Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KFU:N58:N55
Extra
PDB:
ATOM 1 O3' U A 57 -17.992 -23.258 62.246 1.00 73.83 O
ATOM 2 P C A 58 -18.172 -21.772 61.669 1.00115.66 P
ATOM 3 OP1 C A 58 -18.731 -21.897 60.303 1.00214.37 O
ATOM 4 OP2 C A 58 -16.876 -21.073 61.849 1.00182.97 O
ATOM 5 O5' C A 58 -19.262 -21.149 62.648 1.00181.34 O
ATOM 6 C5' C A 58 -20.655 -21.327 62.409 1.00166.14 C
ATOM 7 C4' C A 58 -21.463 -20.219 63.034 1.00130.55 C
ATOM 8 O4' C A 58 -21.806 -20.589 64.400 1.00143.95 O
ATOM 9 C3' C A 58 -20.740 -18.877 63.125 1.00134.30 C
ATOM 10 O3' C A 58 -21.672 -17.812 62.965 1.00145.56 O
ATOM 11 C2' C A 58 -20.211 -18.878 64.553 1.00167.59 C
ATOM 12 O2' C A 58 -19.967 -17.597 65.091 1.00293.20 O
ATOM 13 C1' C A 58 -21.332 -19.599 65.293 1.00172.57 C
ATOM 14 N1 C A 58 -20.891 -20.261 66.540 1.00127.43 N
ATOM 15 C2 C A 58 -21.560 -19.979 67.735 1.00127.43 C
ATOM 16 O2 C A 58 -22.522 -19.197 67.716 1.00127.43 O
ATOM 17 N3 C A 58 -21.146 -20.572 68.878 1.00127.43 N
ATOM 18 C4 C A 58 -20.106 -21.407 68.858 1.00127.43 C
ATOM 19 N4 C A 58 -19.731 -21.970 70.009 1.00127.43 N
ATOM 20 C5 C A 58 -19.401 -21.705 67.659 1.00127.43 C
ATOM 21 C6 C A 58 -19.821 -21.112 66.536 1.00127.43 C
ATOM 22 P C A 59 -21.145 -16.338 62.606 1.00163.09 P
ATOM 23 OP1 C A 59 -22.224 -15.661 61.847 1.00207.79 O
ATOM 24 OP2 C A 59 -19.814 -16.495 61.969 1.00102.08 O
ATOM 25 O5' C A 59 -20.982 -15.661 64.037 1.00156.03 O
TER
ATOM 1 O3' G B 54 -21.756 -27.936 74.862 1.00126.69 O
ATOM 2 P A B 55 -20.907 -26.636 74.457 1.00 89.36 P
ATOM 3 OP1 A B 55 -19.592 -26.741 75.137 1.00117.37 O
ATOM 4 OP2 A B 55 -21.759 -25.453 74.734 1.00147.10 O
ATOM 5 O5' A B 55 -20.720 -26.813 72.887 1.00 78.95 O
ATOM 6 C5' A B 55 -19.951 -27.888 72.357 1.00117.07 C
ATOM 7 C4' A B 55 -19.103 -27.442 71.192 1.00 81.04 C
ATOM 8 O4' A B 55 -19.955 -26.797 70.208 1.00 80.37 O
ATOM 9 C3' A B 55 -18.009 -26.434 71.535 1.00 57.94 C
ATOM 10 O3' A B 55 -16.883 -26.643 70.681 1.00104.59 O
ATOM 11 C2' A B 55 -18.668 -25.098 71.204 1.00 52.57 C
ATOM 12 O2' A B 55 -17.765 -24.053 70.911 1.00188.51 O
ATOM 13 C1' A B 55 -19.526 -25.464 69.995 1.00 65.52 C
ATOM 14 N9 A B 55 -20.718 -24.628 69.844 1.00115.47 N
ATOM 15 C8 A B 55 -21.452 -24.046 70.846 1.00116.74 C
ATOM 16 N7 A B 55 -22.473 -23.348 70.418 1.00 93.68 N
ATOM 17 C5 A B 55 -22.412 -23.482 69.039 1.00 95.61 C
ATOM 18 C6 A B 55 -23.219 -22.975 68.007 1.00 92.14 C
ATOM 19 N6 A B 55 -24.288 -22.203 68.216 1.00119.18 N
ATOM 20 N1 A B 55 -22.885 -23.293 66.736 1.00 93.28 N
ATOM 21 C2 A B 55 -21.812 -24.069 66.533 1.00111.14 C
ATOM 22 N3 A B 55 -20.976 -24.604 67.420 1.00103.23 N
ATOM 23 C4 A B 55 -21.335 -24.268 68.670 1.00110.40 C
ATOM 24 P G B 56 -15.808 -27.788 71.027 1.00 94.19 P
ATOM 25 OP1 G B 56 -16.518 -29.087 70.971 1.00110.30 O
ATOM 26 OP2 G B 56 -15.140 -27.395 72.290 1.00 76.37 O
ATOM 27 O5' G B 56 -14.781 -27.683 69.819 1.00 93.49 O
TER
ATOM 2 P C A 58 -18.172 -21.772 61.669 1.00115.66 P
ATOM 3 OP1 C A 58 -18.731 -21.897 60.303 1.00214.37 O
ATOM 4 OP2 C A 58 -16.876 -21.073 61.849 1.00182.97 O
ATOM 5 O5' C A 58 -19.262 -21.149 62.648 1.00181.34 O
ATOM 6 C5' C A 58 -20.655 -21.327 62.409 1.00166.14 C
ATOM 7 C4' C A 58 -21.463 -20.219 63.034 1.00130.55 C
ATOM 8 O4' C A 58 -21.806 -20.589 64.400 1.00143.95 O
ATOM 9 C3' C A 58 -20.740 -18.877 63.125 1.00134.30 C
ATOM 10 O3' C A 58 -21.672 -17.812 62.965 1.00145.56 O
ATOM 11 C2' C A 58 -20.211 -18.878 64.553 1.00167.59 C
ATOM 12 O2' C A 58 -19.967 -17.597 65.091 1.00293.20 O
ATOM 13 C1' C A 58 -21.332 -19.599 65.293 1.00172.57 C
ATOM 14 N1 C A 58 -20.891 -20.261 66.540 1.00127.43 N
ATOM 15 C2 C A 58 -21.560 -19.979 67.735 1.00127.43 C
ATOM 16 O2 C A 58 -22.522 -19.197 67.716 1.00127.43 O
ATOM 17 N3 C A 58 -21.146 -20.572 68.878 1.00127.43 N
ATOM 18 C4 C A 58 -20.106 -21.407 68.858 1.00127.43 C
ATOM 19 N4 C A 58 -19.731 -21.970 70.009 1.00127.43 N
ATOM 20 C5 C A 58 -19.401 -21.705 67.659 1.00127.43 C
ATOM 21 C6 C A 58 -19.821 -21.112 66.536 1.00127.43 C
ATOM 22 P C A 59 -21.145 -16.338 62.606 1.00163.09 P
ATOM 23 OP1 C A 59 -22.224 -15.661 61.847 1.00207.79 O
ATOM 24 OP2 C A 59 -19.814 -16.495 61.969 1.00102.08 O
ATOM 25 O5' C A 59 -20.982 -15.661 64.037 1.00156.03 O
TER
ATOM 1 O3' G B 54 -21.756 -27.936 74.862 1.00126.69 O
ATOM 2 P A B 55 -20.907 -26.636 74.457 1.00 89.36 P
ATOM 3 OP1 A B 55 -19.592 -26.741 75.137 1.00117.37 O
ATOM 4 OP2 A B 55 -21.759 -25.453 74.734 1.00147.10 O
ATOM 5 O5' A B 55 -20.720 -26.813 72.887 1.00 78.95 O
ATOM 6 C5' A B 55 -19.951 -27.888 72.357 1.00117.07 C
ATOM 7 C4' A B 55 -19.103 -27.442 71.192 1.00 81.04 C
ATOM 8 O4' A B 55 -19.955 -26.797 70.208 1.00 80.37 O
ATOM 9 C3' A B 55 -18.009 -26.434 71.535 1.00 57.94 C
ATOM 10 O3' A B 55 -16.883 -26.643 70.681 1.00104.59 O
ATOM 11 C2' A B 55 -18.668 -25.098 71.204 1.00 52.57 C
ATOM 12 O2' A B 55 -17.765 -24.053 70.911 1.00188.51 O
ATOM 13 C1' A B 55 -19.526 -25.464 69.995 1.00 65.52 C
ATOM 14 N9 A B 55 -20.718 -24.628 69.844 1.00115.47 N
ATOM 15 C8 A B 55 -21.452 -24.046 70.846 1.00116.74 C
ATOM 16 N7 A B 55 -22.473 -23.348 70.418 1.00 93.68 N
ATOM 17 C5 A B 55 -22.412 -23.482 69.039 1.00 95.61 C
ATOM 18 C6 A B 55 -23.219 -22.975 68.007 1.00 92.14 C
ATOM 19 N6 A B 55 -24.288 -22.203 68.216 1.00119.18 N
ATOM 20 N1 A B 55 -22.885 -23.293 66.736 1.00 93.28 N
ATOM 21 C2 A B 55 -21.812 -24.069 66.533 1.00111.14 C
ATOM 22 N3 A B 55 -20.976 -24.604 67.420 1.00103.23 N
ATOM 23 C4 A B 55 -21.335 -24.268 68.670 1.00110.40 C
ATOM 24 P G B 56 -15.808 -27.788 71.027 1.00 94.19 P
ATOM 25 OP1 G B 56 -16.518 -29.087 70.971 1.00110.30 O
ATOM 26 OP2 G B 56 -15.140 -27.395 72.290 1.00 76.37 O
ATOM 27 O5' G B 56 -14.781 -27.683 69.819 1.00 93.49 O
TER
Atoms:
C2: (-21.560,-19.979,67.735)
OP1: (-18.731,-21.897,60.303)
OP2: (-16.876,-21.073,61.849)
C4: (-20.106,-21.407,68.858)
O5': (-19.262,-21.149,62.648)
C3': (-20.740,-18.877,63.125)
C1': (-21.332,-19.599,65.293)
O4': (-21.806,-20.589,64.400)
C5': (-20.655,-21.327,62.409)
P: (-18.172,-21.772,61.669)
O2: (-22.522,-19.197,67.716)
C4': (-21.463,-20.219,63.034)
C2': (-20.211,-18.878,64.553)
O2': (-19.967,-17.597,65.091)
N1: (-20.891,-20.261,66.540)
N3: (-21.146,-20.572,68.878)
N4: (-19.731,-21.970,70.009)
C6: (-19.821,-21.112,66.536)
C5: (-19.401,-21.705,67.659)
O3': (-21.672,-17.812,62.965)
OP1: (-18.731,-21.897,60.303)
OP2: (-16.876,-21.073,61.849)
C4: (-20.106,-21.407,68.858)
O5': (-19.262,-21.149,62.648)
C3': (-20.740,-18.877,63.125)
C1': (-21.332,-19.599,65.293)
O4': (-21.806,-20.589,64.400)
C5': (-20.655,-21.327,62.409)
P: (-18.172,-21.772,61.669)
O2: (-22.522,-19.197,67.716)
C4': (-21.463,-20.219,63.034)
C2': (-20.211,-18.878,64.553)
O2': (-19.967,-17.597,65.091)
N1: (-20.891,-20.261,66.540)
N3: (-21.146,-20.572,68.878)
N4: (-19.731,-21.970,70.009)
C6: (-19.821,-21.112,66.536)
C5: (-19.401,-21.705,67.659)
O3': (-21.672,-17.812,62.965)
OP1: (-19.592,-26.741,75.137)
OP2: (-21.759,-25.453,74.734)
C3': (-18.009,-26.434,71.535)
C1': (-19.526,-25.464,69.995)
C5': (-19.951,-27.888,72.357)
O4': (-19.955,-26.797,70.208)
C8: (-21.452,-24.046,70.846)
O2': (-17.765,-24.053,70.911)
C6: (-23.219,-22.975,68.007)
C5: (-22.412,-23.482,69.039)
C4: (-21.335,-24.268,68.670)
P: (-20.907,-26.636,74.457)
C4': (-19.103,-27.442,71.192)
C2': (-18.668,-25.098,71.204)
C2: (-21.812,-24.069,66.533)
N1: (-22.885,-23.293,66.736)
N3: (-20.976,-24.604,67.420)
N6: (-24.288,-22.203,68.216)
N7: (-22.473,-23.348,70.418)
N9: (-20.718,-24.628,69.844)
O5': (-20.720,-26.813,72.887)
O3': (-16.883,-26.643,70.681)
OP2: (-21.759,-25.453,74.734)
C3': (-18.009,-26.434,71.535)
C1': (-19.526,-25.464,69.995)
C5': (-19.951,-27.888,72.357)
O4': (-19.955,-26.797,70.208)
C8: (-21.452,-24.046,70.846)
O2': (-17.765,-24.053,70.911)
C6: (-23.219,-22.975,68.007)
C5: (-22.412,-23.482,69.039)
C4: (-21.335,-24.268,68.670)
P: (-20.907,-26.636,74.457)
C4': (-19.103,-27.442,71.192)
C2': (-18.668,-25.098,71.204)
C2: (-21.812,-24.069,66.533)
N1: (-22.885,-23.293,66.736)
N3: (-20.976,-24.604,67.420)
N6: (-24.288,-22.203,68.216)
N7: (-22.473,-23.348,70.418)
N9: (-20.718,-24.628,69.844)
O5': (-20.720,-26.813,72.887)
O3': (-16.883,-26.643,70.681)
Image (generated by PyMOL):