.651 107.817 1.00 37.70 C
ATOM 8 O4' G A2018 50.744 110.229 107.695 1.00 36.33 O
ATOM 9 C3' G A2018 51.660 112.339 107.078 1.00 37.38 C
ATOM 10 O3' G A2018 52.624 112.741 108.030 1.00 39.66 O
ATOM 11 C2' G A2018 52.194 111.241 106.157 1.00 35.96 C
ATOM 12 O2' G A2018 53.563 111.395 105.877 1.00 33.82 O
ATOM 13 C1' G A2018 51.945 109.995 106.997 1.00 36.17 C
ATOM 14 N9 G A2018 51.805 108.736 106.273 1.00 36.93 N
ATOM 15 C8 G A2018 50.754 108.352 105.473 1.00 36.14 C
ATOM 16 N7 G A2018 50.884 107.143 104.997 1.00 34.71 N
ATOM 17 C5 G A2018 52.105 106.706 105.498 1.00 36.81 C
ATOM 18 C6 G A2018 52.783 105.461 105.339 1.00 37.21 C
ATOM 19 O6 G A2018 52.437 104.465 104.684 1.00 39.03 O
ATOM 20 N1 G A2018 53.977 105.440 106.053 1.00 34.89 N
ATOM 21 C2 G A2018 54.456 106.465 106.819 1.00 33.54 C
ATOM 22 N2 G A2018 55.602 106.235 107.445 1.00 33.32 N
ATOM 23 N3 G A2018 53.854 107.623 106.967 1.00 34.49 N
ATOM 24 C4 G A2018 52.688 107.678 106.287 1.00 36.99 C
ATOM 25 P G A2019 52.953 114.300 108.236 1.00 39.00 P
ATOM 26 OP1 G A2019 53.728 114.730 107.055 1.00 37.70 O
ATOM 27 OP2 G A2019 53.511 114.489 109.590 1.00 39.79 O
ATOM 28 O5' G A2019 51.548 115.040 108.220 1.00 38.38 O
TER
ATOM 1 O3' G B2016 44.059 108.539 104.279 1.00 27.36 O
ATOM 2 P C B2017 45.300 107.543 104.117 1.00 28.39 P
ATOM 3 OP1 C B2017 44.944 106.467 103.192 1.00 27.89 O
ATOM 4 OP2 C B2017 45.818 107.221 105.456 1.00 28.40 O
ATOM 5 O5' C B2017 46.378 108.419 103.383 1.00 26.97 O
ATOM 6 C5' C B2017 47.730 108.061 103.451 1.00 30.92 C
ATOM 7 C4' C B2017 48.522 108.965 102.564 1.00 35.33 C
ATOM 8 O4' C B2017 48.314 108.628 101.187 1.00 36.21 O
ATOM 9 C3' C B2017 48.201 110.450 102.611 1.00 36.33 C
ATOM 10 O3' C B2017 48.901 111.066 103.682 1.00 38.89 O
ATOM 11 C2' C B2017 48.759 110.965 101.286 1.00 36.72 C
ATOM 12 O2' C B2017 50.104 111.343 101.434 1.00 38.48 O
ATOM 13 C1' C B2017 48.749 109.709 100.416 1.00 36.75 C
ATOM 14 N1 C B2017 48.004 109.751 99.160 1.00 36.41 N
ATOM 15 C2 C B2017 48.720 109.584 97.986 1.00 37.71 C
ATOM 16 O2 C B2017 49.941 109.407 98.056 1.00 40.12 O
ATOM 17 N3 C B2017 48.077 109.622 96.805 1.00 37.25 N
ATOM 18 C4 C B2017 46.762 109.821 96.774 1.00 36.46 C
ATOM 19 N4 C B2017 46.171 109.854 95.585 1.00 34.33 N
ATOM 20 C5 C B2017 45.998 109.996 97.966 1.00 35.69 C
ATOM 21 C6 C B2017 46.656 109.951 99.127 1.00 35.05 C
ATOM 22 P G B2018 48.091 111.741 104.902 1.00 43.34 P
ATOM 23 OP1 G B2018 47.315 110.670 105.573 1.00 41.56 O
ATOM 24 OP2 G B2018 47.410 112.995 104.465 1.00 41.08 O
ATOM 25 O5' G B2018 49.248 112.215 105.877 1.00 40.70 O
TER
Atoms:
OP1: (47.315,110.670,105.573)
OP2: (47.410,112.995,104.465)
C3': (51.660,112.339,107.078)
C1': (51.945,109.995,106.997)
C5': (49.172,112.016,107.290)
O6: (52.437,104.465,104.684)
O4': (50.744,110.229,107.695)
C8: (50.754,108.352,105.473)
C2: (54.456,106.465,106.819)
C6: (52.783,105.461,105.339)
C5: (52.105,106.706,105.498)
C4: (52.688,107.678,106.287)
P: (48.091,111.741,104.902)
C4': (50.524,111.651,107.817)
C2': (52.194,111.241,106.157)
O2': (53.563,111.395,105.877)
N1: (53.977,105.440,106.053)
N2: (55.602,106.235,107.445)
N3: (53.854,107.623,106.967)
N7: (50.884,107.143,104.997)
N9: (51.805,108.736,106.273)
O5': (49.248,112.215,105.877)
O3': (52.624,112.741,108.030)
OP2: (47.410,112.995,104.465)
C3': (51.660,112.339,107.078)
C1': (51.945,109.995,106.997)
C5': (49.172,112.016,107.290)
O6: (52.437,104.465,104.684)
O4': (50.744,110.229,107.695)
C8: (50.754,108.352,105.473)
C2: (54.456,106.465,106.819)
C6: (52.783,105.461,105.339)
C5: (52.105,106.706,105.498)
C4: (52.688,107.678,106.287)
P: (48.091,111.741,104.902)
C4': (50.524,111.651,107.817)
C2': (52.194,111.241,106.157)
O2': (53.563,111.395,105.877)
N1: (53.977,105.440,106.053)
N2: (55.602,106.235,107.445)
N3: (53.854,107.623,106.967)
N7: (50.884,107.143,104.997)
N9: (51.805,108.736,106.273)
O5': (49.248,112.215,105.877)
O3': (52.624,112.741,108.030)
C2: (48.720,109.584,97.986)
OP1: (44.944,106.467,103.192)
OP2: (45.818,107.221,105.456)
C4: (46.762,109.821,96.774)
O5': (46.378,108.419,103.383)
C3': (48.201,110.450,102.611)
C1': (48.749,109.709,100.416)
O4': (48.314,108.628,101.187)
C5': (47.730,108.061,103.451)
P: (45.300,107.543,104.117)
O2: (49.941,109.407,98.056)
C4': (48.522,108.965,102.564)
C2': (48.759,110.965,101.286)
O2': (50.104,111.343,101.434)
N1: (48.004,109.751,99.160)
N3: (48.077,109.622,96.805)
N4: (46.171,109.854,95.585)
C6: (46.656,109.951,99.127)
C5: (45.998,109.996,97.966)
O3': (48.901,111.066,103.682)
OP1: (44.944,106.467,103.192)
OP2: (45.818,107.221,105.456)
C4: (46.762,109.821,96.774)
O5': (46.378,108.419,103.383)
C3': (48.201,110.450,102.611)
C1': (48.749,109.709,100.416)
O4': (48.314,108.628,101.187)
C5': (47.730,108.061,103.451)
P: (45.300,107.543,104.117)
O2: (49.941,109.407,98.056)
C4': (48.522,108.965,102.564)
C2': (48.759,110.965,101.286)
O2': (50.104,111.343,101.434)
N1: (48.004,109.751,99.160)
N3: (48.077,109.622,96.805)
N4: (46.171,109.854,95.585)
C6: (46.656,109.951,99.127)
C5: (45.998,109.996,97.966)
O3': (48.901,111.066,103.682)
Image (generated by PyMOL):