Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIZ:A94:A41
Extra
PDB:
ATOM 1 O3' U A 93 -3.490 48.719 12.157 1.00 45.02 O
ATOM 2 P C A 94 -4.364 49.241 13.380 1.00 44.80 P
ATOM 3 OP1 C A 94 -4.321 50.718 13.372 1.00 44.48 O
ATOM 4 OP2 C A 94 -3.962 48.498 14.600 1.00 44.74 O
ATOM 5 O5' C A 94 -5.829 48.772 12.946 1.00 44.49 O
ATOM 6 C5' C A 94 -6.849 48.706 13.931 1.00 44.57 C
ATOM 7 C4' C A 94 -8.202 48.407 13.316 1.00 44.71 C
ATOM 8 O4' C A 94 -8.559 49.427 12.349 1.00 44.84 O
ATOM 9 C3' C A 94 -8.293 47.124 12.505 1.00 44.51 C
ATOM 10 O3' C A 94 -8.420 45.995 13.332 1.00 43.98 O
ATOM 11 C2' C A 94 -9.569 47.382 11.727 1.00 44.70 C
ATOM 12 O2' C A 94 -10.718 47.226 12.533 1.00 45.28 O
ATOM 13 C1' C A 94 -9.354 48.839 11.333 1.00 44.76 C
ATOM 14 N1 C A 94 -8.682 48.974 9.995 1.00 44.85 N
ATOM 15 C2 C A 94 -9.460 48.868 8.827 1.00 45.17 C
ATOM 16 O2 C A 94 -10.682 48.670 8.913 1.00 45.51 O
ATOM 17 N3 C A 94 -8.849 48.987 7.616 1.00 45.29 N
ATOM 18 C4 C A 94 -7.529 49.201 7.543 1.00 45.23 C
ATOM 19 N4 C A 94 -6.984 49.313 6.325 1.00 44.79 N
ATOM 20 C5 C A 94 -6.717 49.308 8.720 1.00 45.05 C
ATOM 21 C6 C A 94 -7.328 49.189 9.908 1.00 44.64 C
ATOM 22 P C A 95 -7.883 44.590 12.799 1.00 43.53 P
ATOM 23 OP1 C A 95 -7.914 43.658 13.951 1.00 43.46 O
ATOM 24 OP2 C A 95 -6.615 44.811 12.066 1.00 43.01 O
ATOM 25 O5' C A 95 -9.000 44.178 11.727 1.00 43.58 O
TER
ATOM 1 O3' C B 40 -3.712 55.348 1.743 1.00 47.10 O
ATOM 2 P A B 41 -3.796 53.940 2.484 1.00 47.05 P
ATOM 3 OP1 A B 41 -2.516 53.221 2.280 1.00 47.33 O
ATOM 4 OP2 A B 41 -5.080 53.305 2.104 1.00 46.73 O
ATOM 5 O5' A B 41 -3.902 54.389 4.015 1.00 46.36 O
ATOM 6 C5' A B 41 -2.729 54.608 4.784 1.00 44.82 C
ATOM 7 C4' A B 41 -2.789 53.759 6.038 1.00 43.73 C
ATOM 8 O4' A B 41 -4.063 53.953 6.704 1.00 43.13 O
ATOM 9 C3' A B 41 -2.652 52.255 5.807 1.00 43.32 C
ATOM 10 O3' A B 41 -1.564 51.743 6.577 1.00 43.45 O
ATOM 11 C2' A B 41 -3.978 51.676 6.292 1.00 43.01 C
ATOM 12 O2' A B 41 -3.813 50.431 6.945 1.00 43.33 O
ATOM 13 C1' A B 41 -4.433 52.730 7.296 1.00 42.07 C
ATOM 14 N9 A B 41 -5.871 52.718 7.586 1.00 41.09 N
ATOM 15 C8 A B 41 -6.902 52.757 6.682 1.00 40.88 C
ATOM 16 N7 A B 41 -8.094 52.732 7.232 1.00 40.47 N
ATOM 17 C5 A B 41 -7.826 52.668 8.590 1.00 39.85 C
ATOM 18 C6 A B 41 -8.665 52.615 9.719 1.00 39.48 C
ATOM 19 N6 A B 41 -9.997 52.617 9.625 1.00 40.34 N
ATOM 20 N1 A B 41 -8.087 52.563 10.940 1.00 38.80 N
ATOM 21 C2 A B 41 -6.752 52.567 11.019 1.00 38.56 C
ATOM 22 N3 A B 41 -5.860 52.612 10.029 1.00 38.87 N
ATOM 23 C4 A B 41 -6.463 52.662 8.829 1.00 39.85 C
ATOM 24 P G B 42 -0.056 51.937 6.082 1.00 43.32 P
ATOM 25 OP1 G B 42 0.421 53.265 6.523 1.00 44.19 O
ATOM 26 OP2 G B 42 -0.001 51.579 4.647 1.00 43.70 O
ATOM 27 O5' G B 42 0.713 50.838 6.932 1.00 43.00 O
TER
ATOM 2 P C A 94 -4.364 49.241 13.380 1.00 44.80 P
ATOM 3 OP1 C A 94 -4.321 50.718 13.372 1.00 44.48 O
ATOM 4 OP2 C A 94 -3.962 48.498 14.600 1.00 44.74 O
ATOM 5 O5' C A 94 -5.829 48.772 12.946 1.00 44.49 O
ATOM 6 C5' C A 94 -6.849 48.706 13.931 1.00 44.57 C
ATOM 7 C4' C A 94 -8.202 48.407 13.316 1.00 44.71 C
ATOM 8 O4' C A 94 -8.559 49.427 12.349 1.00 44.84 O
ATOM 9 C3' C A 94 -8.293 47.124 12.505 1.00 44.51 C
ATOM 10 O3' C A 94 -8.420 45.995 13.332 1.00 43.98 O
ATOM 11 C2' C A 94 -9.569 47.382 11.727 1.00 44.70 C
ATOM 12 O2' C A 94 -10.718 47.226 12.533 1.00 45.28 O
ATOM 13 C1' C A 94 -9.354 48.839 11.333 1.00 44.76 C
ATOM 14 N1 C A 94 -8.682 48.974 9.995 1.00 44.85 N
ATOM 15 C2 C A 94 -9.460 48.868 8.827 1.00 45.17 C
ATOM 16 O2 C A 94 -10.682 48.670 8.913 1.00 45.51 O
ATOM 17 N3 C A 94 -8.849 48.987 7.616 1.00 45.29 N
ATOM 18 C4 C A 94 -7.529 49.201 7.543 1.00 45.23 C
ATOM 19 N4 C A 94 -6.984 49.313 6.325 1.00 44.79 N
ATOM 20 C5 C A 94 -6.717 49.308 8.720 1.00 45.05 C
ATOM 21 C6 C A 94 -7.328 49.189 9.908 1.00 44.64 C
ATOM 22 P C A 95 -7.883 44.590 12.799 1.00 43.53 P
ATOM 23 OP1 C A 95 -7.914 43.658 13.951 1.00 43.46 O
ATOM 24 OP2 C A 95 -6.615 44.811 12.066 1.00 43.01 O
ATOM 25 O5' C A 95 -9.000 44.178 11.727 1.00 43.58 O
TER
ATOM 1 O3' C B 40 -3.712 55.348 1.743 1.00 47.10 O
ATOM 2 P A B 41 -3.796 53.940 2.484 1.00 47.05 P
ATOM 3 OP1 A B 41 -2.516 53.221 2.280 1.00 47.33 O
ATOM 4 OP2 A B 41 -5.080 53.305 2.104 1.00 46.73 O
ATOM 5 O5' A B 41 -3.902 54.389 4.015 1.00 46.36 O
ATOM 6 C5' A B 41 -2.729 54.608 4.784 1.00 44.82 C
ATOM 7 C4' A B 41 -2.789 53.759 6.038 1.00 43.73 C
ATOM 8 O4' A B 41 -4.063 53.953 6.704 1.00 43.13 O
ATOM 9 C3' A B 41 -2.652 52.255 5.807 1.00 43.32 C
ATOM 10 O3' A B 41 -1.564 51.743 6.577 1.00 43.45 O
ATOM 11 C2' A B 41 -3.978 51.676 6.292 1.00 43.01 C
ATOM 12 O2' A B 41 -3.813 50.431 6.945 1.00 43.33 O
ATOM 13 C1' A B 41 -4.433 52.730 7.296 1.00 42.07 C
ATOM 14 N9 A B 41 -5.871 52.718 7.586 1.00 41.09 N
ATOM 15 C8 A B 41 -6.902 52.757 6.682 1.00 40.88 C
ATOM 16 N7 A B 41 -8.094 52.732 7.232 1.00 40.47 N
ATOM 17 C5 A B 41 -7.826 52.668 8.590 1.00 39.85 C
ATOM 18 C6 A B 41 -8.665 52.615 9.719 1.00 39.48 C
ATOM 19 N6 A B 41 -9.997 52.617 9.625 1.00 40.34 N
ATOM 20 N1 A B 41 -8.087 52.563 10.940 1.00 38.80 N
ATOM 21 C2 A B 41 -6.752 52.567 11.019 1.00 38.56 C
ATOM 22 N3 A B 41 -5.860 52.612 10.029 1.00 38.87 N
ATOM 23 C4 A B 41 -6.463 52.662 8.829 1.00 39.85 C
ATOM 24 P G B 42 -0.056 51.937 6.082 1.00 43.32 P
ATOM 25 OP1 G B 42 0.421 53.265 6.523 1.00 44.19 O
ATOM 26 OP2 G B 42 -0.001 51.579 4.647 1.00 43.70 O
ATOM 27 O5' G B 42 0.713 50.838 6.932 1.00 43.00 O
TER
Atoms:
C2: (-9.460,48.868,8.827)
OP1: (-4.321,50.718,13.372)
OP2: (-3.962,48.498,14.600)
C4: (-7.529,49.201,7.543)
O5': (-5.829,48.772,12.946)
C3': (-8.293,47.124,12.505)
C1': (-9.354,48.839,11.333)
O4': (-8.559,49.427,12.349)
C5': (-6.849,48.706,13.931)
P: (-4.364,49.241,13.380)
O2: (-10.682,48.670,8.913)
C4': (-8.202,48.407,13.316)
C2': (-9.569,47.382,11.727)
O2': (-10.718,47.226,12.533)
N1: (-8.682,48.974,9.995)
N3: (-8.849,48.987,7.616)
N4: (-6.984,49.313,6.325)
C6: (-7.328,49.189,9.908)
C5: (-6.717,49.308,8.720)
O3': (-8.420,45.995,13.332)
OP1: (-4.321,50.718,13.372)
OP2: (-3.962,48.498,14.600)
C4: (-7.529,49.201,7.543)
O5': (-5.829,48.772,12.946)
C3': (-8.293,47.124,12.505)
C1': (-9.354,48.839,11.333)
O4': (-8.559,49.427,12.349)
C5': (-6.849,48.706,13.931)
P: (-4.364,49.241,13.380)
O2: (-10.682,48.670,8.913)
C4': (-8.202,48.407,13.316)
C2': (-9.569,47.382,11.727)
O2': (-10.718,47.226,12.533)
N1: (-8.682,48.974,9.995)
N3: (-8.849,48.987,7.616)
N4: (-6.984,49.313,6.325)
C6: (-7.328,49.189,9.908)
C5: (-6.717,49.308,8.720)
O3': (-8.420,45.995,13.332)
OP1: (-2.516,53.221,2.280)
OP2: (-5.080,53.305,2.104)
C3': (-2.652,52.255,5.807)
C1': (-4.433,52.730,7.296)
C5': (-2.729,54.608,4.784)
O4': (-4.063,53.953,6.704)
C8: (-6.902,52.757,6.682)
O2': (-3.813,50.431,6.945)
C6: (-8.665,52.615,9.719)
C5: (-7.826,52.668,8.590)
C4: (-6.463,52.662,8.829)
P: (-3.796,53.940,2.484)
C4': (-2.789,53.759,6.038)
C2': (-3.978,51.676,6.292)
C2: (-6.752,52.567,11.019)
N1: (-8.087,52.563,10.940)
N3: (-5.860,52.612,10.029)
N6: (-9.997,52.617,9.625)
N7: (-8.094,52.732,7.232)
N9: (-5.871,52.718,7.586)
O5': (-3.902,54.389,4.015)
O3': (-1.564,51.743,6.577)
OP2: (-5.080,53.305,2.104)
C3': (-2.652,52.255,5.807)
C1': (-4.433,52.730,7.296)
C5': (-2.729,54.608,4.784)
O4': (-4.063,53.953,6.704)
C8: (-6.902,52.757,6.682)
O2': (-3.813,50.431,6.945)
C6: (-8.665,52.615,9.719)
C5: (-7.826,52.668,8.590)
C4: (-6.463,52.662,8.829)
P: (-3.796,53.940,2.484)
C4': (-2.789,53.759,6.038)
C2': (-3.978,51.676,6.292)
C2: (-6.752,52.567,11.019)
N1: (-8.087,52.563,10.940)
N3: (-5.860,52.612,10.029)
N6: (-9.997,52.617,9.625)
N7: (-8.094,52.732,7.232)
N9: (-5.871,52.718,7.586)
O5': (-3.902,54.389,4.015)
O3': (-1.564,51.743,6.577)
Image (generated by PyMOL):