Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1WVD:B1:B2
Extra
PDB:
ATOM 1 P U A 1 41.092 19.593 27.401 1.00 52.13 P
ATOM 2 OP1 U A 1 41.900 20.344 28.412 1.00 51.13 O
ATOM 3 OP2 U A 1 41.765 18.969 26.228 1.00 52.55 O
ATOM 4 O5' U A 1 40.388 18.459 28.264 1.00 51.88 O
ATOM 5 C5' U A 1 40.254 18.619 29.681 1.00 51.43 C
ATOM 6 C4' U A 1 39.976 17.294 30.336 1.00 50.64 C
ATOM 7 O4' U A 1 38.849 16.665 29.673 1.00 50.15 O
ATOM 8 C3' U A 1 41.085 16.277 30.202 1.00 51.42 C
ATOM 9 O3' U A 1 42.076 16.469 31.206 1.00 52.54 O
ATOM 10 C2' U A 1 40.333 14.972 30.400 1.00 50.78 C
ATOM 11 O2' U A 1 40.039 14.804 31.769 1.00 51.68 O
ATOM 12 C1' U A 1 39.027 15.262 29.656 1.00 49.76 C
ATOM 13 N1 U A 1 38.955 14.805 28.258 1.00 47.96 N
ATOM 14 C2 U A 1 38.541 13.501 28.003 1.00 47.45 C
ATOM 15 O2 U A 1 38.274 12.699 28.882 1.00 47.02 O
ATOM 16 N3 U A 1 38.447 13.168 26.670 1.00 47.59 N
ATOM 17 C4 U A 1 38.723 13.980 25.581 1.00 48.51 C
ATOM 18 O4 U A 1 38.570 13.547 24.431 1.00 47.52 O
ATOM 19 C5 U A 1 39.166 15.298 25.932 1.00 49.26 C
ATOM 20 C6 U A 1 39.264 15.653 27.231 1.00 48.69 C
ATOM 21 P U A 2 43.598 16.018 30.915 1.00 52.87 P
ATOM 22 OP1 U A 2 44.448 16.383 32.081 1.00 52.77 O
ATOM 23 OP2 U A 2 43.940 16.514 29.553 1.00 52.06 O
ATOM 24 O5' U A 2 43.519 14.433 30.857 1.00 52.35 O
TER
ATOM 1 O3' U B 1 42.076 16.469 31.206 1.00 52.54 O
ATOM 2 P U B 2 43.598 16.018 30.915 1.00 52.87 P
ATOM 3 OP1 U B 2 44.448 16.383 32.081 1.00 52.77 O
ATOM 4 OP2 U B 2 43.940 16.514 29.553 1.00 52.06 O
ATOM 5 O5' U B 2 43.519 14.433 30.857 1.00 52.35 O
ATOM 6 C5' U B 2 43.139 13.690 32.019 1.00 51.88 C
ATOM 7 C4' U B 2 42.943 12.243 31.671 1.00 50.19 C
ATOM 8 O4' U B 2 41.756 12.087 30.857 1.00 49.42 O
ATOM 9 C3' U B 2 44.045 11.603 30.855 1.00 48.80 C
ATOM 10 O3' U B 2 45.103 11.206 31.715 1.00 48.41 O
ATOM 11 C2' U B 2 43.315 10.402 30.290 1.00 48.15 C
ATOM 12 O2' U B 2 43.144 9.453 31.318 1.00 49.10 O
ATOM 13 C1' U B 2 41.944 11.000 29.978 1.00 47.16 C
ATOM 14 N1 U B 2 41.814 11.501 28.610 1.00 45.30 N
ATOM 15 C2 U B 2 41.328 10.628 27.681 1.00 45.08 C
ATOM 16 O2 U B 2 40.995 9.499 27.960 1.00 43.96 O
ATOM 17 N3 U B 2 41.233 11.126 26.412 1.00 46.05 N
ATOM 18 C4 U B 2 41.552 12.401 25.999 1.00 46.50 C
ATOM 19 O4 U B 2 41.390 12.707 24.811 1.00 48.01 O
ATOM 20 C5 U B 2 42.037 13.259 27.038 1.00 44.56 C
ATOM 21 C6 U B 2 42.154 12.787 28.274 1.00 44.20 C
ATOM 22 P G B 3 46.586 10.969 31.121 1.00 49.41 P
ATOM 23 OP1 G B 3 47.409 10.500 32.280 1.00 48.18 O
ATOM 24 OP2 G B 3 47.013 12.170 30.362 1.00 48.39 O
ATOM 25 O5' G B 3 46.419 9.820 30.020 1.00 45.25 O
TER
ATOM 2 OP1 U A 1 41.900 20.344 28.412 1.00 51.13 O
ATOM 3 OP2 U A 1 41.765 18.969 26.228 1.00 52.55 O
ATOM 4 O5' U A 1 40.388 18.459 28.264 1.00 51.88 O
ATOM 5 C5' U A 1 40.254 18.619 29.681 1.00 51.43 C
ATOM 6 C4' U A 1 39.976 17.294 30.336 1.00 50.64 C
ATOM 7 O4' U A 1 38.849 16.665 29.673 1.00 50.15 O
ATOM 8 C3' U A 1 41.085 16.277 30.202 1.00 51.42 C
ATOM 9 O3' U A 1 42.076 16.469 31.206 1.00 52.54 O
ATOM 10 C2' U A 1 40.333 14.972 30.400 1.00 50.78 C
ATOM 11 O2' U A 1 40.039 14.804 31.769 1.00 51.68 O
ATOM 12 C1' U A 1 39.027 15.262 29.656 1.00 49.76 C
ATOM 13 N1 U A 1 38.955 14.805 28.258 1.00 47.96 N
ATOM 14 C2 U A 1 38.541 13.501 28.003 1.00 47.45 C
ATOM 15 O2 U A 1 38.274 12.699 28.882 1.00 47.02 O
ATOM 16 N3 U A 1 38.447 13.168 26.670 1.00 47.59 N
ATOM 17 C4 U A 1 38.723 13.980 25.581 1.00 48.51 C
ATOM 18 O4 U A 1 38.570 13.547 24.431 1.00 47.52 O
ATOM 19 C5 U A 1 39.166 15.298 25.932 1.00 49.26 C
ATOM 20 C6 U A 1 39.264 15.653 27.231 1.00 48.69 C
ATOM 21 P U A 2 43.598 16.018 30.915 1.00 52.87 P
ATOM 22 OP1 U A 2 44.448 16.383 32.081 1.00 52.77 O
ATOM 23 OP2 U A 2 43.940 16.514 29.553 1.00 52.06 O
ATOM 24 O5' U A 2 43.519 14.433 30.857 1.00 52.35 O
TER
ATOM 1 O3' U B 1 42.076 16.469 31.206 1.00 52.54 O
ATOM 2 P U B 2 43.598 16.018 30.915 1.00 52.87 P
ATOM 3 OP1 U B 2 44.448 16.383 32.081 1.00 52.77 O
ATOM 4 OP2 U B 2 43.940 16.514 29.553 1.00 52.06 O
ATOM 5 O5' U B 2 43.519 14.433 30.857 1.00 52.35 O
ATOM 6 C5' U B 2 43.139 13.690 32.019 1.00 51.88 C
ATOM 7 C4' U B 2 42.943 12.243 31.671 1.00 50.19 C
ATOM 8 O4' U B 2 41.756 12.087 30.857 1.00 49.42 O
ATOM 9 C3' U B 2 44.045 11.603 30.855 1.00 48.80 C
ATOM 10 O3' U B 2 45.103 11.206 31.715 1.00 48.41 O
ATOM 11 C2' U B 2 43.315 10.402 30.290 1.00 48.15 C
ATOM 12 O2' U B 2 43.144 9.453 31.318 1.00 49.10 O
ATOM 13 C1' U B 2 41.944 11.000 29.978 1.00 47.16 C
ATOM 14 N1 U B 2 41.814 11.501 28.610 1.00 45.30 N
ATOM 15 C2 U B 2 41.328 10.628 27.681 1.00 45.08 C
ATOM 16 O2 U B 2 40.995 9.499 27.960 1.00 43.96 O
ATOM 17 N3 U B 2 41.233 11.126 26.412 1.00 46.05 N
ATOM 18 C4 U B 2 41.552 12.401 25.999 1.00 46.50 C
ATOM 19 O4 U B 2 41.390 12.707 24.811 1.00 48.01 O
ATOM 20 C5 U B 2 42.037 13.259 27.038 1.00 44.56 C
ATOM 21 C6 U B 2 42.154 12.787 28.274 1.00 44.20 C
ATOM 22 P G B 3 46.586 10.969 31.121 1.00 49.41 P
ATOM 23 OP1 G B 3 47.409 10.500 32.280 1.00 48.18 O
ATOM 24 OP2 G B 3 47.013 12.170 30.362 1.00 48.39 O
ATOM 25 O5' G B 3 46.419 9.820 30.020 1.00 45.25 O
TER
Atoms:
C4: (38.723,13.980,25.581)
N3: (38.447,13.168,26.670)
OP1: (41.900,20.344,28.412)
OP2: (41.765,18.969,26.228)
C2: (38.541,13.501,28.003)
C1': (39.027,15.262,29.656)
C3': (41.085,16.277,30.202)
O5': (40.388,18.459,28.264)
O4': (38.849,16.665,29.673)
C5': (40.254,18.619,29.681)
P: (41.092,19.593,27.401)
C4': (39.976,17.294,30.336)
C2': (40.333,14.972,30.400)
O2': (40.039,14.804,31.769)
N1: (38.955,14.805,28.258)
O4: (38.570,13.547,24.431)
O2: (38.274,12.699,28.882)
C6: (39.264,15.653,27.231)
C5: (39.166,15.298,25.932)
O3': (42.076,16.469,31.206)
N3: (38.447,13.168,26.670)
OP1: (41.900,20.344,28.412)
OP2: (41.765,18.969,26.228)
C2: (38.541,13.501,28.003)
C1': (39.027,15.262,29.656)
C3': (41.085,16.277,30.202)
O5': (40.388,18.459,28.264)
O4': (38.849,16.665,29.673)
C5': (40.254,18.619,29.681)
P: (41.092,19.593,27.401)
C4': (39.976,17.294,30.336)
C2': (40.333,14.972,30.400)
O2': (40.039,14.804,31.769)
N1: (38.955,14.805,28.258)
O4: (38.570,13.547,24.431)
O2: (38.274,12.699,28.882)
C6: (39.264,15.653,27.231)
C5: (39.166,15.298,25.932)
O3': (42.076,16.469,31.206)
C4: (41.552,12.401,25.999)
N3: (41.233,11.126,26.412)
OP1: (44.448,16.383,32.081)
OP2: (43.940,16.514,29.553)
C2: (41.328,10.628,27.681)
C1': (41.944,11.000,29.978)
C3': (44.045,11.603,30.855)
O5': (43.519,14.433,30.857)
O4': (41.756,12.087,30.857)
C5': (43.139,13.690,32.019)
P: (43.598,16.018,30.915)
C4': (42.943,12.243,31.671)
C2': (43.315,10.402,30.290)
O2': (43.144,9.453,31.318)
N1: (41.814,11.501,28.610)
O4: (41.390,12.707,24.811)
O2: (40.995,9.499,27.960)
C6: (42.154,12.787,28.274)
C5: (42.037,13.259,27.038)
O3': (45.103,11.206,31.715)
N3: (41.233,11.126,26.412)
OP1: (44.448,16.383,32.081)
OP2: (43.940,16.514,29.553)
C2: (41.328,10.628,27.681)
C1': (41.944,11.000,29.978)
C3': (44.045,11.603,30.855)
O5': (43.519,14.433,30.857)
O4': (41.756,12.087,30.857)
C5': (43.139,13.690,32.019)
P: (43.598,16.018,30.915)
C4': (42.943,12.243,31.671)
C2': (43.315,10.402,30.290)
O2': (43.144,9.453,31.318)
N1: (41.814,11.501,28.610)
O4: (41.390,12.707,24.811)
O2: (40.995,9.499,27.960)
C6: (42.154,12.787,28.274)
C5: (42.037,13.259,27.038)
O3': (45.103,11.206,31.715)
Image (generated by PyMOL):