Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:S38:S39
Extra
PDB:
ATOM 1 O3' G A 37 4.238 -8.480 87.894 1.00 71.66 O
ATOM 2 P U A 38 4.379 -10.079 87.866 1.00 71.96 P
ATOM 3 OP1 U A 38 5.818 -10.400 87.714 1.00 71.87 O
ATOM 4 OP2 U A 38 3.409 -10.628 86.889 1.00 71.43 O
ATOM 5 O5' U A 38 3.927 -10.490 89.348 1.00 72.11 O
ATOM 6 C5' U A 38 4.744 -10.162 90.475 1.00 72.65 C
ATOM 7 C4' U A 38 3.927 -9.975 91.743 1.00 73.07 C
ATOM 8 O4' U A 38 2.849 -9.025 91.528 1.00 73.28 O
ATOM 9 C3' U A 38 3.201 -11.211 92.251 1.00 73.25 C
ATOM 10 O3' U A 38 4.081 -12.094 92.933 1.00 73.54 O
ATOM 11 C2' U A 38 2.169 -10.574 93.174 1.00 73.28 C
ATOM 12 O2' U A 38 2.713 -10.124 94.403 1.00 73.46 O
ATOM 13 C1' U A 38 1.723 -9.392 92.315 1.00 73.29 C
ATOM 14 N1 U A 38 0.531 -9.710 91.436 1.00 73.33 N
ATOM 15 C2 U A 38 -0.748 -9.752 91.978 1.00 73.41 C
ATOM 16 O2 U A 38 -1.005 -9.541 93.153 1.00 73.58 O
ATOM 17 N3 U A 38 -1.749 -10.055 91.080 1.00 73.30 N
ATOM 18 C4 U A 38 -1.607 -10.317 89.725 1.00 73.18 C
ATOM 19 O4 U A 38 -2.594 -10.576 89.045 1.00 73.09 O
ATOM 20 C5 U A 38 -0.256 -10.258 89.230 1.00 73.19 C
ATOM 21 C6 U A 38 0.731 -9.966 90.087 1.00 73.34 C
ATOM 22 P U A 39 4.042 -13.662 92.603 1.00 73.75 P
ATOM 23 OP1 U A 39 5.126 -14.301 93.383 1.00 73.78 O
ATOM 24 OP2 U A 39 4.014 -13.832 91.132 1.00 73.28 O
ATOM 25 O5' U A 39 2.630 -14.130 93.202 1.00 73.71 O
TER
ATOM 1 O3' U B 38 4.081 -12.094 92.933 1.00 73.54 O
ATOM 2 P U B 39 4.042 -13.662 92.603 1.00 73.75 P
ATOM 3 OP1 U B 39 5.126 -14.301 93.383 1.00 73.78 O
ATOM 4 OP2 U B 39 4.014 -13.832 91.132 1.00 73.28 O
ATOM 5 O5' U B 39 2.630 -14.130 93.202 1.00 73.71 O
ATOM 6 C5' U B 39 2.395 -14.155 94.611 1.00 73.96 C
ATOM 7 C4' U B 39 0.917 -14.016 94.944 1.00 74.34 C
ATOM 8 O4' U B 39 0.280 -13.098 94.020 1.00 74.46 O
ATOM 9 C3' U B 39 0.096 -15.295 94.842 1.00 74.42 C
ATOM 10 O3' U B 39 0.150 -16.015 96.071 1.00 74.50 O
ATOM 11 C2' U B 39 -1.314 -14.781 94.555 1.00 74.40 C
ATOM 12 O2' U B 39 -2.052 -14.502 95.732 1.00 74.28 O
ATOM 13 C1' U B 39 -1.061 -13.491 93.772 1.00 74.22 C
ATOM 14 N1 U B 39 -1.293 -13.586 92.282 1.00 73.91 N
ATOM 15 C2 U B 39 -2.586 -13.643 91.778 1.00 73.70 C
ATOM 16 O2 U B 39 -3.591 -13.631 92.465 1.00 73.54 O
ATOM 17 N3 U B 39 -2.670 -13.722 90.408 1.00 73.61 N
ATOM 18 C4 U B 39 -1.625 -13.747 89.502 1.00 73.66 C
ATOM 19 O4 U B 39 -1.865 -13.818 88.302 1.00 73.66 O
ATOM 20 C5 U B 39 -0.311 -13.685 90.092 1.00 73.77 C
ATOM 21 C6 U B 39 -0.201 -13.607 91.427 1.00 73.90 C
ATOM 22 P U B 40 1.097 -17.298 96.227 1.00 74.84 P
ATOM 23 OP1 U B 40 2.142 -16.955 97.218 1.00 74.84 O
ATOM 24 OP2 U B 40 1.490 -17.770 94.876 1.00 74.87 O
ATOM 25 O5' U B 40 0.127 -18.375 96.905 1.00 73.98 O
TER
ATOM 2 P U A 38 4.379 -10.079 87.866 1.00 71.96 P
ATOM 3 OP1 U A 38 5.818 -10.400 87.714 1.00 71.87 O
ATOM 4 OP2 U A 38 3.409 -10.628 86.889 1.00 71.43 O
ATOM 5 O5' U A 38 3.927 -10.490 89.348 1.00 72.11 O
ATOM 6 C5' U A 38 4.744 -10.162 90.475 1.00 72.65 C
ATOM 7 C4' U A 38 3.927 -9.975 91.743 1.00 73.07 C
ATOM 8 O4' U A 38 2.849 -9.025 91.528 1.00 73.28 O
ATOM 9 C3' U A 38 3.201 -11.211 92.251 1.00 73.25 C
ATOM 10 O3' U A 38 4.081 -12.094 92.933 1.00 73.54 O
ATOM 11 C2' U A 38 2.169 -10.574 93.174 1.00 73.28 C
ATOM 12 O2' U A 38 2.713 -10.124 94.403 1.00 73.46 O
ATOM 13 C1' U A 38 1.723 -9.392 92.315 1.00 73.29 C
ATOM 14 N1 U A 38 0.531 -9.710 91.436 1.00 73.33 N
ATOM 15 C2 U A 38 -0.748 -9.752 91.978 1.00 73.41 C
ATOM 16 O2 U A 38 -1.005 -9.541 93.153 1.00 73.58 O
ATOM 17 N3 U A 38 -1.749 -10.055 91.080 1.00 73.30 N
ATOM 18 C4 U A 38 -1.607 -10.317 89.725 1.00 73.18 C
ATOM 19 O4 U A 38 -2.594 -10.576 89.045 1.00 73.09 O
ATOM 20 C5 U A 38 -0.256 -10.258 89.230 1.00 73.19 C
ATOM 21 C6 U A 38 0.731 -9.966 90.087 1.00 73.34 C
ATOM 22 P U A 39 4.042 -13.662 92.603 1.00 73.75 P
ATOM 23 OP1 U A 39 5.126 -14.301 93.383 1.00 73.78 O
ATOM 24 OP2 U A 39 4.014 -13.832 91.132 1.00 73.28 O
ATOM 25 O5' U A 39 2.630 -14.130 93.202 1.00 73.71 O
TER
ATOM 1 O3' U B 38 4.081 -12.094 92.933 1.00 73.54 O
ATOM 2 P U B 39 4.042 -13.662 92.603 1.00 73.75 P
ATOM 3 OP1 U B 39 5.126 -14.301 93.383 1.00 73.78 O
ATOM 4 OP2 U B 39 4.014 -13.832 91.132 1.00 73.28 O
ATOM 5 O5' U B 39 2.630 -14.130 93.202 1.00 73.71 O
ATOM 6 C5' U B 39 2.395 -14.155 94.611 1.00 73.96 C
ATOM 7 C4' U B 39 0.917 -14.016 94.944 1.00 74.34 C
ATOM 8 O4' U B 39 0.280 -13.098 94.020 1.00 74.46 O
ATOM 9 C3' U B 39 0.096 -15.295 94.842 1.00 74.42 C
ATOM 10 O3' U B 39 0.150 -16.015 96.071 1.00 74.50 O
ATOM 11 C2' U B 39 -1.314 -14.781 94.555 1.00 74.40 C
ATOM 12 O2' U B 39 -2.052 -14.502 95.732 1.00 74.28 O
ATOM 13 C1' U B 39 -1.061 -13.491 93.772 1.00 74.22 C
ATOM 14 N1 U B 39 -1.293 -13.586 92.282 1.00 73.91 N
ATOM 15 C2 U B 39 -2.586 -13.643 91.778 1.00 73.70 C
ATOM 16 O2 U B 39 -3.591 -13.631 92.465 1.00 73.54 O
ATOM 17 N3 U B 39 -2.670 -13.722 90.408 1.00 73.61 N
ATOM 18 C4 U B 39 -1.625 -13.747 89.502 1.00 73.66 C
ATOM 19 O4 U B 39 -1.865 -13.818 88.302 1.00 73.66 O
ATOM 20 C5 U B 39 -0.311 -13.685 90.092 1.00 73.77 C
ATOM 21 C6 U B 39 -0.201 -13.607 91.427 1.00 73.90 C
ATOM 22 P U B 40 1.097 -17.298 96.227 1.00 74.84 P
ATOM 23 OP1 U B 40 2.142 -16.955 97.218 1.00 74.84 O
ATOM 24 OP2 U B 40 1.490 -17.770 94.876 1.00 74.87 O
ATOM 25 O5' U B 40 0.127 -18.375 96.905 1.00 73.98 O
TER
Atoms:
C4: (-1.607,-10.317,89.725)
N3: (-1.749,-10.055,91.080)
OP1: (5.818,-10.400,87.714)
OP2: (3.409,-10.628,86.889)
C2: (-0.748,-9.752,91.978)
C1': (1.723,-9.392,92.315)
C3': (3.201,-11.211,92.251)
O5': (3.927,-10.490,89.348)
O4': (2.849,-9.025,91.528)
C5': (4.744,-10.162,90.475)
P: (4.379,-10.079,87.866)
C4': (3.927,-9.975,91.743)
C2': (2.169,-10.574,93.174)
O2': (2.713,-10.124,94.403)
N1: (0.531,-9.710,91.436)
O4: (-2.594,-10.576,89.045)
O2: (-1.005,-9.541,93.153)
C6: (0.731,-9.966,90.087)
C5: (-0.256,-10.258,89.230)
O3': (4.081,-12.094,92.933)
N3: (-1.749,-10.055,91.080)
OP1: (5.818,-10.400,87.714)
OP2: (3.409,-10.628,86.889)
C2: (-0.748,-9.752,91.978)
C1': (1.723,-9.392,92.315)
C3': (3.201,-11.211,92.251)
O5': (3.927,-10.490,89.348)
O4': (2.849,-9.025,91.528)
C5': (4.744,-10.162,90.475)
P: (4.379,-10.079,87.866)
C4': (3.927,-9.975,91.743)
C2': (2.169,-10.574,93.174)
O2': (2.713,-10.124,94.403)
N1: (0.531,-9.710,91.436)
O4: (-2.594,-10.576,89.045)
O2: (-1.005,-9.541,93.153)
C6: (0.731,-9.966,90.087)
C5: (-0.256,-10.258,89.230)
O3': (4.081,-12.094,92.933)
C4: (-1.625,-13.747,89.502)
N3: (-2.670,-13.722,90.408)
OP1: (5.126,-14.301,93.383)
OP2: (4.014,-13.832,91.132)
C2: (-2.586,-13.643,91.778)
C1': (-1.061,-13.491,93.772)
C3': (0.096,-15.295,94.842)
O5': (2.630,-14.130,93.202)
O4': (0.280,-13.098,94.020)
C5': (2.395,-14.155,94.611)
P: (4.042,-13.662,92.603)
C4': (0.917,-14.016,94.944)
C2': (-1.314,-14.781,94.555)
O2': (-2.052,-14.502,95.732)
N1: (-1.293,-13.586,92.282)
O4: (-1.865,-13.818,88.302)
O2: (-3.591,-13.631,92.465)
C6: (-0.201,-13.607,91.427)
C5: (-0.311,-13.685,90.092)
O3': (0.150,-16.015,96.071)
N3: (-2.670,-13.722,90.408)
OP1: (5.126,-14.301,93.383)
OP2: (4.014,-13.832,91.132)
C2: (-2.586,-13.643,91.778)
C1': (-1.061,-13.491,93.772)
C3': (0.096,-15.295,94.842)
O5': (2.630,-14.130,93.202)
O4': (0.280,-13.098,94.020)
C5': (2.395,-14.155,94.611)
P: (4.042,-13.662,92.603)
C4': (0.917,-14.016,94.944)
C2': (-1.314,-14.781,94.555)
O2': (-2.052,-14.502,95.732)
N1: (-1.293,-13.586,92.282)
O4: (-1.865,-13.818,88.302)
O2: (-3.591,-13.631,92.465)
C6: (-0.201,-13.607,91.427)
C5: (-0.311,-13.685,90.092)
O3': (0.150,-16.015,96.071)
Image (generated by PyMOL):