Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12125:12126
Extra
PDB:
ATOM 1 O3' A A2124 -16.202 6.226 82.390 1.00 47.83 O
ATOM 2 P U A2125 -15.483 7.675 82.258 1.00 46.89 P
ATOM 3 OP1 U A2125 -15.861 8.200 80.913 1.00 46.97 O
ATOM 4 OP2 U A2125 -14.045 7.503 82.574 1.00 46.52 O
ATOM 5 O5' U A2125 -16.172 8.531 83.389 1.00 47.27 O
ATOM 6 C5' U A2125 -17.561 8.725 83.375 1.00 47.66 C
ATOM 7 C4' U A2125 -18.036 9.336 84.653 1.00 47.97 C
ATOM 8 O4' U A2125 -17.793 8.457 85.774 1.00 47.88 O
ATOM 9 C3' U A2125 -17.362 10.604 85.042 1.00 48.01 C
ATOM 10 O3' U A2125 -17.816 11.664 84.252 1.00 48.23 O
ATOM 11 C2' U A2125 -17.735 10.697 86.508 1.00 48.25 C
ATOM 12 O2' U A2125 -19.081 11.097 86.657 1.00 48.69 O
ATOM 13 C1' U A2125 -17.617 9.226 86.929 1.00 48.05 C
ATOM 14 N1 U A2125 -16.289 8.931 87.476 1.00 47.71 N
ATOM 15 C2 U A2125 -16.070 9.254 88.798 1.00 47.84 C
ATOM 16 O2 U A2125 -16.968 9.682 89.450 1.00 48.21 O
ATOM 17 N3 U A2125 -14.829 9.055 89.337 1.00 47.56 N
ATOM 18 C4 U A2125 -13.789 8.548 88.605 1.00 47.15 C
ATOM 19 O4 U A2125 -12.730 8.380 89.167 1.00 46.93 O
ATOM 20 C5 U A2125 -14.040 8.233 87.224 1.00 47.02 C
ATOM 21 C6 U A2125 -15.260 8.433 86.701 1.00 47.30 C
ATOM 22 P U A2126 -17.053 13.065 84.208 1.00 48.27 P
ATOM 23 OP1 U A2126 -17.918 14.011 83.410 1.00 48.60 O
ATOM 24 OP2 U A2126 -15.640 12.807 83.741 1.00 47.82 O
ATOM 25 O5' U A2126 -17.093 13.458 85.734 1.00 48.48 O
TER
ATOM 1 O3' U B2125 -17.816 11.664 84.252 1.00 48.23 O
ATOM 2 P U B2126 -17.053 13.065 84.208 1.00 48.27 P
ATOM 3 OP1 U B2126 -17.918 14.011 83.410 1.00 48.60 O
ATOM 4 OP2 U B2126 -15.640 12.807 83.741 1.00 47.82 O
ATOM 5 O5' U B2126 -17.093 13.458 85.734 1.00 48.48 O
ATOM 6 C5' U B2126 -16.893 14.770 86.173 1.00 48.69 C
ATOM 7 C4' U B2126 -16.620 14.750 87.627 1.00 48.76 C
ATOM 8 O4' U B2126 -16.324 13.404 88.039 1.00 48.50 O
ATOM 9 C3' U B2126 -15.431 15.525 88.087 1.00 48.64 C
ATOM 10 O3' U B2126 -15.714 16.880 88.160 1.00 48.97 O
ATOM 11 C2' U B2126 -15.158 14.893 89.442 1.00 48.61 C
ATOM 12 O2' U B2126 -16.104 15.349 90.420 1.00 49.05 O
ATOM 13 C1' U B2126 -15.467 13.430 89.144 1.00 48.40 C
ATOM 14 N1 U B2126 -14.257 12.659 88.828 1.00 47.93 N
ATOM 15 C2 U B2126 -13.542 12.220 89.933 1.00 47.81 C
ATOM 16 O2 U B2126 -13.896 12.442 91.103 1.00 48.08 O
ATOM 17 N3 U B2126 -12.408 11.521 89.611 1.00 47.39 N
ATOM 18 C4 U B2126 -11.976 11.215 88.349 1.00 47.09 C
ATOM 19 O4 U B2126 -10.954 10.562 88.243 1.00 46.74 O
ATOM 20 C5 U B2126 -12.773 11.690 87.274 1.00 47.24 C
ATOM 21 C6 U B2126 -13.861 12.388 87.544 1.00 47.65 C
ATOM 22 P A B2127 -14.923 17.895 87.261 1.00 45.81 P
ATOM 23 OP1 A B2127 -15.758 18.187 86.070 1.00 45.97 O
ATOM 24 OP2 A B2127 -13.590 17.310 87.042 1.00 45.34 O
ATOM 25 O5' A B2127 -14.839 19.186 88.221 1.00 46.15 O
TER
ATOM 2 P U A2125 -15.483 7.675 82.258 1.00 46.89 P
ATOM 3 OP1 U A2125 -15.861 8.200 80.913 1.00 46.97 O
ATOM 4 OP2 U A2125 -14.045 7.503 82.574 1.00 46.52 O
ATOM 5 O5' U A2125 -16.172 8.531 83.389 1.00 47.27 O
ATOM 6 C5' U A2125 -17.561 8.725 83.375 1.00 47.66 C
ATOM 7 C4' U A2125 -18.036 9.336 84.653 1.00 47.97 C
ATOM 8 O4' U A2125 -17.793 8.457 85.774 1.00 47.88 O
ATOM 9 C3' U A2125 -17.362 10.604 85.042 1.00 48.01 C
ATOM 10 O3' U A2125 -17.816 11.664 84.252 1.00 48.23 O
ATOM 11 C2' U A2125 -17.735 10.697 86.508 1.00 48.25 C
ATOM 12 O2' U A2125 -19.081 11.097 86.657 1.00 48.69 O
ATOM 13 C1' U A2125 -17.617 9.226 86.929 1.00 48.05 C
ATOM 14 N1 U A2125 -16.289 8.931 87.476 1.00 47.71 N
ATOM 15 C2 U A2125 -16.070 9.254 88.798 1.00 47.84 C
ATOM 16 O2 U A2125 -16.968 9.682 89.450 1.00 48.21 O
ATOM 17 N3 U A2125 -14.829 9.055 89.337 1.00 47.56 N
ATOM 18 C4 U A2125 -13.789 8.548 88.605 1.00 47.15 C
ATOM 19 O4 U A2125 -12.730 8.380 89.167 1.00 46.93 O
ATOM 20 C5 U A2125 -14.040 8.233 87.224 1.00 47.02 C
ATOM 21 C6 U A2125 -15.260 8.433 86.701 1.00 47.30 C
ATOM 22 P U A2126 -17.053 13.065 84.208 1.00 48.27 P
ATOM 23 OP1 U A2126 -17.918 14.011 83.410 1.00 48.60 O
ATOM 24 OP2 U A2126 -15.640 12.807 83.741 1.00 47.82 O
ATOM 25 O5' U A2126 -17.093 13.458 85.734 1.00 48.48 O
TER
ATOM 1 O3' U B2125 -17.816 11.664 84.252 1.00 48.23 O
ATOM 2 P U B2126 -17.053 13.065 84.208 1.00 48.27 P
ATOM 3 OP1 U B2126 -17.918 14.011 83.410 1.00 48.60 O
ATOM 4 OP2 U B2126 -15.640 12.807 83.741 1.00 47.82 O
ATOM 5 O5' U B2126 -17.093 13.458 85.734 1.00 48.48 O
ATOM 6 C5' U B2126 -16.893 14.770 86.173 1.00 48.69 C
ATOM 7 C4' U B2126 -16.620 14.750 87.627 1.00 48.76 C
ATOM 8 O4' U B2126 -16.324 13.404 88.039 1.00 48.50 O
ATOM 9 C3' U B2126 -15.431 15.525 88.087 1.00 48.64 C
ATOM 10 O3' U B2126 -15.714 16.880 88.160 1.00 48.97 O
ATOM 11 C2' U B2126 -15.158 14.893 89.442 1.00 48.61 C
ATOM 12 O2' U B2126 -16.104 15.349 90.420 1.00 49.05 O
ATOM 13 C1' U B2126 -15.467 13.430 89.144 1.00 48.40 C
ATOM 14 N1 U B2126 -14.257 12.659 88.828 1.00 47.93 N
ATOM 15 C2 U B2126 -13.542 12.220 89.933 1.00 47.81 C
ATOM 16 O2 U B2126 -13.896 12.442 91.103 1.00 48.08 O
ATOM 17 N3 U B2126 -12.408 11.521 89.611 1.00 47.39 N
ATOM 18 C4 U B2126 -11.976 11.215 88.349 1.00 47.09 C
ATOM 19 O4 U B2126 -10.954 10.562 88.243 1.00 46.74 O
ATOM 20 C5 U B2126 -12.773 11.690 87.274 1.00 47.24 C
ATOM 21 C6 U B2126 -13.861 12.388 87.544 1.00 47.65 C
ATOM 22 P A B2127 -14.923 17.895 87.261 1.00 45.81 P
ATOM 23 OP1 A B2127 -15.758 18.187 86.070 1.00 45.97 O
ATOM 24 OP2 A B2127 -13.590 17.310 87.042 1.00 45.34 O
ATOM 25 O5' A B2127 -14.839 19.186 88.221 1.00 46.15 O
TER
Atoms:
C4: (-13.789,8.548,88.605)
N3: (-14.829,9.055,89.337)
OP1: (-15.861,8.200,80.913)
OP2: (-14.045,7.503,82.574)
C2: (-16.070,9.254,88.798)
C1': (-17.617,9.226,86.929)
C3': (-17.362,10.604,85.042)
O5': (-16.172,8.531,83.389)
O4': (-17.793,8.457,85.774)
C5': (-17.561,8.725,83.375)
P: (-15.483,7.675,82.258)
C4': (-18.036,9.336,84.653)
C2': (-17.735,10.697,86.508)
O2': (-19.081,11.097,86.657)
N1: (-16.289,8.931,87.476)
O4: (-12.730,8.380,89.167)
O2: (-16.968,9.682,89.450)
C6: (-15.260,8.433,86.701)
C5: (-14.040,8.233,87.224)
O3': (-17.816,11.664,84.252)
N3: (-14.829,9.055,89.337)
OP1: (-15.861,8.200,80.913)
OP2: (-14.045,7.503,82.574)
C2: (-16.070,9.254,88.798)
C1': (-17.617,9.226,86.929)
C3': (-17.362,10.604,85.042)
O5': (-16.172,8.531,83.389)
O4': (-17.793,8.457,85.774)
C5': (-17.561,8.725,83.375)
P: (-15.483,7.675,82.258)
C4': (-18.036,9.336,84.653)
C2': (-17.735,10.697,86.508)
O2': (-19.081,11.097,86.657)
N1: (-16.289,8.931,87.476)
O4: (-12.730,8.380,89.167)
O2: (-16.968,9.682,89.450)
C6: (-15.260,8.433,86.701)
C5: (-14.040,8.233,87.224)
O3': (-17.816,11.664,84.252)
C4: (-11.976,11.215,88.349)
N3: (-12.408,11.521,89.611)
OP1: (-17.918,14.011,83.410)
OP2: (-15.640,12.807,83.741)
C2: (-13.542,12.220,89.933)
C1': (-15.467,13.430,89.144)
C3': (-15.431,15.525,88.087)
O5': (-17.093,13.458,85.734)
O4': (-16.324,13.404,88.039)
C5': (-16.893,14.770,86.173)
P: (-17.053,13.065,84.208)
C4': (-16.620,14.750,87.627)
C2': (-15.158,14.893,89.442)
O2': (-16.104,15.349,90.420)
N1: (-14.257,12.659,88.828)
O4: (-10.954,10.562,88.243)
O2: (-13.896,12.442,91.103)
C6: (-13.861,12.388,87.544)
C5: (-12.773,11.690,87.274)
O3': (-15.714,16.880,88.160)
N3: (-12.408,11.521,89.611)
OP1: (-17.918,14.011,83.410)
OP2: (-15.640,12.807,83.741)
C2: (-13.542,12.220,89.933)
C1': (-15.467,13.430,89.144)
C3': (-15.431,15.525,88.087)
O5': (-17.093,13.458,85.734)
O4': (-16.324,13.404,88.039)
C5': (-16.893,14.770,86.173)
P: (-17.053,13.065,84.208)
C4': (-16.620,14.750,87.627)
C2': (-15.158,14.893,89.442)
O2': (-16.104,15.349,90.420)
N1: (-14.257,12.659,88.828)
O4: (-10.954,10.562,88.243)
O2: (-13.896,12.442,91.103)
C6: (-13.861,12.388,87.544)
C5: (-12.773,11.690,87.274)
O3': (-15.714,16.880,88.160)
Image (generated by PyMOL):