Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ2:A94:A41
Extra
PDB:
ATOM 1 O3' U A 93 -3.594 48.571 11.891 1.00 25.24 O
ATOM 2 P C A 94 -4.311 49.198 13.176 1.00 25.89 P
ATOM 3 OP1 C A 94 -4.078 50.660 13.132 1.00 25.60 O
ATOM 4 OP2 C A 94 -3.936 48.415 14.380 1.00 25.72 O
ATOM 5 O5' C A 94 -5.850 48.931 12.838 1.00 26.64 O
ATOM 6 C5' C A 94 -6.816 48.735 13.866 1.00 27.71 C
ATOM 7 C4' C A 94 -8.178 48.486 13.246 1.00 28.38 C
ATOM 8 O4' C A 94 -8.431 49.485 12.224 1.00 28.97 O
ATOM 9 C3' C A 94 -8.315 47.179 12.483 1.00 28.46 C
ATOM 10 O3' C A 94 -8.564 46.087 13.349 1.00 28.54 O
ATOM 11 C2' C A 94 -9.507 47.480 11.589 1.00 28.72 C
ATOM 12 O2' C A 94 -10.733 47.415 12.289 1.00 29.18 O
ATOM 13 C1' C A 94 -9.206 48.917 11.181 1.00 28.82 C
ATOM 14 N1 C A 94 -8.493 49.055 9.857 1.00 28.79 N
ATOM 15 C2 C A 94 -9.240 49.064 8.664 1.00 28.83 C
ATOM 16 O2 C A 94 -10.473 48.949 8.710 1.00 28.80 O
ATOM 17 N3 C A 94 -8.585 49.201 7.476 1.00 28.88 N
ATOM 18 C4 C A 94 -7.251 49.324 7.446 1.00 28.76 C
ATOM 19 N4 C A 94 -6.658 49.456 6.255 1.00 28.41 N
ATOM 20 C5 C A 94 -6.472 49.316 8.645 1.00 28.74 C
ATOM 21 C6 C A 94 -7.127 49.185 9.810 1.00 28.68 C
ATOM 22 P C A 95 -8.076 44.632 12.898 1.00 28.71 P
ATOM 23 OP1 C A 95 -8.279 43.719 14.046 1.00 29.04 O
ATOM 24 OP2 C A 95 -6.735 44.757 12.282 1.00 28.32 O
ATOM 25 O5' C A 95 -9.103 44.265 11.725 1.00 29.86 O
TER
ATOM 1 O3' C B 40 -3.589 55.543 1.780 1.00 31.07 O
ATOM 2 P A B 41 -3.577 54.112 2.483 1.00 29.89 P
ATOM 3 OP1 A B 41 -2.256 53.496 2.220 1.00 30.27 O
ATOM 4 OP2 A B 41 -4.816 53.387 2.112 1.00 29.73 O
ATOM 5 O5' A B 41 -3.705 54.529 4.024 1.00 28.32 O
ATOM 6 C5' A B 41 -2.559 54.816 4.812 1.00 25.63 C
ATOM 7 C4' A B 41 -2.576 53.925 6.037 1.00 24.03 C
ATOM 8 O4' A B 41 -3.852 54.054 6.719 1.00 23.21 O
ATOM 9 C3' A B 41 -2.410 52.435 5.743 1.00 23.32 C
ATOM 10 O3' A B 41 -1.403 51.883 6.588 1.00 23.66 O
ATOM 11 C2' A B 41 -3.795 51.861 6.036 1.00 22.61 C
ATOM 12 O2' A B 41 -3.766 50.522 6.472 1.00 22.56 O
ATOM 13 C1' A B 41 -4.246 52.775 7.166 1.00 21.77 C
ATOM 14 N9 A B 41 -5.685 52.763 7.436 1.00 21.32 N
ATOM 15 C8 A B 41 -6.702 52.784 6.518 1.00 21.08 C
ATOM 16 N7 A B 41 -7.901 52.765 7.049 1.00 20.82 N
ATOM 17 C5 A B 41 -7.657 52.731 8.412 1.00 20.75 C
ATOM 18 C6 A B 41 -8.516 52.699 9.532 1.00 20.89 C
ATOM 19 N6 A B 41 -9.847 52.699 9.425 1.00 21.11 N
ATOM 20 N1 A B 41 -7.960 52.672 10.765 1.00 20.57 N
ATOM 21 C2 A B 41 -6.626 52.678 10.862 1.00 20.25 C
ATOM 22 N3 A B 41 -5.718 52.706 9.883 1.00 20.52 N
ATOM 23 C4 A B 41 -6.299 52.732 8.670 1.00 20.67 C
ATOM 24 P G B 42 0.143 52.056 6.213 1.00 23.58 P
ATOM 25 OP1 G B 42 0.598 53.368 6.730 1.00 24.46 O
ATOM 26 OP2 G B 42 0.298 51.729 4.778 1.00 23.41 O
ATOM 27 O5' G B 42 0.854 50.900 7.053 1.00 24.04 O
TER
ATOM 2 P C A 94 -4.311 49.198 13.176 1.00 25.89 P
ATOM 3 OP1 C A 94 -4.078 50.660 13.132 1.00 25.60 O
ATOM 4 OP2 C A 94 -3.936 48.415 14.380 1.00 25.72 O
ATOM 5 O5' C A 94 -5.850 48.931 12.838 1.00 26.64 O
ATOM 6 C5' C A 94 -6.816 48.735 13.866 1.00 27.71 C
ATOM 7 C4' C A 94 -8.178 48.486 13.246 1.00 28.38 C
ATOM 8 O4' C A 94 -8.431 49.485 12.224 1.00 28.97 O
ATOM 9 C3' C A 94 -8.315 47.179 12.483 1.00 28.46 C
ATOM 10 O3' C A 94 -8.564 46.087 13.349 1.00 28.54 O
ATOM 11 C2' C A 94 -9.507 47.480 11.589 1.00 28.72 C
ATOM 12 O2' C A 94 -10.733 47.415 12.289 1.00 29.18 O
ATOM 13 C1' C A 94 -9.206 48.917 11.181 1.00 28.82 C
ATOM 14 N1 C A 94 -8.493 49.055 9.857 1.00 28.79 N
ATOM 15 C2 C A 94 -9.240 49.064 8.664 1.00 28.83 C
ATOM 16 O2 C A 94 -10.473 48.949 8.710 1.00 28.80 O
ATOM 17 N3 C A 94 -8.585 49.201 7.476 1.00 28.88 N
ATOM 18 C4 C A 94 -7.251 49.324 7.446 1.00 28.76 C
ATOM 19 N4 C A 94 -6.658 49.456 6.255 1.00 28.41 N
ATOM 20 C5 C A 94 -6.472 49.316 8.645 1.00 28.74 C
ATOM 21 C6 C A 94 -7.127 49.185 9.810 1.00 28.68 C
ATOM 22 P C A 95 -8.076 44.632 12.898 1.00 28.71 P
ATOM 23 OP1 C A 95 -8.279 43.719 14.046 1.00 29.04 O
ATOM 24 OP2 C A 95 -6.735 44.757 12.282 1.00 28.32 O
ATOM 25 O5' C A 95 -9.103 44.265 11.725 1.00 29.86 O
TER
ATOM 1 O3' C B 40 -3.589 55.543 1.780 1.00 31.07 O
ATOM 2 P A B 41 -3.577 54.112 2.483 1.00 29.89 P
ATOM 3 OP1 A B 41 -2.256 53.496 2.220 1.00 30.27 O
ATOM 4 OP2 A B 41 -4.816 53.387 2.112 1.00 29.73 O
ATOM 5 O5' A B 41 -3.705 54.529 4.024 1.00 28.32 O
ATOM 6 C5' A B 41 -2.559 54.816 4.812 1.00 25.63 C
ATOM 7 C4' A B 41 -2.576 53.925 6.037 1.00 24.03 C
ATOM 8 O4' A B 41 -3.852 54.054 6.719 1.00 23.21 O
ATOM 9 C3' A B 41 -2.410 52.435 5.743 1.00 23.32 C
ATOM 10 O3' A B 41 -1.403 51.883 6.588 1.00 23.66 O
ATOM 11 C2' A B 41 -3.795 51.861 6.036 1.00 22.61 C
ATOM 12 O2' A B 41 -3.766 50.522 6.472 1.00 22.56 O
ATOM 13 C1' A B 41 -4.246 52.775 7.166 1.00 21.77 C
ATOM 14 N9 A B 41 -5.685 52.763 7.436 1.00 21.32 N
ATOM 15 C8 A B 41 -6.702 52.784 6.518 1.00 21.08 C
ATOM 16 N7 A B 41 -7.901 52.765 7.049 1.00 20.82 N
ATOM 17 C5 A B 41 -7.657 52.731 8.412 1.00 20.75 C
ATOM 18 C6 A B 41 -8.516 52.699 9.532 1.00 20.89 C
ATOM 19 N6 A B 41 -9.847 52.699 9.425 1.00 21.11 N
ATOM 20 N1 A B 41 -7.960 52.672 10.765 1.00 20.57 N
ATOM 21 C2 A B 41 -6.626 52.678 10.862 1.00 20.25 C
ATOM 22 N3 A B 41 -5.718 52.706 9.883 1.00 20.52 N
ATOM 23 C4 A B 41 -6.299 52.732 8.670 1.00 20.67 C
ATOM 24 P G B 42 0.143 52.056 6.213 1.00 23.58 P
ATOM 25 OP1 G B 42 0.598 53.368 6.730 1.00 24.46 O
ATOM 26 OP2 G B 42 0.298 51.729 4.778 1.00 23.41 O
ATOM 27 O5' G B 42 0.854 50.900 7.053 1.00 24.04 O
TER
Atoms:
C2: (-9.240,49.064,8.664)
OP1: (-4.078,50.660,13.132)
OP2: (-3.936,48.415,14.380)
C4: (-7.251,49.324,7.446)
O5': (-5.850,48.931,12.838)
C3': (-8.315,47.179,12.483)
C1': (-9.206,48.917,11.181)
O4': (-8.431,49.485,12.224)
C5': (-6.816,48.735,13.866)
P: (-4.311,49.198,13.176)
O2: (-10.473,48.949,8.710)
C4': (-8.178,48.486,13.246)
C2': (-9.507,47.480,11.589)
O2': (-10.733,47.415,12.289)
N1: (-8.493,49.055,9.857)
N3: (-8.585,49.201,7.476)
N4: (-6.658,49.456,6.255)
C6: (-7.127,49.185,9.810)
C5: (-6.472,49.316,8.645)
O3': (-8.564,46.087,13.349)
OP1: (-4.078,50.660,13.132)
OP2: (-3.936,48.415,14.380)
C4: (-7.251,49.324,7.446)
O5': (-5.850,48.931,12.838)
C3': (-8.315,47.179,12.483)
C1': (-9.206,48.917,11.181)
O4': (-8.431,49.485,12.224)
C5': (-6.816,48.735,13.866)
P: (-4.311,49.198,13.176)
O2: (-10.473,48.949,8.710)
C4': (-8.178,48.486,13.246)
C2': (-9.507,47.480,11.589)
O2': (-10.733,47.415,12.289)
N1: (-8.493,49.055,9.857)
N3: (-8.585,49.201,7.476)
N4: (-6.658,49.456,6.255)
C6: (-7.127,49.185,9.810)
C5: (-6.472,49.316,8.645)
O3': (-8.564,46.087,13.349)
OP1: (-2.256,53.496,2.220)
OP2: (-4.816,53.387,2.112)
C3': (-2.410,52.435,5.743)
C1': (-4.246,52.775,7.166)
C5': (-2.559,54.816,4.812)
O4': (-3.852,54.054,6.719)
C8: (-6.702,52.784,6.518)
O2': (-3.766,50.522,6.472)
C6: (-8.516,52.699,9.532)
C5: (-7.657,52.731,8.412)
C4: (-6.299,52.732,8.670)
P: (-3.577,54.112,2.483)
C4': (-2.576,53.925,6.037)
C2': (-3.795,51.861,6.036)
C2: (-6.626,52.678,10.862)
N1: (-7.960,52.672,10.765)
N3: (-5.718,52.706,9.883)
N6: (-9.847,52.699,9.425)
N7: (-7.901,52.765,7.049)
N9: (-5.685,52.763,7.436)
O5': (-3.705,54.529,4.024)
O3': (-1.403,51.883,6.588)
OP2: (-4.816,53.387,2.112)
C3': (-2.410,52.435,5.743)
C1': (-4.246,52.775,7.166)
C5': (-2.559,54.816,4.812)
O4': (-3.852,54.054,6.719)
C8: (-6.702,52.784,6.518)
O2': (-3.766,50.522,6.472)
C6: (-8.516,52.699,9.532)
C5: (-7.657,52.731,8.412)
C4: (-6.299,52.732,8.670)
P: (-3.577,54.112,2.483)
C4': (-2.576,53.925,6.037)
C2': (-3.795,51.861,6.036)
C2: (-6.626,52.678,10.862)
N1: (-7.960,52.672,10.765)
N3: (-5.718,52.706,9.883)
N6: (-9.847,52.699,9.425)
N7: (-7.901,52.765,7.049)
N9: (-5.685,52.763,7.436)
O5': (-3.705,54.529,4.024)
O3': (-1.403,51.883,6.588)
Image (generated by PyMOL):