Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02018:02017
Extra
PDB:
ATOM 1 O3' C A2017 48.729 111.067 103.249 1.00 40.63 O
ATOM 2 P G A2018 47.876 111.574 104.515 1.00 43.16 P
ATOM 3 OP1 G A2018 47.164 110.422 105.139 1.00 43.11 O
ATOM 4 OP2 G A2018 47.114 112.783 104.118 1.00 43.31 O
ATOM 5 O5' G A2018 49.011 112.079 105.500 1.00 42.20 O
ATOM 6 C5' G A2018 48.926 111.884 106.911 1.00 41.28 C
ATOM 7 C4' G A2018 50.298 111.604 107.455 1.00 40.77 C
ATOM 8 O4' G A2018 50.576 110.183 107.369 1.00 41.49 O
ATOM 9 C3' G A2018 51.429 112.307 106.712 1.00 41.15 C
ATOM 10 O3' G A2018 52.431 112.706 107.630 1.00 42.00 O
ATOM 11 C2' G A2018 51.935 111.219 105.767 1.00 40.45 C
ATOM 12 O2' G A2018 53.284 111.381 105.378 1.00 40.58 O
ATOM 13 C1' G A2018 51.757 109.971 106.625 1.00 39.73 C
ATOM 14 N9 G A2018 51.597 108.729 105.871 1.00 39.74 N
ATOM 15 C8 G A2018 50.555 108.379 105.044 1.00 37.93 C
ATOM 16 N7 G A2018 50.685 107.184 104.533 1.00 36.72 N
ATOM 17 C5 G A2018 51.886 106.717 105.050 1.00 38.06 C
ATOM 18 C6 G A2018 52.545 105.475 104.871 1.00 38.03 C
ATOM 19 O6 G A2018 52.191 104.501 104.197 1.00 39.66 O
ATOM 20 N1 G A2018 53.735 105.421 105.587 1.00 38.87 N
ATOM 21 C2 G A2018 54.227 106.425 106.378 1.00 37.89 C
ATOM 22 N2 G A2018 55.387 106.177 106.992 1.00 36.83 N
ATOM 23 N3 G A2018 53.625 107.584 106.557 1.00 38.76 N
ATOM 24 C4 G A2018 52.466 107.662 105.870 1.00 39.07 C
ATOM 25 P G A2019 52.839 114.254 107.730 1.00 38.86 P
ATOM 26 OP1 G A2019 53.350 114.688 106.413 1.00 38.61 O
ATOM 27 OP2 G A2019 53.674 114.429 108.935 1.00 43.74 O
ATOM 28 O5' G A2019 51.474 115.016 108.027 1.00 40.08 O
TER
ATOM 1 O3' G B2016 43.859 108.487 103.870 1.00 31.74 O
ATOM 2 P C B2017 45.124 107.500 103.720 1.00 32.75 P
ATOM 3 OP1 C B2017 44.703 106.417 102.804 1.00 29.74 O
ATOM 4 OP2 C B2017 45.652 107.147 105.072 1.00 34.09 O
ATOM 5 O5' C B2017 46.220 108.396 102.991 1.00 31.79 O
ATOM 6 C5' C B2017 47.610 108.062 103.072 1.00 32.18 C
ATOM 7 C4' C B2017 48.422 108.945 102.153 1.00 35.71 C
ATOM 8 O4' C B2017 48.212 108.586 100.772 1.00 36.28 O
ATOM 9 C3' C B2017 48.086 110.427 102.149 1.00 37.00 C
ATOM 10 O3' C B2017 48.729 111.067 103.249 1.00 40.63 O
ATOM 11 C2' C B2017 48.758 110.901 100.858 1.00 36.92 C
ATOM 12 O2' C B2017 50.121 111.201 101.071 1.00 38.90 O
ATOM 13 C1' C B2017 48.694 109.646 99.976 1.00 36.92 C
ATOM 14 N1 C B2017 47.939 109.707 98.710 1.00 36.99 N
ATOM 15 C2 C B2017 48.636 109.493 97.509 1.00 37.79 C
ATOM 16 O2 C B2017 49.859 109.310 97.551 1.00 37.90 O
ATOM 17 N3 C B2017 47.958 109.495 96.335 1.00 36.74 N
ATOM 18 C4 C B2017 46.642 109.713 96.330 1.00 36.30 C
ATOM 19 N4 C B2017 46.009 109.689 95.155 1.00 35.27 N
ATOM 20 C5 C B2017 45.913 109.961 97.533 1.00 35.43 C
ATOM 21 C6 C B2017 46.594 109.949 98.689 1.00 36.08 C
ATOM 22 P G B2018 47.876 111.574 104.515 1.00 43.16 P
ATOM 23 OP1 G B2018 47.164 110.422 105.139 1.00 43.11 O
ATOM 24 OP2 G B2018 47.114 112.783 104.118 1.00 43.31 O
ATOM 25 O5' G B2018 49.011 112.079 105.500 1.00 42.20 O
TER
ATOM 2 P G A2018 47.876 111.574 104.515 1.00 43.16 P
ATOM 3 OP1 G A2018 47.164 110.422 105.139 1.00 43.11 O
ATOM 4 OP2 G A2018 47.114 112.783 104.118 1.00 43.31 O
ATOM 5 O5' G A2018 49.011 112.079 105.500 1.00 42.20 O
ATOM 6 C5' G A2018 48.926 111.884 106.911 1.00 41.28 C
ATOM 7 C4' G A2018 50.298 111.604 107.455 1.00 40.77 C
ATOM 8 O4' G A2018 50.576 110.183 107.369 1.00 41.49 O
ATOM 9 C3' G A2018 51.429 112.307 106.712 1.00 41.15 C
ATOM 10 O3' G A2018 52.431 112.706 107.630 1.00 42.00 O
ATOM 11 C2' G A2018 51.935 111.219 105.767 1.00 40.45 C
ATOM 12 O2' G A2018 53.284 111.381 105.378 1.00 40.58 O
ATOM 13 C1' G A2018 51.757 109.971 106.625 1.00 39.73 C
ATOM 14 N9 G A2018 51.597 108.729 105.871 1.00 39.74 N
ATOM 15 C8 G A2018 50.555 108.379 105.044 1.00 37.93 C
ATOM 16 N7 G A2018 50.685 107.184 104.533 1.00 36.72 N
ATOM 17 C5 G A2018 51.886 106.717 105.050 1.00 38.06 C
ATOM 18 C6 G A2018 52.545 105.475 104.871 1.00 38.03 C
ATOM 19 O6 G A2018 52.191 104.501 104.197 1.00 39.66 O
ATOM 20 N1 G A2018 53.735 105.421 105.587 1.00 38.87 N
ATOM 21 C2 G A2018 54.227 106.425 106.378 1.00 37.89 C
ATOM 22 N2 G A2018 55.387 106.177 106.992 1.00 36.83 N
ATOM 23 N3 G A2018 53.625 107.584 106.557 1.00 38.76 N
ATOM 24 C4 G A2018 52.466 107.662 105.870 1.00 39.07 C
ATOM 25 P G A2019 52.839 114.254 107.730 1.00 38.86 P
ATOM 26 OP1 G A2019 53.350 114.688 106.413 1.00 38.61 O
ATOM 27 OP2 G A2019 53.674 114.429 108.935 1.00 43.74 O
ATOM 28 O5' G A2019 51.474 115.016 108.027 1.00 40.08 O
TER
ATOM 1 O3' G B2016 43.859 108.487 103.870 1.00 31.74 O
ATOM 2 P C B2017 45.124 107.500 103.720 1.00 32.75 P
ATOM 3 OP1 C B2017 44.703 106.417 102.804 1.00 29.74 O
ATOM 4 OP2 C B2017 45.652 107.147 105.072 1.00 34.09 O
ATOM 5 O5' C B2017 46.220 108.396 102.991 1.00 31.79 O
ATOM 6 C5' C B2017 47.610 108.062 103.072 1.00 32.18 C
ATOM 7 C4' C B2017 48.422 108.945 102.153 1.00 35.71 C
ATOM 8 O4' C B2017 48.212 108.586 100.772 1.00 36.28 O
ATOM 9 C3' C B2017 48.086 110.427 102.149 1.00 37.00 C
ATOM 10 O3' C B2017 48.729 111.067 103.249 1.00 40.63 O
ATOM 11 C2' C B2017 48.758 110.901 100.858 1.00 36.92 C
ATOM 12 O2' C B2017 50.121 111.201 101.071 1.00 38.90 O
ATOM 13 C1' C B2017 48.694 109.646 99.976 1.00 36.92 C
ATOM 14 N1 C B2017 47.939 109.707 98.710 1.00 36.99 N
ATOM 15 C2 C B2017 48.636 109.493 97.509 1.00 37.79 C
ATOM 16 O2 C B2017 49.859 109.310 97.551 1.00 37.90 O
ATOM 17 N3 C B2017 47.958 109.495 96.335 1.00 36.74 N
ATOM 18 C4 C B2017 46.642 109.713 96.330 1.00 36.30 C
ATOM 19 N4 C B2017 46.009 109.689 95.155 1.00 35.27 N
ATOM 20 C5 C B2017 45.913 109.961 97.533 1.00 35.43 C
ATOM 21 C6 C B2017 46.594 109.949 98.689 1.00 36.08 C
ATOM 22 P G B2018 47.876 111.574 104.515 1.00 43.16 P
ATOM 23 OP1 G B2018 47.164 110.422 105.139 1.00 43.11 O
ATOM 24 OP2 G B2018 47.114 112.783 104.118 1.00 43.31 O
ATOM 25 O5' G B2018 49.011 112.079 105.500 1.00 42.20 O
TER
Atoms:
OP1: (47.164,110.422,105.139)
OP2: (47.114,112.783,104.118)
C3': (51.429,112.307,106.712)
C1': (51.757,109.971,106.625)
C5': (48.926,111.884,106.911)
O6: (52.191,104.501,104.197)
O4': (50.576,110.183,107.369)
C8: (50.555,108.379,105.044)
C2: (54.227,106.425,106.378)
C6: (52.545,105.475,104.871)
C5: (51.886,106.717,105.050)
C4: (52.466,107.662,105.870)
P: (47.876,111.574,104.515)
C4': (50.298,111.604,107.455)
C2': (51.935,111.219,105.767)
O2': (53.284,111.381,105.378)
N1: (53.735,105.421,105.587)
N2: (55.387,106.177,106.992)
N3: (53.625,107.584,106.557)
N7: (50.685,107.184,104.533)
N9: (51.597,108.729,105.871)
O5': (49.011,112.079,105.500)
O3': (52.431,112.706,107.630)
OP2: (47.114,112.783,104.118)
C3': (51.429,112.307,106.712)
C1': (51.757,109.971,106.625)
C5': (48.926,111.884,106.911)
O6: (52.191,104.501,104.197)
O4': (50.576,110.183,107.369)
C8: (50.555,108.379,105.044)
C2: (54.227,106.425,106.378)
C6: (52.545,105.475,104.871)
C5: (51.886,106.717,105.050)
C4: (52.466,107.662,105.870)
P: (47.876,111.574,104.515)
C4': (50.298,111.604,107.455)
C2': (51.935,111.219,105.767)
O2': (53.284,111.381,105.378)
N1: (53.735,105.421,105.587)
N2: (55.387,106.177,106.992)
N3: (53.625,107.584,106.557)
N7: (50.685,107.184,104.533)
N9: (51.597,108.729,105.871)
O5': (49.011,112.079,105.500)
O3': (52.431,112.706,107.630)
C2: (48.636,109.493,97.509)
OP1: (44.703,106.417,102.804)
OP2: (45.652,107.147,105.072)
C4: (46.642,109.713,96.330)
O5': (46.220,108.396,102.991)
C3': (48.086,110.427,102.149)
C1': (48.694,109.646,99.976)
O4': (48.212,108.586,100.772)
C5': (47.610,108.062,103.072)
P: (45.124,107.500,103.720)
O2: (49.859,109.310,97.551)
C4': (48.422,108.945,102.153)
C2': (48.758,110.901,100.858)
O2': (50.121,111.201,101.071)
N1: (47.939,109.707,98.710)
N3: (47.958,109.495,96.335)
N4: (46.009,109.689,95.155)
C6: (46.594,109.949,98.689)
C5: (45.913,109.961,97.533)
O3': (48.729,111.067,103.249)
OP1: (44.703,106.417,102.804)
OP2: (45.652,107.147,105.072)
C4: (46.642,109.713,96.330)
O5': (46.220,108.396,102.991)
C3': (48.086,110.427,102.149)
C1': (48.694,109.646,99.976)
O4': (48.212,108.586,100.772)
C5': (47.610,108.062,103.072)
P: (45.124,107.500,103.720)
O2: (49.859,109.310,97.551)
C4': (48.422,108.945,102.153)
C2': (48.758,110.901,100.858)
O2': (50.121,111.201,101.071)
N1: (47.939,109.707,98.710)
N3: (47.958,109.495,96.335)
N4: (46.009,109.689,95.155)
C6: (46.594,109.949,98.689)
C5: (45.913,109.961,97.533)
O3': (48.729,111.067,103.249)
Image (generated by PyMOL):