ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:02048:02377

Extra

PDB:
ATOM 1 O3' A A2047 61.055 121.741 85.405 1.00 69.80 O
ATOM 2 P G A2048 62.347 122.289 86.180 1.00 74.01 P
ATOM 3 OP1 G A2048 61.918 123.460 86.998 1.00 74.66 O
ATOM 4 OP2 G A2048 63.444 122.444 85.191 1.00 75.35 O
ATOM 5 O5' G A2048 62.728 121.088 87.151 1.00 78.20 O
ATOM 6 C5' G A2048 62.899 121.291 88.563 1.00 79.82 C
ATOM 7 C4' G A2048 64.364 121.237 88.918 1.00 82.07 C
ATOM 8 O4' G A2048 64.481 121.196 90.369 1.00 82.14 O
ATOM 9 C3' G A2048 65.104 120.002 88.404 1.00 83.34 C
ATOM 10 O3' G A2048 66.479 120.331 88.183 1.00 86.50 O
ATOM 11 C2' G A2048 64.972 119.040 89.580 1.00 82.24 C
ATOM 12 O2' G A2048 65.941 118.009 89.593 1.00 80.67 O
ATOM 13 C1' G A2048 65.129 120.002 90.759 1.00 81.45 C
ATOM 14 N9 G A2048 64.523 119.526 91.999 1.00 80.22 N
ATOM 15 C8 G A2048 63.190 119.279 92.234 1.00 79.84 C
ATOM 16 N7 G A2048 62.963 118.794 93.424 1.00 79.51 N
ATOM 17 C5 G A2048 64.219 118.730 94.017 1.00 79.18 C
ATOM 18 C6 G A2048 64.610 118.261 95.301 1.00 78.75 C
ATOM 19 O6 G A2048 63.903 117.784 96.194 1.00 79.70 O
ATOM 20 N1 G A2048 65.984 118.379 95.496 1.00 78.51 N
ATOM 21 C2 G A2048 66.871 118.877 94.577 1.00 77.91 C
ATOM 22 N2 G A2048 68.157 118.909 94.956 1.00 76.28 N
ATOM 23 N3 G A2048 66.524 119.311 93.372 1.00 78.54 N
ATOM 24 C4 G A2048 65.190 119.203 93.160 1.00 79.61 C
ATOM 25 P A A2049 67.149 120.095 86.736 1.00 88.11 P
ATOM 26 OP1 A A2049 66.977 121.351 85.959 1.00 89.37 O
ATOM 27 OP2 A A2049 66.652 118.809 86.172 1.00 86.82 O
ATOM 28 O5' A A2049 68.698 119.907 87.080 1.00 89.81 O
TER

ATOM 1 O3' U B2376 56.225 116.161 94.722 1.00 45.27 O
ATOM 2 P C B2377 56.538 115.571 93.259 1.00 45.48 P
ATOM 3 OP1 C B2377 55.811 116.438 92.297 1.00 47.31 O
ATOM 4 OP2 C B2377 56.303 114.109 93.246 1.00 46.87 O
ATOM 5 O5' C B2377 58.101 115.796 93.052 1.00 46.76 O
ATOM 6 C5' C B2377 58.701 117.094 93.171 1.00 47.14 C
ATOM 7 C4' C B2377 60.103 117.064 92.606 1.00 47.45 C
ATOM 8 O4' C B2377 60.814 115.954 93.183 1.00 46.31 O
ATOM 9 C3' C B2377 60.235 116.862 91.095 1.00 47.44 C
ATOM 10 O3' C B2377 60.551 118.097 90.448 1.00 51.86 O
ATOM 11 C2' C B2377 61.338 115.800 90.931 1.00 47.01 C
ATOM 12 O2' C B2377 62.375 116.219 90.063 1.00 47.31 O
ATOM 13 C1' C B2377 61.896 115.652 92.348 1.00 44.59 C
ATOM 14 N1 C B2377 62.370 114.293 92.693 1.00 44.11 N
ATOM 15 C2 C B2377 63.583 114.160 93.378 1.00 43.31 C
ATOM 16 O2 C B2377 64.238 115.174 93.642 1.00 45.28 O
ATOM 17 N3 C B2377 64.009 112.929 93.739 1.00 43.54 N
ATOM 18 C4 C B2377 63.277 111.854 93.441 1.00 41.84 C
ATOM 19 N4 C B2377 63.729 110.667 93.842 1.00 39.14 N
ATOM 20 C5 C B2377 62.049 111.953 92.723 1.00 42.26 C
ATOM 21 C6 C B2377 61.638 113.180 92.370 1.00 41.94 C
ATOM 22 P G B2378 59.827 118.493 89.057 1.00 52.99 P
ATOM 23 OP1 G B2378 58.665 117.597 88.851 1.00 51.53 O
ATOM 24 OP2 G B2378 60.872 118.590 88.001 1.00 52.94 O
ATOM 25 O5' G B2378 59.238 119.941 89.359 1.00 52.11 O
TER

Atoms:
OP1: (61.918,123.460,86.998)
OP2: (63.444,122.444,85.191)
C3': (65.104,120.002,88.404)
C1': (65.129,120.002,90.759)
C5': (62.899,121.291,88.563)
O6: (63.903,117.784,96.194)
O4': (64.481,121.196,90.369)
C8: (63.190,119.279,92.234)
C2: (66.871,118.877,94.577)
C6: (64.610,118.261,95.301)
C5: (64.219,118.730,94.017)
C4: (65.190,119.203,93.160)
P: (62.347,122.289,86.180)
C4': (64.364,121.237,88.918)
C2': (64.972,119.040,89.580)
O2': (65.941,118.009,89.593)
N1: (65.984,118.379,95.496)
N2: (68.157,118.909,94.956)
N3: (66.524,119.311,93.372)
N7: (62.963,118.794,93.424)
N9: (64.523,119.526,91.999)
O5': (62.728,121.088,87.151)
O3': (66.479,120.331,88.183)
C2: (63.583,114.160,93.378)
OP1: (55.811,116.438,92.297)
OP2: (56.303,114.109,93.246)
C4: (63.277,111.854,93.441)
O5': (58.101,115.796,93.052)
C3': (60.235,116.862,91.095)
C1': (61.896,115.652,92.348)
O4': (60.814,115.954,93.183)
C5': (58.701,117.094,93.171)
P: (56.538,115.571,93.259)
O2: (64.238,115.174,93.642)
C4': (60.103,117.064,92.606)
C2': (61.338,115.800,90.931)
O2': (62.375,116.219,90.063)
N1: (62.370,114.293,92.693)
N3: (64.009,112.929,93.739)
N4: (63.729,110.667,93.842)
C6: (61.638,113.180,92.370)
C5: (62.049,111.953,92.723)
O3': (60.551,118.097,90.448)
Image (generated by PyMOL):
PyMOL image
show in jmol