Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A28:A475
Extra
PDB:
ATOM 1 O3' U A 27 -52.688 -92.503 49.059 1.00 65.42 O
ATOM 2 P C A 28 -51.597 -92.814 50.164 1.00127.15 P
ATOM 3 OP1 C A 28 -50.863 -94.018 49.720 1.00110.73 O
ATOM 4 OP2 C A 28 -52.253 -92.722 51.490 1.00104.99 O
ATOM 5 O5' C A 28 -50.614 -91.574 50.040 1.00121.22 O
ATOM 6 C5' C A 28 -50.829 -90.462 50.871 1.00 97.50 C
ATOM 7 C4' C A 28 -49.620 -89.578 50.729 1.00 96.61 C
ATOM 8 O4' C A 28 -48.942 -89.893 49.499 1.00114.47 O
ATOM 9 C3' C A 28 -49.997 -88.127 50.617 1.00 93.79 C
ATOM 10 O3' C A 28 -49.743 -87.568 51.851 1.00 91.71 O
ATOM 11 C2' C A 28 -49.074 -87.534 49.557 1.00107.37 C
ATOM 12 O2' C A 28 -48.202 -86.545 50.078 1.00 84.51 O
ATOM 13 C1' C A 28 -48.299 -88.731 49.026 1.00123.87 C
ATOM 14 N1 C A 28 -48.303 -88.745 47.543 1.00135.88 N
ATOM 15 C2 C A 28 -47.246 -89.359 46.854 1.00137.55 C
ATOM 16 O2 C A 28 -46.323 -89.897 47.496 1.00130.47 O
ATOM 17 N3 C A 28 -47.278 -89.347 45.495 1.00132.46 N
ATOM 18 C4 C A 28 -48.293 -88.759 44.850 1.00127.52 C
ATOM 19 N4 C A 28 -48.277 -88.775 43.514 1.00119.84 N
ATOM 20 C5 C A 28 -49.371 -88.127 45.539 1.00112.94 C
ATOM 21 C6 C A 28 -49.333 -88.142 46.873 1.00109.43 C
ATOM 22 P G A 29 -50.377 -86.145 52.122 1.00 77.46 P
ATOM 23 OP1 G A 29 -49.257 -85.175 52.235 1.00 82.57 O
ATOM 24 OP2 G A 29 -51.332 -86.326 53.240 1.00 78.38 O
ATOM 25 O5' G A 29 -51.216 -85.816 50.788 1.00 68.80 O
TER
ATOM 1 O3' C B 474 -53.451 -80.677 41.594 1.00 45.63 O
ATOM 2 P A B 475 -53.873 -82.026 42.371 1.00 28.33 P
ATOM 3 OP1 A B 475 -54.579 -82.876 41.388 1.00 37.89 O
ATOM 4 OP2 A B 475 -54.471 -81.673 43.672 1.00 32.21 O
ATOM 5 O5' A B 475 -52.496 -82.738 42.722 1.00 43.48 O
ATOM 6 C5' A B 475 -51.837 -82.317 43.890 1.00 42.22 C
ATOM 7 C4' A B 475 -51.306 -83.524 44.616 1.00 39.93 C
ATOM 8 O4' A B 475 -52.432 -84.290 45.102 1.00 44.70 O
ATOM 9 C3' A B 475 -50.505 -84.464 43.729 1.00 43.15 C
ATOM 10 O3' A B 475 -49.511 -85.114 44.514 1.00 56.04 O
ATOM 11 C2' A B 475 -51.552 -85.478 43.295 1.00 45.01 C
ATOM 12 O2' A B 475 -50.991 -86.744 43.000 1.00 47.43 O
ATOM 13 C1' A B 475 -52.349 -85.598 44.580 1.00 43.38 C
ATOM 14 N9 A B 475 -53.691 -86.108 44.363 1.00 41.32 N
ATOM 15 C8 A B 475 -54.567 -85.752 43.381 1.00 44.43 C
ATOM 16 N7 A B 475 -55.705 -86.394 43.458 1.00 45.45 N
ATOM 17 C5 A B 475 -55.564 -87.219 44.566 1.00 48.30 C
ATOM 18 C6 A B 475 -56.414 -88.157 45.194 1.00 50.84 C
ATOM 19 N6 A B 475 -57.650 -88.446 44.780 1.00 49.68 N
ATOM 20 N1 A B 475 -55.946 -88.802 46.278 1.00 54.82 N
ATOM 21 C2 A B 475 -54.712 -88.530 46.704 1.00 54.34 C
ATOM 22 N3 A B 475 -53.827 -87.673 46.203 1.00 50.88 N
ATOM 23 C4 A B 475 -54.321 -87.050 45.130 1.00 43.36 C
ATOM 24 P C B 476 -48.133 -84.395 44.886 1.00 37.50 P
ATOM 25 OP1 C B 476 -47.399 -85.322 45.768 1.00 39.27 O
ATOM 26 OP2 C B 476 -48.420 -83.022 45.383 1.00 50.02 O
ATOM 27 O5' C B 476 -47.448 -84.272 43.441 1.00 34.89 O
TER
ATOM 2 P C A 28 -51.597 -92.814 50.164 1.00127.15 P
ATOM 3 OP1 C A 28 -50.863 -94.018 49.720 1.00110.73 O
ATOM 4 OP2 C A 28 -52.253 -92.722 51.490 1.00104.99 O
ATOM 5 O5' C A 28 -50.614 -91.574 50.040 1.00121.22 O
ATOM 6 C5' C A 28 -50.829 -90.462 50.871 1.00 97.50 C
ATOM 7 C4' C A 28 -49.620 -89.578 50.729 1.00 96.61 C
ATOM 8 O4' C A 28 -48.942 -89.893 49.499 1.00114.47 O
ATOM 9 C3' C A 28 -49.997 -88.127 50.617 1.00 93.79 C
ATOM 10 O3' C A 28 -49.743 -87.568 51.851 1.00 91.71 O
ATOM 11 C2' C A 28 -49.074 -87.534 49.557 1.00107.37 C
ATOM 12 O2' C A 28 -48.202 -86.545 50.078 1.00 84.51 O
ATOM 13 C1' C A 28 -48.299 -88.731 49.026 1.00123.87 C
ATOM 14 N1 C A 28 -48.303 -88.745 47.543 1.00135.88 N
ATOM 15 C2 C A 28 -47.246 -89.359 46.854 1.00137.55 C
ATOM 16 O2 C A 28 -46.323 -89.897 47.496 1.00130.47 O
ATOM 17 N3 C A 28 -47.278 -89.347 45.495 1.00132.46 N
ATOM 18 C4 C A 28 -48.293 -88.759 44.850 1.00127.52 C
ATOM 19 N4 C A 28 -48.277 -88.775 43.514 1.00119.84 N
ATOM 20 C5 C A 28 -49.371 -88.127 45.539 1.00112.94 C
ATOM 21 C6 C A 28 -49.333 -88.142 46.873 1.00109.43 C
ATOM 22 P G A 29 -50.377 -86.145 52.122 1.00 77.46 P
ATOM 23 OP1 G A 29 -49.257 -85.175 52.235 1.00 82.57 O
ATOM 24 OP2 G A 29 -51.332 -86.326 53.240 1.00 78.38 O
ATOM 25 O5' G A 29 -51.216 -85.816 50.788 1.00 68.80 O
TER
ATOM 1 O3' C B 474 -53.451 -80.677 41.594 1.00 45.63 O
ATOM 2 P A B 475 -53.873 -82.026 42.371 1.00 28.33 P
ATOM 3 OP1 A B 475 -54.579 -82.876 41.388 1.00 37.89 O
ATOM 4 OP2 A B 475 -54.471 -81.673 43.672 1.00 32.21 O
ATOM 5 O5' A B 475 -52.496 -82.738 42.722 1.00 43.48 O
ATOM 6 C5' A B 475 -51.837 -82.317 43.890 1.00 42.22 C
ATOM 7 C4' A B 475 -51.306 -83.524 44.616 1.00 39.93 C
ATOM 8 O4' A B 475 -52.432 -84.290 45.102 1.00 44.70 O
ATOM 9 C3' A B 475 -50.505 -84.464 43.729 1.00 43.15 C
ATOM 10 O3' A B 475 -49.511 -85.114 44.514 1.00 56.04 O
ATOM 11 C2' A B 475 -51.552 -85.478 43.295 1.00 45.01 C
ATOM 12 O2' A B 475 -50.991 -86.744 43.000 1.00 47.43 O
ATOM 13 C1' A B 475 -52.349 -85.598 44.580 1.00 43.38 C
ATOM 14 N9 A B 475 -53.691 -86.108 44.363 1.00 41.32 N
ATOM 15 C8 A B 475 -54.567 -85.752 43.381 1.00 44.43 C
ATOM 16 N7 A B 475 -55.705 -86.394 43.458 1.00 45.45 N
ATOM 17 C5 A B 475 -55.564 -87.219 44.566 1.00 48.30 C
ATOM 18 C6 A B 475 -56.414 -88.157 45.194 1.00 50.84 C
ATOM 19 N6 A B 475 -57.650 -88.446 44.780 1.00 49.68 N
ATOM 20 N1 A B 475 -55.946 -88.802 46.278 1.00 54.82 N
ATOM 21 C2 A B 475 -54.712 -88.530 46.704 1.00 54.34 C
ATOM 22 N3 A B 475 -53.827 -87.673 46.203 1.00 50.88 N
ATOM 23 C4 A B 475 -54.321 -87.050 45.130 1.00 43.36 C
ATOM 24 P C B 476 -48.133 -84.395 44.886 1.00 37.50 P
ATOM 25 OP1 C B 476 -47.399 -85.322 45.768 1.00 39.27 O
ATOM 26 OP2 C B 476 -48.420 -83.022 45.383 1.00 50.02 O
ATOM 27 O5' C B 476 -47.448 -84.272 43.441 1.00 34.89 O
TER
Atoms:
C2: (-47.246,-89.359,46.854)
OP1: (-50.863,-94.018,49.720)
OP2: (-52.253,-92.722,51.490)
C4: (-48.293,-88.759,44.850)
O5': (-50.614,-91.574,50.040)
C3': (-49.997,-88.127,50.617)
C1': (-48.299,-88.731,49.026)
O4': (-48.942,-89.893,49.499)
C5': (-50.829,-90.462,50.871)
P: (-51.597,-92.814,50.164)
O2: (-46.323,-89.897,47.496)
C4': (-49.620,-89.578,50.729)
C2': (-49.074,-87.534,49.557)
O2': (-48.202,-86.545,50.078)
N1: (-48.303,-88.745,47.543)
N3: (-47.278,-89.347,45.495)
N4: (-48.277,-88.775,43.514)
C6: (-49.333,-88.142,46.873)
C5: (-49.371,-88.127,45.539)
O3': (-49.743,-87.568,51.851)
OP1: (-50.863,-94.018,49.720)
OP2: (-52.253,-92.722,51.490)
C4: (-48.293,-88.759,44.850)
O5': (-50.614,-91.574,50.040)
C3': (-49.997,-88.127,50.617)
C1': (-48.299,-88.731,49.026)
O4': (-48.942,-89.893,49.499)
C5': (-50.829,-90.462,50.871)
P: (-51.597,-92.814,50.164)
O2: (-46.323,-89.897,47.496)
C4': (-49.620,-89.578,50.729)
C2': (-49.074,-87.534,49.557)
O2': (-48.202,-86.545,50.078)
N1: (-48.303,-88.745,47.543)
N3: (-47.278,-89.347,45.495)
N4: (-48.277,-88.775,43.514)
C6: (-49.333,-88.142,46.873)
C5: (-49.371,-88.127,45.539)
O3': (-49.743,-87.568,51.851)
OP1: (-54.579,-82.876,41.388)
OP2: (-54.471,-81.673,43.672)
C3': (-50.505,-84.464,43.729)
C1': (-52.349,-85.598,44.580)
C5': (-51.837,-82.317,43.890)
O4': (-52.432,-84.290,45.102)
C8: (-54.567,-85.752,43.381)
O2': (-50.991,-86.744,43.000)
C6: (-56.414,-88.157,45.194)
C5: (-55.564,-87.219,44.566)
C4: (-54.321,-87.050,45.130)
P: (-53.873,-82.026,42.371)
C4': (-51.306,-83.524,44.616)
C2': (-51.552,-85.478,43.295)
C2: (-54.712,-88.530,46.704)
N1: (-55.946,-88.802,46.278)
N3: (-53.827,-87.673,46.203)
N6: (-57.650,-88.446,44.780)
N7: (-55.705,-86.394,43.458)
N9: (-53.691,-86.108,44.363)
O5': (-52.496,-82.738,42.722)
O3': (-49.511,-85.114,44.514)
OP2: (-54.471,-81.673,43.672)
C3': (-50.505,-84.464,43.729)
C1': (-52.349,-85.598,44.580)
C5': (-51.837,-82.317,43.890)
O4': (-52.432,-84.290,45.102)
C8: (-54.567,-85.752,43.381)
O2': (-50.991,-86.744,43.000)
C6: (-56.414,-88.157,45.194)
C5: (-55.564,-87.219,44.566)
C4: (-54.321,-87.050,45.130)
P: (-53.873,-82.026,42.371)
C4': (-51.306,-83.524,44.616)
C2': (-51.552,-85.478,43.295)
C2: (-54.712,-88.530,46.704)
N1: (-55.946,-88.802,46.278)
N3: (-53.827,-87.673,46.203)
N6: (-57.650,-88.446,44.780)
N7: (-55.705,-86.394,43.458)
N9: (-53.691,-86.108,44.363)
O5': (-52.496,-82.738,42.722)
O3': (-49.511,-85.114,44.514)
Image (generated by PyMOL):