Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13052:13053
Extra
PDB:
ATOM 1 O3' A A3051 54.094 59.652 66.466 1.00 67.01 O
ATOM 2 P U A3052 52.489 59.760 66.440 1.00 58.08 P
ATOM 3 OP1 U A3052 52.039 59.699 67.855 1.00 58.10 O
ATOM 4 OP2 U A3052 51.998 58.752 65.494 1.00 57.61 O
ATOM 5 O5' U A3052 52.234 61.223 65.847 1.00 58.69 O
ATOM 6 C5' U A3052 52.562 62.378 66.609 1.00 59.23 C
ATOM 7 C4' U A3052 52.353 63.672 65.842 1.00 59.77 C
ATOM 8 O4' U A3052 53.243 63.753 64.692 1.00 59.79 O
ATOM 9 C3' U A3052 50.991 63.904 65.239 1.00 59.84 C
ATOM 10 O3' U A3052 50.020 64.246 66.203 1.00 60.01 O
ATOM 11 C2' U A3052 51.293 65.018 64.256 1.00 60.32 C
ATOM 12 O2' U A3052 51.502 66.229 64.946 1.00 60.90 O
ATOM 13 C1' U A3052 52.643 64.561 63.700 1.00 60.12 C
ATOM 14 N1 U A3052 52.469 63.765 62.484 1.00 59.74 N
ATOM 15 C2 U A3052 52.143 64.458 61.351 1.00 60.03 C
ATOM 16 O2 U A3052 52.032 65.675 61.323 1.00 60.59 O
ATOM 17 N3 U A3052 51.954 63.660 60.248 1.00 59.67 N
ATOM 18 C4 U A3052 52.028 62.296 60.126 1.00 59.06 C
ATOM 19 O4 U A3052 51.809 61.760 59.045 1.00 58.83 O
ATOM 20 C5 U A3052 52.378 61.673 61.350 1.00 58.80 C
ATOM 21 C6 U A3052 52.571 62.403 62.458 1.00 59.13 C
ATOM 22 P U A3053 48.602 63.478 66.230 1.00 64.41 P
ATOM 23 OP1 U A3053 47.950 63.836 67.521 1.00 64.62 O
ATOM 24 OP2 U A3053 48.856 62.040 65.933 1.00 63.76 O
ATOM 25 O5' U A3053 47.812 64.129 65.014 1.00 64.67 O
TER
ATOM 1 O3' U B3052 50.020 64.246 66.203 1.00 60.01 O
ATOM 2 P U B3053 48.602 63.478 66.230 1.00 64.41 P
ATOM 3 OP1 U B3053 47.950 63.836 67.521 1.00 64.62 O
ATOM 4 OP2 U B3053 48.856 62.040 65.933 1.00 63.76 O
ATOM 5 O5' U B3053 47.812 64.129 65.014 1.00 64.67 O
ATOM 6 C5' U B3053 47.639 65.527 64.928 1.00 65.31 C
ATOM 7 C4' U B3053 47.405 65.954 63.509 1.00 65.48 C
ATOM 8 O4' U B3053 48.507 65.514 62.674 1.00 65.26 O
ATOM 9 C3' U B3053 46.197 65.352 62.835 1.00 65.20 C
ATOM 10 O3' U B3053 44.983 65.954 63.232 1.00 65.51 O
ATOM 11 C2' U B3053 46.533 65.524 61.357 1.00 65.27 C
ATOM 12 O2' U B3053 46.304 66.854 60.940 1.00 65.89 O
ATOM 13 C1' U B3053 48.044 65.271 61.364 1.00 65.14 C
ATOM 14 N1 U B3053 48.377 63.887 61.009 1.00 64.51 N
ATOM 15 C2 U B3053 48.258 63.470 59.717 1.00 64.32 C
ATOM 16 O2 U B3053 47.893 64.138 58.820 1.00 64.64 O
ATOM 17 N3 U B3053 48.574 62.198 59.460 1.00 63.76 N
ATOM 18 C4 U B3053 48.994 61.292 60.384 1.00 63.35 C
ATOM 19 O4 U B3053 49.238 60.177 59.980 1.00 62.88 O
ATOM 20 C5 U B3053 49.093 61.758 61.729 1.00 63.56 C
ATOM 21 C6 U B3053 48.798 63.035 61.987 1.00 64.13 C
ATOM 22 P U B3054 43.644 65.075 63.342 1.00 62.57 P
ATOM 23 OP1 U B3054 42.699 65.851 64.173 1.00 62.97 O
ATOM 24 OP2 U B3054 44.019 63.714 63.776 1.00 61.95 O
ATOM 25 O5' U B3054 43.130 65.042 61.848 1.00 62.56 O
TER
ATOM 2 P U A3052 52.489 59.760 66.440 1.00 58.08 P
ATOM 3 OP1 U A3052 52.039 59.699 67.855 1.00 58.10 O
ATOM 4 OP2 U A3052 51.998 58.752 65.494 1.00 57.61 O
ATOM 5 O5' U A3052 52.234 61.223 65.847 1.00 58.69 O
ATOM 6 C5' U A3052 52.562 62.378 66.609 1.00 59.23 C
ATOM 7 C4' U A3052 52.353 63.672 65.842 1.00 59.77 C
ATOM 8 O4' U A3052 53.243 63.753 64.692 1.00 59.79 O
ATOM 9 C3' U A3052 50.991 63.904 65.239 1.00 59.84 C
ATOM 10 O3' U A3052 50.020 64.246 66.203 1.00 60.01 O
ATOM 11 C2' U A3052 51.293 65.018 64.256 1.00 60.32 C
ATOM 12 O2' U A3052 51.502 66.229 64.946 1.00 60.90 O
ATOM 13 C1' U A3052 52.643 64.561 63.700 1.00 60.12 C
ATOM 14 N1 U A3052 52.469 63.765 62.484 1.00 59.74 N
ATOM 15 C2 U A3052 52.143 64.458 61.351 1.00 60.03 C
ATOM 16 O2 U A3052 52.032 65.675 61.323 1.00 60.59 O
ATOM 17 N3 U A3052 51.954 63.660 60.248 1.00 59.67 N
ATOM 18 C4 U A3052 52.028 62.296 60.126 1.00 59.06 C
ATOM 19 O4 U A3052 51.809 61.760 59.045 1.00 58.83 O
ATOM 20 C5 U A3052 52.378 61.673 61.350 1.00 58.80 C
ATOM 21 C6 U A3052 52.571 62.403 62.458 1.00 59.13 C
ATOM 22 P U A3053 48.602 63.478 66.230 1.00 64.41 P
ATOM 23 OP1 U A3053 47.950 63.836 67.521 1.00 64.62 O
ATOM 24 OP2 U A3053 48.856 62.040 65.933 1.00 63.76 O
ATOM 25 O5' U A3053 47.812 64.129 65.014 1.00 64.67 O
TER
ATOM 1 O3' U B3052 50.020 64.246 66.203 1.00 60.01 O
ATOM 2 P U B3053 48.602 63.478 66.230 1.00 64.41 P
ATOM 3 OP1 U B3053 47.950 63.836 67.521 1.00 64.62 O
ATOM 4 OP2 U B3053 48.856 62.040 65.933 1.00 63.76 O
ATOM 5 O5' U B3053 47.812 64.129 65.014 1.00 64.67 O
ATOM 6 C5' U B3053 47.639 65.527 64.928 1.00 65.31 C
ATOM 7 C4' U B3053 47.405 65.954 63.509 1.00 65.48 C
ATOM 8 O4' U B3053 48.507 65.514 62.674 1.00 65.26 O
ATOM 9 C3' U B3053 46.197 65.352 62.835 1.00 65.20 C
ATOM 10 O3' U B3053 44.983 65.954 63.232 1.00 65.51 O
ATOM 11 C2' U B3053 46.533 65.524 61.357 1.00 65.27 C
ATOM 12 O2' U B3053 46.304 66.854 60.940 1.00 65.89 O
ATOM 13 C1' U B3053 48.044 65.271 61.364 1.00 65.14 C
ATOM 14 N1 U B3053 48.377 63.887 61.009 1.00 64.51 N
ATOM 15 C2 U B3053 48.258 63.470 59.717 1.00 64.32 C
ATOM 16 O2 U B3053 47.893 64.138 58.820 1.00 64.64 O
ATOM 17 N3 U B3053 48.574 62.198 59.460 1.00 63.76 N
ATOM 18 C4 U B3053 48.994 61.292 60.384 1.00 63.35 C
ATOM 19 O4 U B3053 49.238 60.177 59.980 1.00 62.88 O
ATOM 20 C5 U B3053 49.093 61.758 61.729 1.00 63.56 C
ATOM 21 C6 U B3053 48.798 63.035 61.987 1.00 64.13 C
ATOM 22 P U B3054 43.644 65.075 63.342 1.00 62.57 P
ATOM 23 OP1 U B3054 42.699 65.851 64.173 1.00 62.97 O
ATOM 24 OP2 U B3054 44.019 63.714 63.776 1.00 61.95 O
ATOM 25 O5' U B3054 43.130 65.042 61.848 1.00 62.56 O
TER
Atoms:
C4: (52.028,62.296,60.126)
N3: (51.954,63.660,60.248)
OP1: (52.039,59.699,67.855)
OP2: (51.998,58.752,65.494)
C2: (52.143,64.458,61.351)
C1': (52.643,64.561,63.700)
C3': (50.991,63.904,65.239)
O5': (52.234,61.223,65.847)
O4': (53.243,63.753,64.692)
C5': (52.562,62.378,66.609)
P: (52.489,59.760,66.440)
C4': (52.353,63.672,65.842)
C2': (51.293,65.018,64.256)
O2': (51.502,66.229,64.946)
N1: (52.469,63.765,62.484)
O4: (51.809,61.760,59.045)
O2: (52.032,65.675,61.323)
C6: (52.571,62.403,62.458)
C5: (52.378,61.673,61.350)
O3': (50.020,64.246,66.203)
N3: (51.954,63.660,60.248)
OP1: (52.039,59.699,67.855)
OP2: (51.998,58.752,65.494)
C2: (52.143,64.458,61.351)
C1': (52.643,64.561,63.700)
C3': (50.991,63.904,65.239)
O5': (52.234,61.223,65.847)
O4': (53.243,63.753,64.692)
C5': (52.562,62.378,66.609)
P: (52.489,59.760,66.440)
C4': (52.353,63.672,65.842)
C2': (51.293,65.018,64.256)
O2': (51.502,66.229,64.946)
N1: (52.469,63.765,62.484)
O4: (51.809,61.760,59.045)
O2: (52.032,65.675,61.323)
C6: (52.571,62.403,62.458)
C5: (52.378,61.673,61.350)
O3': (50.020,64.246,66.203)
C4: (48.994,61.292,60.384)
N3: (48.574,62.198,59.460)
OP1: (47.950,63.836,67.521)
OP2: (48.856,62.040,65.933)
C2: (48.258,63.470,59.717)
C1': (48.044,65.271,61.364)
C3': (46.197,65.352,62.835)
O5': (47.812,64.129,65.014)
O4': (48.507,65.514,62.674)
C5': (47.639,65.527,64.928)
P: (48.602,63.478,66.230)
C4': (47.405,65.954,63.509)
C2': (46.533,65.524,61.357)
O2': (46.304,66.854,60.940)
N1: (48.377,63.887,61.009)
O4: (49.238,60.177,59.980)
O2: (47.893,64.138,58.820)
C6: (48.798,63.035,61.987)
C5: (49.093,61.758,61.729)
O3': (44.983,65.954,63.232)
N3: (48.574,62.198,59.460)
OP1: (47.950,63.836,67.521)
OP2: (48.856,62.040,65.933)
C2: (48.258,63.470,59.717)
C1': (48.044,65.271,61.364)
C3': (46.197,65.352,62.835)
O5': (47.812,64.129,65.014)
O4': (48.507,65.514,62.674)
C5': (47.639,65.527,64.928)
P: (48.602,63.478,66.230)
C4': (47.405,65.954,63.509)
C2': (46.533,65.524,61.357)
O2': (46.304,66.854,60.940)
N1: (48.377,63.887,61.009)
O4: (49.238,60.177,59.980)
O2: (47.893,64.138,58.820)
C6: (48.798,63.035,61.987)
C5: (49.093,61.758,61.729)
O3': (44.983,65.954,63.232)
Image (generated by PyMOL):