ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:02018:02017

Extra

PDB:
ATOM 1 O3' C A2017 48.675 109.996 103.247 1.00 52.70 O
ATOM 2 P G A2018 47.828 110.616 104.461 1.00 53.96 P
ATOM 3 OP1 G A2018 47.003 109.531 105.072 1.00 56.01 O
ATOM 4 OP2 G A2018 47.173 111.862 103.981 1.00 55.46 O
ATOM 5 O5' G A2018 48.956 111.040 105.486 1.00 52.28 O
ATOM 6 C5' G A2018 48.723 111.010 106.892 1.00 49.28 C
ATOM 7 C4' G A2018 49.987 110.618 107.597 1.00 46.19 C
ATOM 8 O4' G A2018 50.179 109.180 107.486 1.00 45.78 O
ATOM 9 C3' G A2018 51.243 111.264 107.034 1.00 47.25 C
ATOM 10 O3' G A2018 52.099 111.618 108.104 1.00 47.70 O
ATOM 11 C2' G A2018 51.818 110.159 106.143 1.00 45.75 C
ATOM 12 O2' G A2018 53.209 110.250 105.936 1.00 47.35 O
ATOM 13 C1' G A2018 51.449 108.904 106.931 1.00 42.42 C
ATOM 14 N9 G A2018 51.342 107.676 106.138 1.00 40.14 N
ATOM 15 C8 G A2018 50.316 107.317 105.296 1.00 37.86 C
ATOM 16 N7 G A2018 50.500 106.155 104.728 1.00 35.37 N
ATOM 17 C5 G A2018 51.717 105.716 105.222 1.00 36.37 C
ATOM 18 C6 G A2018 52.440 104.515 104.960 1.00 37.74 C
ATOM 19 O6 G A2018 52.132 103.576 104.223 1.00 38.26 O
ATOM 20 N1 G A2018 53.638 104.475 105.664 1.00 37.23 N
ATOM 21 C2 G A2018 54.086 105.460 106.510 1.00 37.94 C
ATOM 22 N2 G A2018 55.283 105.254 107.074 1.00 35.88 N
ATOM 23 N3 G A2018 53.416 106.573 106.774 1.00 37.39 N
ATOM 24 C4 G A2018 52.253 106.638 106.095 1.00 37.33 C
ATOM 25 P G A2019 52.611 113.136 108.239 1.00 47.34 P
ATOM 26 OP1 G A2019 53.353 113.462 107.006 1.00 43.84 O
ATOM 27 OP2 G A2019 53.268 113.300 109.563 1.00 49.96 O
ATOM 28 O5' G A2019 51.293 114.019 108.295 1.00 43.60 O
TER

ATOM 1 O3' G B2016 43.843 107.414 103.958 1.00 38.23 O
ATOM 2 P C B2017 45.104 106.433 103.757 1.00 40.47 P
ATOM 3 OP1 C B2017 44.635 105.424 102.789 1.00 37.32 O
ATOM 4 OP2 C B2017 45.627 105.987 105.079 1.00 39.64 O
ATOM 5 O5' C B2017 46.201 107.367 103.065 1.00 41.27 O
ATOM 6 C5' C B2017 47.592 107.000 103.047 1.00 41.91 C
ATOM 7 C4' C B2017 48.369 107.908 102.110 1.00 45.48 C
ATOM 8 O4' C B2017 48.124 107.578 100.723 1.00 43.29 O
ATOM 9 C3' C B2017 48.013 109.384 102.146 1.00 46.62 C
ATOM 10 O3' C B2017 48.675 109.996 103.247 1.00 52.70 O
ATOM 11 C2' C B2017 48.626 109.902 100.841 1.00 46.35 C
ATOM 12 O2' C B2017 49.985 110.254 100.995 1.00 47.36 O
ATOM 13 C1' C B2017 48.569 108.663 99.938 1.00 43.72 C
ATOM 14 N1 C B2017 47.784 108.732 98.693 1.00 42.25 N
ATOM 15 C2 C B2017 48.445 108.487 97.474 1.00 41.13 C
ATOM 16 O2 C B2017 49.669 108.314 97.479 1.00 40.57 O
ATOM 17 N3 C B2017 47.734 108.453 96.327 1.00 39.94 N
ATOM 18 C4 C B2017 46.417 108.666 96.354 1.00 41.68 C
ATOM 19 N4 C B2017 45.749 108.561 95.204 1.00 36.16 N
ATOM 20 C5 C B2017 45.725 108.978 97.570 1.00 41.09 C
ATOM 21 C6 C B2017 46.442 108.999 98.705 1.00 41.43 C
ATOM 22 P G B2018 47.828 110.616 104.461 1.00 53.96 P
ATOM 23 OP1 G B2018 47.003 109.531 105.072 1.00 56.01 O
ATOM 24 OP2 G B2018 47.173 111.862 103.981 1.00 55.46 O
ATOM 25 O5' G B2018 48.956 111.040 105.486 1.00 52.28 O
TER

Atoms:
OP1: (47.003,109.531,105.072)
OP2: (47.173,111.862,103.981)
C3': (51.243,111.264,107.034)
C1': (51.449,108.904,106.931)
C5': (48.723,111.010,106.892)
O6: (52.132,103.576,104.223)
O4': (50.179,109.180,107.486)
C8: (50.316,107.317,105.296)
C2: (54.086,105.460,106.510)
C6: (52.440,104.515,104.960)
C5: (51.717,105.716,105.222)
C4: (52.253,106.638,106.095)
P: (47.828,110.616,104.461)
C4': (49.987,110.618,107.597)
C2': (51.818,110.159,106.143)
O2': (53.209,110.250,105.936)
N1: (53.638,104.475,105.664)
N2: (55.283,105.254,107.074)
N3: (53.416,106.573,106.774)
N7: (50.500,106.155,104.728)
N9: (51.342,107.676,106.138)
O5': (48.956,111.040,105.486)
O3': (52.099,111.618,108.104)
C2: (48.445,108.487,97.474)
OP1: (44.635,105.424,102.789)
OP2: (45.627,105.987,105.079)
C4: (46.417,108.666,96.354)
O5': (46.201,107.367,103.065)
C3': (48.013,109.384,102.146)
C1': (48.569,108.663,99.938)
O4': (48.124,107.578,100.723)
C5': (47.592,107.000,103.047)
P: (45.104,106.433,103.757)
O2: (49.669,108.314,97.479)
C4': (48.369,107.908,102.110)
C2': (48.626,109.902,100.841)
O2': (49.985,110.254,100.995)
N1: (47.784,108.732,98.693)
N3: (47.734,108.453,96.327)
N4: (45.749,108.561,95.204)
C6: (46.442,108.999,98.705)
C5: (45.725,108.978,97.570)
O3': (48.675,109.996,103.247)
Image (generated by PyMOL):
PyMOL image
show in jmol