ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:02048:02377

Extra

PDB:
ATOM 1 O3' A A2047 60.830 121.410 85.317 1.00 52.54 O
ATOM 2 P G A2048 61.999 122.070 86.185 1.00 53.68 P
ATOM 3 OP1 G A2048 61.431 123.238 86.927 1.00 55.10 O
ATOM 4 OP2 G A2048 63.166 122.271 85.291 1.00 56.17 O
ATOM 5 O5' G A2048 62.347 120.913 87.221 1.00 53.56 O
ATOM 6 C5' G A2048 62.638 121.192 88.592 1.00 48.94 C
ATOM 7 C4' G A2048 64.108 120.981 88.855 1.00 49.44 C
ATOM 8 O4' G A2048 64.308 120.936 90.297 1.00 50.08 O
ATOM 9 C3' G A2048 64.703 119.678 88.314 1.00 47.86 C
ATOM 10 O3' G A2048 66.086 119.882 88.069 1.00 48.79 O
ATOM 11 C2' G A2048 64.594 118.747 89.514 1.00 47.20 C
ATOM 12 O2' G A2048 65.515 117.674 89.482 1.00 46.13 O
ATOM 13 C1' G A2048 64.923 119.715 90.646 1.00 47.05 C
ATOM 14 N9 G A2048 64.435 119.290 91.951 1.00 46.22 N
ATOM 15 C8 G A2048 63.133 119.067 92.337 1.00 46.42 C
ATOM 16 N7 G A2048 63.035 118.622 93.560 1.00 46.69 N
ATOM 17 C5 G A2048 64.348 118.567 94.013 1.00 45.09 C
ATOM 18 C6 G A2048 64.875 118.142 95.258 1.00 45.57 C
ATOM 19 O6 G A2048 64.268 117.718 96.246 1.00 47.69 O
ATOM 20 N1 G A2048 66.265 118.244 95.290 1.00 46.00 N
ATOM 21 C2 G A2048 67.047 118.700 94.256 1.00 44.21 C
ATOM 22 N2 G A2048 68.365 118.733 94.477 1.00 41.25 N
ATOM 23 N3 G A2048 66.567 119.094 93.088 1.00 43.95 N
ATOM 24 C4 G A2048 65.220 118.997 93.036 1.00 45.35 C
ATOM 25 P A A2049 66.669 119.820 86.578 1.00 47.97 P
ATOM 26 OP1 A A2049 65.771 120.604 85.703 1.00 52.40 O
ATOM 27 OP2 A A2049 66.999 118.411 86.226 1.00 46.26 O
ATOM 28 O5' A A2049 68.028 120.637 86.727 1.00 49.69 O
TER

ATOM 1 O3' U B2376 56.029 115.931 94.509 1.00 45.73 O
ATOM 2 P C B2377 56.327 115.324 93.050 1.00 42.72 P
ATOM 3 OP1 C B2377 55.600 116.222 92.127 1.00 42.92 O
ATOM 4 OP2 C B2377 56.053 113.868 93.031 1.00 43.44 O
ATOM 5 O5' C B2377 57.890 115.538 92.830 1.00 44.24 O
ATOM 6 C5' C B2377 58.503 116.834 93.004 1.00 40.60 C
ATOM 7 C4' C B2377 59.921 116.802 92.495 1.00 40.79 C
ATOM 8 O4' C B2377 60.604 115.690 93.095 1.00 39.97 O
ATOM 9 C3' C B2377 60.114 116.590 90.993 1.00 40.65 C
ATOM 10 O3' C B2377 60.397 117.821 90.326 1.00 43.77 O
ATOM 11 C2' C B2377 61.265 115.575 90.883 1.00 39.61 C
ATOM 12 O2' C B2377 62.324 116.022 90.066 1.00 37.81 O
ATOM 13 C1' C B2377 61.744 115.434 92.329 1.00 38.68 C
ATOM 14 N1 C B2377 62.242 114.090 92.687 1.00 39.06 N
ATOM 15 C2 C B2377 63.390 113.992 93.482 1.00 38.36 C
ATOM 16 O2 C B2377 63.957 115.028 93.846 1.00 38.84 O
ATOM 17 N3 C B2377 63.852 112.770 93.829 1.00 39.69 N
ATOM 18 C4 C B2377 63.224 111.670 93.405 1.00 38.87 C
ATOM 19 N4 C B2377 63.726 110.485 93.771 1.00 35.19 N
ATOM 20 C5 C B2377 62.054 111.737 92.586 1.00 38.03 C
ATOM 21 C6 C B2377 61.601 112.954 92.258 1.00 37.74 C
ATOM 22 P G B2378 59.684 118.158 88.921 1.00 43.33 P
ATOM 23 OP1 G B2378 58.675 117.106 88.649 1.00 44.36 O
ATOM 24 OP2 G B2378 60.734 118.442 87.913 1.00 43.01 O
ATOM 25 O5' G B2378 58.880 119.498 89.222 1.00 42.83 O
TER

Atoms:
OP1: (61.431,123.238,86.927)
OP2: (63.166,122.271,85.291)
C3': (64.703,119.678,88.314)
C1': (64.923,119.715,90.646)
C5': (62.638,121.192,88.592)
O6: (64.268,117.718,96.246)
O4': (64.308,120.936,90.297)
C8: (63.133,119.067,92.337)
C2: (67.047,118.700,94.256)
C6: (64.875,118.142,95.258)
C5: (64.348,118.567,94.013)
C4: (65.220,118.997,93.036)
P: (61.999,122.070,86.185)
C4': (64.108,120.981,88.855)
C2': (64.594,118.747,89.514)
O2': (65.515,117.674,89.482)
N1: (66.265,118.244,95.290)
N2: (68.365,118.733,94.477)
N3: (66.567,119.094,93.088)
N7: (63.035,118.622,93.560)
N9: (64.435,119.290,91.951)
O5': (62.347,120.913,87.221)
O3': (66.086,119.882,88.069)
C2: (63.390,113.992,93.482)
OP1: (55.600,116.222,92.127)
OP2: (56.053,113.868,93.031)
C4: (63.224,111.670,93.405)
O5': (57.890,115.538,92.830)
C3': (60.114,116.590,90.993)
C1': (61.744,115.434,92.329)
O4': (60.604,115.690,93.095)
C5': (58.503,116.834,93.004)
P: (56.327,115.324,93.050)
O2: (63.957,115.028,93.846)
C4': (59.921,116.802,92.495)
C2': (61.265,115.575,90.883)
O2': (62.324,116.022,90.066)
N1: (62.242,114.090,92.687)
N3: (63.852,112.770,93.829)
N4: (63.726,110.485,93.771)
C6: (61.601,112.954,92.258)
C5: (62.054,111.737,92.586)
O3': (60.397,117.821,90.326)
Image (generated by PyMOL):
PyMOL image
show in jmol