Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11909:11910
Extra
PDB:
ATOM 1 O3' C A1908 -1.308 58.429 108.226 1.00128.16 O
ATOM 2 P U A1909 -1.966 56.978 108.583 1.00129.06 P
ATOM 3 OP1 U A1909 -1.853 56.762 110.053 1.00129.34 O
ATOM 4 OP2 U A1909 -1.330 55.982 107.678 1.00128.26 O
ATOM 5 O5' U A1909 -3.491 57.174 108.173 1.00129.34 O
ATOM 6 C5' U A1909 -4.130 56.270 107.293 1.00128.85 C
ATOM 7 C4' U A1909 -5.580 56.071 107.653 1.00129.16 C
ATOM 8 O4' U A1909 -5.969 56.964 108.723 1.00129.91 O
ATOM 9 C3' U A1909 -6.576 56.371 106.558 1.00129.23 C
ATOM 10 O3' U A1909 -6.657 55.325 105.607 1.00128.56 O
ATOM 11 C2' U A1909 -7.879 56.627 107.336 1.00129.82 C
ATOM 12 O2' U A1909 -8.575 55.421 107.618 1.00129.52 O
ATOM 13 C1' U A1909 -7.360 57.203 108.654 1.00130.30 C
ATOM 14 N1 U A1909 -7.606 58.640 108.755 1.00131.03 N
ATOM 15 C2 U A1909 -8.875 58.987 109.147 1.00131.57 C
ATOM 16 O2 U A1909 -9.706 58.128 109.407 1.00131.44 O
ATOM 17 N3 U A1909 -9.093 60.352 109.236 1.00132.28 N
ATOM 18 C4 U A1909 -8.172 61.359 108.964 1.00132.47 C
ATOM 19 O4 U A1909 -8.470 62.549 109.073 1.00133.13 O
ATOM 20 C5 U A1909 -6.887 60.888 108.553 1.00131.86 C
ATOM 21 C6 U A1909 -6.656 59.576 108.457 1.00131.17 C
ATOM 22 P U A1910 -6.771 55.656 104.041 1.00 90.87 P
ATOM 23 OP1 U A1910 -6.332 54.428 103.299 1.00 90.08 O
ATOM 24 OP2 U A1910 -6.054 56.973 103.804 1.00 91.24 O
ATOM 25 O5' U A1910 -8.339 55.845 103.861 1.00 91.26 O
TER
ATOM 1 O3' U B1909 -6.657 55.325 105.607 1.00128.56 O
ATOM 2 P U B1910 -6.771 55.656 104.041 1.00 90.87 P
ATOM 3 OP1 U B1910 -6.332 54.428 103.299 1.00 90.08 O
ATOM 4 OP2 U B1910 -6.054 56.973 103.804 1.00 91.24 O
ATOM 5 O5' U B1910 -8.339 55.845 103.861 1.00 91.26 O
ATOM 6 C5' U B1910 -9.249 54.925 104.455 1.00 91.21 C
ATOM 7 C4' U B1910 -10.621 55.517 104.564 1.00 91.81 C
ATOM 8 O4' U B1910 -10.693 56.409 105.706 1.00 92.49 O
ATOM 9 C3' U B1910 -11.037 56.393 103.407 1.00 92.03 C
ATOM 10 O3' U B1910 -11.432 55.650 102.273 1.00 91.55 O
ATOM 11 C2' U B1910 -12.145 57.236 104.021 1.00 92.81 C
ATOM 12 O2' U B1910 -13.345 56.485 104.129 1.00 92.80 O
ATOM 13 C1' U B1910 -11.596 57.462 105.428 1.00 93.10 C
ATOM 14 N1 U B1910 -10.888 58.754 105.543 1.00 93.55 N
ATOM 15 C2 U B1910 -11.670 59.827 105.913 1.00 94.32 C
ATOM 16 O2 U B1910 -12.854 59.723 106.145 1.00 94.61 O
ATOM 17 N3 U B1910 -11.040 61.034 106.013 1.00 94.75 N
ATOM 18 C4 U B1910 -9.719 61.284 105.779 1.00 94.50 C
ATOM 19 O4 U B1910 -9.314 62.431 105.919 1.00 94.98 O
ATOM 20 C5 U B1910 -8.960 60.130 105.399 1.00 93.69 C
ATOM 21 C6 U B1910 -9.551 58.930 105.286 1.00 93.25 C
ATOM 22 P A B1911 -11.426 56.340 100.831 1.00 82.99 P
ATOM 23 OP1 A B1911 -11.676 55.272 99.825 1.00 82.38 O
ATOM 24 OP2 A B1911 -10.168 57.131 100.743 1.00 83.02 O
ATOM 25 O5' A B1911 -12.689 57.326 100.916 1.00 83.76 O
TER
ATOM 2 P U A1909 -1.966 56.978 108.583 1.00129.06 P
ATOM 3 OP1 U A1909 -1.853 56.762 110.053 1.00129.34 O
ATOM 4 OP2 U A1909 -1.330 55.982 107.678 1.00128.26 O
ATOM 5 O5' U A1909 -3.491 57.174 108.173 1.00129.34 O
ATOM 6 C5' U A1909 -4.130 56.270 107.293 1.00128.85 C
ATOM 7 C4' U A1909 -5.580 56.071 107.653 1.00129.16 C
ATOM 8 O4' U A1909 -5.969 56.964 108.723 1.00129.91 O
ATOM 9 C3' U A1909 -6.576 56.371 106.558 1.00129.23 C
ATOM 10 O3' U A1909 -6.657 55.325 105.607 1.00128.56 O
ATOM 11 C2' U A1909 -7.879 56.627 107.336 1.00129.82 C
ATOM 12 O2' U A1909 -8.575 55.421 107.618 1.00129.52 O
ATOM 13 C1' U A1909 -7.360 57.203 108.654 1.00130.30 C
ATOM 14 N1 U A1909 -7.606 58.640 108.755 1.00131.03 N
ATOM 15 C2 U A1909 -8.875 58.987 109.147 1.00131.57 C
ATOM 16 O2 U A1909 -9.706 58.128 109.407 1.00131.44 O
ATOM 17 N3 U A1909 -9.093 60.352 109.236 1.00132.28 N
ATOM 18 C4 U A1909 -8.172 61.359 108.964 1.00132.47 C
ATOM 19 O4 U A1909 -8.470 62.549 109.073 1.00133.13 O
ATOM 20 C5 U A1909 -6.887 60.888 108.553 1.00131.86 C
ATOM 21 C6 U A1909 -6.656 59.576 108.457 1.00131.17 C
ATOM 22 P U A1910 -6.771 55.656 104.041 1.00 90.87 P
ATOM 23 OP1 U A1910 -6.332 54.428 103.299 1.00 90.08 O
ATOM 24 OP2 U A1910 -6.054 56.973 103.804 1.00 91.24 O
ATOM 25 O5' U A1910 -8.339 55.845 103.861 1.00 91.26 O
TER
ATOM 1 O3' U B1909 -6.657 55.325 105.607 1.00128.56 O
ATOM 2 P U B1910 -6.771 55.656 104.041 1.00 90.87 P
ATOM 3 OP1 U B1910 -6.332 54.428 103.299 1.00 90.08 O
ATOM 4 OP2 U B1910 -6.054 56.973 103.804 1.00 91.24 O
ATOM 5 O5' U B1910 -8.339 55.845 103.861 1.00 91.26 O
ATOM 6 C5' U B1910 -9.249 54.925 104.455 1.00 91.21 C
ATOM 7 C4' U B1910 -10.621 55.517 104.564 1.00 91.81 C
ATOM 8 O4' U B1910 -10.693 56.409 105.706 1.00 92.49 O
ATOM 9 C3' U B1910 -11.037 56.393 103.407 1.00 92.03 C
ATOM 10 O3' U B1910 -11.432 55.650 102.273 1.00 91.55 O
ATOM 11 C2' U B1910 -12.145 57.236 104.021 1.00 92.81 C
ATOM 12 O2' U B1910 -13.345 56.485 104.129 1.00 92.80 O
ATOM 13 C1' U B1910 -11.596 57.462 105.428 1.00 93.10 C
ATOM 14 N1 U B1910 -10.888 58.754 105.543 1.00 93.55 N
ATOM 15 C2 U B1910 -11.670 59.827 105.913 1.00 94.32 C
ATOM 16 O2 U B1910 -12.854 59.723 106.145 1.00 94.61 O
ATOM 17 N3 U B1910 -11.040 61.034 106.013 1.00 94.75 N
ATOM 18 C4 U B1910 -9.719 61.284 105.779 1.00 94.50 C
ATOM 19 O4 U B1910 -9.314 62.431 105.919 1.00 94.98 O
ATOM 20 C5 U B1910 -8.960 60.130 105.399 1.00 93.69 C
ATOM 21 C6 U B1910 -9.551 58.930 105.286 1.00 93.25 C
ATOM 22 P A B1911 -11.426 56.340 100.831 1.00 82.99 P
ATOM 23 OP1 A B1911 -11.676 55.272 99.825 1.00 82.38 O
ATOM 24 OP2 A B1911 -10.168 57.131 100.743 1.00 83.02 O
ATOM 25 O5' A B1911 -12.689 57.326 100.916 1.00 83.76 O
TER
Atoms:
C4: (-8.172,61.359,108.964)
N3: (-9.093,60.352,109.236)
OP1: (-1.853,56.762,110.053)
OP2: (-1.330,55.982,107.678)
C2: (-8.875,58.987,109.147)
C1': (-7.360,57.203,108.654)
C3': (-6.576,56.371,106.558)
O5': (-3.491,57.174,108.173)
O4': (-5.969,56.964,108.723)
C5': (-4.130,56.270,107.293)
P: (-1.966,56.978,108.583)
C4': (-5.580,56.071,107.653)
C2': (-7.879,56.627,107.336)
O2': (-8.575,55.421,107.618)
N1: (-7.606,58.640,108.755)
O4: (-8.470,62.549,109.073)
O2: (-9.706,58.128,109.407)
C6: (-6.656,59.576,108.457)
C5: (-6.887,60.888,108.553)
O3': (-6.657,55.325,105.607)
N3: (-9.093,60.352,109.236)
OP1: (-1.853,56.762,110.053)
OP2: (-1.330,55.982,107.678)
C2: (-8.875,58.987,109.147)
C1': (-7.360,57.203,108.654)
C3': (-6.576,56.371,106.558)
O5': (-3.491,57.174,108.173)
O4': (-5.969,56.964,108.723)
C5': (-4.130,56.270,107.293)
P: (-1.966,56.978,108.583)
C4': (-5.580,56.071,107.653)
C2': (-7.879,56.627,107.336)
O2': (-8.575,55.421,107.618)
N1: (-7.606,58.640,108.755)
O4: (-8.470,62.549,109.073)
O2: (-9.706,58.128,109.407)
C6: (-6.656,59.576,108.457)
C5: (-6.887,60.888,108.553)
O3': (-6.657,55.325,105.607)
C4: (-9.719,61.284,105.779)
N3: (-11.040,61.034,106.013)
OP1: (-6.332,54.428,103.299)
OP2: (-6.054,56.973,103.804)
C2: (-11.670,59.827,105.913)
C1': (-11.596,57.462,105.428)
C3': (-11.037,56.393,103.407)
O5': (-8.339,55.845,103.861)
O4': (-10.693,56.409,105.706)
C5': (-9.249,54.925,104.455)
P: (-6.771,55.656,104.041)
C4': (-10.621,55.517,104.564)
C2': (-12.145,57.236,104.021)
O2': (-13.345,56.485,104.129)
N1: (-10.888,58.754,105.543)
O4: (-9.314,62.431,105.919)
O2: (-12.854,59.723,106.145)
C6: (-9.551,58.930,105.286)
C5: (-8.960,60.130,105.399)
O3': (-11.432,55.650,102.273)
N3: (-11.040,61.034,106.013)
OP1: (-6.332,54.428,103.299)
OP2: (-6.054,56.973,103.804)
C2: (-11.670,59.827,105.913)
C1': (-11.596,57.462,105.428)
C3': (-11.037,56.393,103.407)
O5': (-8.339,55.845,103.861)
O4': (-10.693,56.409,105.706)
C5': (-9.249,54.925,104.455)
P: (-6.771,55.656,104.041)
C4': (-10.621,55.517,104.564)
C2': (-12.145,57.236,104.021)
O2': (-13.345,56.485,104.129)
N1: (-10.888,58.754,105.543)
O4: (-9.314,62.431,105.919)
O2: (-12.854,59.723,106.145)
C6: (-9.551,58.930,105.286)
C5: (-8.960,60.130,105.399)
O3': (-11.432,55.650,102.273)
Image (generated by PyMOL):