Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3ND3:A11:A12
Extra
PDB:
ATOM 1 O3' U A 10 -2.204 11.845 -9.837 1.00 28.76 O
ATOM 2 P U A 11 -1.907 12.362 -11.332 1.00 28.87 P
ATOM 3 OP1 U A 11 -3.101 12.006 -12.144 1.00 31.29 O
ATOM 4 OP2 U A 11 -0.592 11.861 -11.754 1.00 30.84 O
ATOM 5 O5' U A 11 -1.825 13.943 -11.168 1.00 26.48 O
ATOM 6 C5' U A 11 -2.960 14.708 -10.802 1.00 28.84 C
ATOM 7 C4' U A 11 -2.576 16.141 -10.556 1.00 26.52 C
ATOM 8 O4' U A 11 -1.718 16.259 -9.386 1.00 26.35 O
ATOM 9 C3' U A 11 -1.764 16.804 -11.646 1.00 23.60 C
ATOM 10 O3' U A 11 -2.564 17.162 -12.737 1.00 24.06 O
ATOM 11 C2' U A 11 -1.182 17.988 -10.909 1.00 25.47 C
ATOM 12 O2' U A 11 -2.182 18.967 -10.659 1.00 26.68 O
ATOM 13 C1' U A 11 -0.803 17.327 -9.594 1.00 25.26 C
ATOM 14 N1 U A 11 0.571 16.777 -9.651 1.00 24.08 N
ATOM 15 C2 U A 11 1.604 17.685 -9.424 1.00 24.08 C
ATOM 16 O2 U A 11 1.410 18.878 -9.198 1.00 24.61 O
ATOM 17 N3 U A 11 2.866 17.155 -9.499 1.00 24.99 N
ATOM 18 C4 U A 11 3.184 15.847 -9.756 1.00 25.81 C
ATOM 19 O4 U A 11 4.344 15.543 -9.764 1.00 26.85 O
ATOM 20 C5 U A 11 2.090 14.958 -9.991 1.00 26.57 C
ATOM 21 C6 U A 11 0.859 15.455 -9.915 1.00 25.69 C
ATOM 22 P U A 12 -2.029 17.059 -14.236 1.00 23.17 P
ATOM 23 OP1 U A 12 -3.216 17.268 -15.084 1.00 23.94 O
ATOM 24 OP2 U A 12 -1.264 15.814 -14.373 1.00 24.31 O
ATOM 25 O5' U A 12 -1.021 18.307 -14.337 1.00 22.08 O
TER
ATOM 1 O3' U B 11 -2.564 17.162 -12.737 1.00 24.06 O
ATOM 2 P U B 12 -2.029 17.059 -14.236 1.00 23.17 P
ATOM 3 OP1 U B 12 -3.216 17.268 -15.084 1.00 23.94 O
ATOM 4 OP2 U B 12 -1.264 15.814 -14.373 1.00 24.31 O
ATOM 5 O5' U B 12 -1.021 18.307 -14.337 1.00 22.08 O
ATOM 6 C5' U B 12 -1.468 19.632 -14.156 1.00 21.24 C
ATOM 7 C4' U B 12 -0.318 20.567 -13.939 1.00 20.29 C
ATOM 8 O4' U B 12 0.408 20.164 -12.751 1.00 21.97 O
ATOM 9 C3' U B 12 0.767 20.591 -15.022 1.00 20.57 C
ATOM 10 O3' U B 12 0.385 21.362 -16.166 1.00 21.96 O
ATOM 11 C2' U B 12 1.958 21.155 -14.250 1.00 21.80 C
ATOM 12 O2' U B 12 1.766 22.540 -13.996 1.00 23.88 O
ATOM 13 C1' U B 12 1.784 20.428 -12.911 1.00 21.75 C
ATOM 14 N1 U B 12 2.520 19.149 -12.866 1.00 22.97 N
ATOM 15 C2 U B 12 3.869 19.271 -12.603 1.00 22.05 C
ATOM 16 O2 U B 12 4.442 20.347 -12.393 1.00 22.39 O
ATOM 17 N3 U B 12 4.572 18.105 -12.610 1.00 24.13 N
ATOM 18 C4 U B 12 4.058 16.852 -12.858 1.00 26.49 C
ATOM 19 O4 U B 12 4.813 15.871 -12.810 1.00 26.69 O
ATOM 20 C5 U B 12 2.655 16.783 -13.138 1.00 27.13 C
ATOM 21 C6 U B 12 1.941 17.928 -13.146 1.00 25.98 C
ATOM 22 P U B 13 1.086 21.132 -17.587 1.00 21.10 P
ATOM 23 OP1 U B 13 0.252 21.910 -18.556 1.00 22.98 O
ATOM 24 OP2 U B 13 1.282 19.671 -17.781 1.00 23.18 O
ATOM 25 O5' U B 13 2.520 21.806 -17.410 1.00 21.36 O
TER
ATOM 2 P U A 11 -1.907 12.362 -11.332 1.00 28.87 P
ATOM 3 OP1 U A 11 -3.101 12.006 -12.144 1.00 31.29 O
ATOM 4 OP2 U A 11 -0.592 11.861 -11.754 1.00 30.84 O
ATOM 5 O5' U A 11 -1.825 13.943 -11.168 1.00 26.48 O
ATOM 6 C5' U A 11 -2.960 14.708 -10.802 1.00 28.84 C
ATOM 7 C4' U A 11 -2.576 16.141 -10.556 1.00 26.52 C
ATOM 8 O4' U A 11 -1.718 16.259 -9.386 1.00 26.35 O
ATOM 9 C3' U A 11 -1.764 16.804 -11.646 1.00 23.60 C
ATOM 10 O3' U A 11 -2.564 17.162 -12.737 1.00 24.06 O
ATOM 11 C2' U A 11 -1.182 17.988 -10.909 1.00 25.47 C
ATOM 12 O2' U A 11 -2.182 18.967 -10.659 1.00 26.68 O
ATOM 13 C1' U A 11 -0.803 17.327 -9.594 1.00 25.26 C
ATOM 14 N1 U A 11 0.571 16.777 -9.651 1.00 24.08 N
ATOM 15 C2 U A 11 1.604 17.685 -9.424 1.00 24.08 C
ATOM 16 O2 U A 11 1.410 18.878 -9.198 1.00 24.61 O
ATOM 17 N3 U A 11 2.866 17.155 -9.499 1.00 24.99 N
ATOM 18 C4 U A 11 3.184 15.847 -9.756 1.00 25.81 C
ATOM 19 O4 U A 11 4.344 15.543 -9.764 1.00 26.85 O
ATOM 20 C5 U A 11 2.090 14.958 -9.991 1.00 26.57 C
ATOM 21 C6 U A 11 0.859 15.455 -9.915 1.00 25.69 C
ATOM 22 P U A 12 -2.029 17.059 -14.236 1.00 23.17 P
ATOM 23 OP1 U A 12 -3.216 17.268 -15.084 1.00 23.94 O
ATOM 24 OP2 U A 12 -1.264 15.814 -14.373 1.00 24.31 O
ATOM 25 O5' U A 12 -1.021 18.307 -14.337 1.00 22.08 O
TER
ATOM 1 O3' U B 11 -2.564 17.162 -12.737 1.00 24.06 O
ATOM 2 P U B 12 -2.029 17.059 -14.236 1.00 23.17 P
ATOM 3 OP1 U B 12 -3.216 17.268 -15.084 1.00 23.94 O
ATOM 4 OP2 U B 12 -1.264 15.814 -14.373 1.00 24.31 O
ATOM 5 O5' U B 12 -1.021 18.307 -14.337 1.00 22.08 O
ATOM 6 C5' U B 12 -1.468 19.632 -14.156 1.00 21.24 C
ATOM 7 C4' U B 12 -0.318 20.567 -13.939 1.00 20.29 C
ATOM 8 O4' U B 12 0.408 20.164 -12.751 1.00 21.97 O
ATOM 9 C3' U B 12 0.767 20.591 -15.022 1.00 20.57 C
ATOM 10 O3' U B 12 0.385 21.362 -16.166 1.00 21.96 O
ATOM 11 C2' U B 12 1.958 21.155 -14.250 1.00 21.80 C
ATOM 12 O2' U B 12 1.766 22.540 -13.996 1.00 23.88 O
ATOM 13 C1' U B 12 1.784 20.428 -12.911 1.00 21.75 C
ATOM 14 N1 U B 12 2.520 19.149 -12.866 1.00 22.97 N
ATOM 15 C2 U B 12 3.869 19.271 -12.603 1.00 22.05 C
ATOM 16 O2 U B 12 4.442 20.347 -12.393 1.00 22.39 O
ATOM 17 N3 U B 12 4.572 18.105 -12.610 1.00 24.13 N
ATOM 18 C4 U B 12 4.058 16.852 -12.858 1.00 26.49 C
ATOM 19 O4 U B 12 4.813 15.871 -12.810 1.00 26.69 O
ATOM 20 C5 U B 12 2.655 16.783 -13.138 1.00 27.13 C
ATOM 21 C6 U B 12 1.941 17.928 -13.146 1.00 25.98 C
ATOM 22 P U B 13 1.086 21.132 -17.587 1.00 21.10 P
ATOM 23 OP1 U B 13 0.252 21.910 -18.556 1.00 22.98 O
ATOM 24 OP2 U B 13 1.282 19.671 -17.781 1.00 23.18 O
ATOM 25 O5' U B 13 2.520 21.806 -17.410 1.00 21.36 O
TER
Atoms:
C4: (3.184,15.847,-9.756)
N3: (2.866,17.155,-9.499)
OP1: (-3.101,12.006,-12.144)
OP2: (-0.592,11.861,-11.754)
C2: (1.604,17.685,-9.424)
C1': (-0.803,17.327,-9.594)
C3': (-1.764,16.804,-11.646)
O5': (-1.825,13.943,-11.168)
O4': (-1.718,16.259,-9.386)
C5': (-2.960,14.708,-10.802)
P: (-1.907,12.362,-11.332)
C4': (-2.576,16.141,-10.556)
C2': (-1.182,17.988,-10.909)
O2': (-2.182,18.967,-10.659)
N1: (0.571,16.777,-9.651)
O4: (4.344,15.543,-9.764)
O2: (1.410,18.878,-9.198)
C6: (0.859,15.455,-9.915)
C5: (2.090,14.958,-9.991)
O3': (-2.564,17.162,-12.737)
N3: (2.866,17.155,-9.499)
OP1: (-3.101,12.006,-12.144)
OP2: (-0.592,11.861,-11.754)
C2: (1.604,17.685,-9.424)
C1': (-0.803,17.327,-9.594)
C3': (-1.764,16.804,-11.646)
O5': (-1.825,13.943,-11.168)
O4': (-1.718,16.259,-9.386)
C5': (-2.960,14.708,-10.802)
P: (-1.907,12.362,-11.332)
C4': (-2.576,16.141,-10.556)
C2': (-1.182,17.988,-10.909)
O2': (-2.182,18.967,-10.659)
N1: (0.571,16.777,-9.651)
O4: (4.344,15.543,-9.764)
O2: (1.410,18.878,-9.198)
C6: (0.859,15.455,-9.915)
C5: (2.090,14.958,-9.991)
O3': (-2.564,17.162,-12.737)
C4: (4.058,16.852,-12.858)
N3: (4.572,18.105,-12.610)
OP1: (-3.216,17.268,-15.084)
OP2: (-1.264,15.814,-14.373)
C2: (3.869,19.271,-12.603)
C1': (1.784,20.428,-12.911)
C3': (0.767,20.591,-15.022)
O5': (-1.021,18.307,-14.337)
O4': (0.408,20.164,-12.751)
C5': (-1.468,19.632,-14.156)
P: (-2.029,17.059,-14.236)
C4': (-0.318,20.567,-13.939)
C2': (1.958,21.155,-14.250)
O2': (1.766,22.540,-13.996)
N1: (2.520,19.149,-12.866)
O4: (4.813,15.871,-12.810)
O2: (4.442,20.347,-12.393)
C6: (1.941,17.928,-13.146)
C5: (2.655,16.783,-13.138)
O3': (0.385,21.362,-16.166)
N3: (4.572,18.105,-12.610)
OP1: (-3.216,17.268,-15.084)
OP2: (-1.264,15.814,-14.373)
C2: (3.869,19.271,-12.603)
C1': (1.784,20.428,-12.911)
C3': (0.767,20.591,-15.022)
O5': (-1.021,18.307,-14.337)
O4': (0.408,20.164,-12.751)
C5': (-1.468,19.632,-14.156)
P: (-2.029,17.059,-14.236)
C4': (-0.318,20.567,-13.939)
C2': (1.958,21.155,-14.250)
O2': (1.766,22.540,-13.996)
N1: (2.520,19.149,-12.866)
O4: (4.813,15.871,-12.810)
O2: (4.442,20.347,-12.393)
C6: (1.941,17.928,-13.146)
C5: (2.655,16.783,-13.138)
O3': (0.385,21.362,-16.166)
Image (generated by PyMOL):