Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02018:02017
Extra
PDB:
ATOM 1 O3' C A2017 49.047 111.181 103.610 1.00 44.20 O
ATOM 2 P G A2018 48.208 111.793 104.830 1.00 46.34 P
ATOM 3 OP1 G A2018 47.324 110.744 105.405 1.00 46.62 O
ATOM 4 OP2 G A2018 47.641 113.087 104.399 1.00 46.04 O
ATOM 5 O5' G A2018 49.346 112.152 105.868 1.00 46.98 O
ATOM 6 C5' G A2018 49.209 111.921 107.269 1.00 45.98 C
ATOM 7 C4' G A2018 50.572 111.680 107.848 1.00 45.45 C
ATOM 8 O4' G A2018 50.880 110.268 107.752 1.00 45.10 O
ATOM 9 C3' G A2018 51.683 112.410 107.099 1.00 45.90 C
ATOM 10 O3' G A2018 52.700 112.824 107.994 1.00 47.87 O
ATOM 11 C2' G A2018 52.174 111.346 106.121 1.00 44.67 C
ATOM 12 O2' G A2018 53.502 111.534 105.695 1.00 42.44 O
ATOM 13 C1' G A2018 52.035 110.081 106.960 1.00 44.59 C
ATOM 14 N9 G A2018 51.857 108.848 106.196 1.00 44.74 N
ATOM 15 C8 G A2018 50.797 108.514 105.390 1.00 43.60 C
ATOM 16 N7 G A2018 50.899 107.316 104.879 1.00 43.25 N
ATOM 17 C5 G A2018 52.102 106.832 105.369 1.00 43.53 C
ATOM 18 C6 G A2018 52.736 105.574 105.184 1.00 44.01 C
ATOM 19 O6 G A2018 52.349 104.597 104.524 1.00 43.71 O
ATOM 20 N1 G A2018 53.939 105.509 105.871 1.00 43.16 N
ATOM 21 C2 G A2018 54.465 106.510 106.634 1.00 41.72 C
ATOM 22 N2 G A2018 55.638 106.255 107.193 1.00 43.18 N
ATOM 23 N3 G A2018 53.886 107.674 106.829 1.00 41.89 N
ATOM 24 C4 G A2018 52.715 107.769 106.172 1.00 43.68 C
ATOM 25 P G A2019 53.041 114.392 108.144 1.00 48.44 P
ATOM 26 OP1 G A2019 53.714 114.838 106.893 1.00 46.61 O
ATOM 27 OP2 G A2019 53.707 114.602 109.451 1.00 49.75 O
ATOM 28 O5' G A2019 51.629 115.114 108.286 1.00 46.37 O
TER
ATOM 1 O3' G B2016 44.138 108.594 104.142 1.00 31.70 O
ATOM 2 P C B2017 45.420 107.633 104.018 1.00 33.86 P
ATOM 3 OP1 C B2017 45.113 106.612 103.004 1.00 34.01 O
ATOM 4 OP2 C B2017 45.844 107.209 105.367 1.00 32.60 O
ATOM 5 O5' C B2017 46.537 108.585 103.417 1.00 32.30 O
ATOM 6 C5' C B2017 47.902 108.228 103.480 1.00 34.19 C
ATOM 7 C4' C B2017 48.695 109.074 102.528 1.00 39.89 C
ATOM 8 O4' C B2017 48.385 108.726 101.164 1.00 42.83 O
ATOM 9 C3' C B2017 48.379 110.558 102.527 1.00 41.80 C
ATOM 10 O3' C B2017 49.047 111.181 103.610 1.00 44.20 O
ATOM 11 C2' C B2017 48.999 111.019 101.203 1.00 42.55 C
ATOM 12 O2' C B2017 50.372 111.323 101.346 1.00 43.01 O
ATOM 13 C1' C B2017 48.892 109.754 100.344 1.00 42.68 C
ATOM 14 N1 C B2017 48.143 109.807 99.082 1.00 43.72 N
ATOM 15 C2 C B2017 48.851 109.620 97.892 1.00 46.88 C
ATOM 16 O2 C B2017 50.079 109.429 97.950 1.00 48.78 O
ATOM 17 N3 C B2017 48.187 109.649 96.711 1.00 46.42 N
ATOM 18 C4 C B2017 46.873 109.853 96.695 1.00 45.72 C
ATOM 19 N4 C B2017 46.260 109.868 95.513 1.00 46.26 N
ATOM 20 C5 C B2017 46.128 110.052 97.893 1.00 45.64 C
ATOM 21 C6 C B2017 46.797 110.025 99.053 1.00 44.59 C
ATOM 22 P G B2018 48.208 111.793 104.830 1.00 46.34 P
ATOM 23 OP1 G B2018 47.324 110.744 105.405 1.00 46.62 O
ATOM 24 OP2 G B2018 47.641 113.087 104.399 1.00 46.04 O
ATOM 25 O5' G B2018 49.346 112.152 105.868 1.00 46.98 O
TER
ATOM 2 P G A2018 48.208 111.793 104.830 1.00 46.34 P
ATOM 3 OP1 G A2018 47.324 110.744 105.405 1.00 46.62 O
ATOM 4 OP2 G A2018 47.641 113.087 104.399 1.00 46.04 O
ATOM 5 O5' G A2018 49.346 112.152 105.868 1.00 46.98 O
ATOM 6 C5' G A2018 49.209 111.921 107.269 1.00 45.98 C
ATOM 7 C4' G A2018 50.572 111.680 107.848 1.00 45.45 C
ATOM 8 O4' G A2018 50.880 110.268 107.752 1.00 45.10 O
ATOM 9 C3' G A2018 51.683 112.410 107.099 1.00 45.90 C
ATOM 10 O3' G A2018 52.700 112.824 107.994 1.00 47.87 O
ATOM 11 C2' G A2018 52.174 111.346 106.121 1.00 44.67 C
ATOM 12 O2' G A2018 53.502 111.534 105.695 1.00 42.44 O
ATOM 13 C1' G A2018 52.035 110.081 106.960 1.00 44.59 C
ATOM 14 N9 G A2018 51.857 108.848 106.196 1.00 44.74 N
ATOM 15 C8 G A2018 50.797 108.514 105.390 1.00 43.60 C
ATOM 16 N7 G A2018 50.899 107.316 104.879 1.00 43.25 N
ATOM 17 C5 G A2018 52.102 106.832 105.369 1.00 43.53 C
ATOM 18 C6 G A2018 52.736 105.574 105.184 1.00 44.01 C
ATOM 19 O6 G A2018 52.349 104.597 104.524 1.00 43.71 O
ATOM 20 N1 G A2018 53.939 105.509 105.871 1.00 43.16 N
ATOM 21 C2 G A2018 54.465 106.510 106.634 1.00 41.72 C
ATOM 22 N2 G A2018 55.638 106.255 107.193 1.00 43.18 N
ATOM 23 N3 G A2018 53.886 107.674 106.829 1.00 41.89 N
ATOM 24 C4 G A2018 52.715 107.769 106.172 1.00 43.68 C
ATOM 25 P G A2019 53.041 114.392 108.144 1.00 48.44 P
ATOM 26 OP1 G A2019 53.714 114.838 106.893 1.00 46.61 O
ATOM 27 OP2 G A2019 53.707 114.602 109.451 1.00 49.75 O
ATOM 28 O5' G A2019 51.629 115.114 108.286 1.00 46.37 O
TER
ATOM 1 O3' G B2016 44.138 108.594 104.142 1.00 31.70 O
ATOM 2 P C B2017 45.420 107.633 104.018 1.00 33.86 P
ATOM 3 OP1 C B2017 45.113 106.612 103.004 1.00 34.01 O
ATOM 4 OP2 C B2017 45.844 107.209 105.367 1.00 32.60 O
ATOM 5 O5' C B2017 46.537 108.585 103.417 1.00 32.30 O
ATOM 6 C5' C B2017 47.902 108.228 103.480 1.00 34.19 C
ATOM 7 C4' C B2017 48.695 109.074 102.528 1.00 39.89 C
ATOM 8 O4' C B2017 48.385 108.726 101.164 1.00 42.83 O
ATOM 9 C3' C B2017 48.379 110.558 102.527 1.00 41.80 C
ATOM 10 O3' C B2017 49.047 111.181 103.610 1.00 44.20 O
ATOM 11 C2' C B2017 48.999 111.019 101.203 1.00 42.55 C
ATOM 12 O2' C B2017 50.372 111.323 101.346 1.00 43.01 O
ATOM 13 C1' C B2017 48.892 109.754 100.344 1.00 42.68 C
ATOM 14 N1 C B2017 48.143 109.807 99.082 1.00 43.72 N
ATOM 15 C2 C B2017 48.851 109.620 97.892 1.00 46.88 C
ATOM 16 O2 C B2017 50.079 109.429 97.950 1.00 48.78 O
ATOM 17 N3 C B2017 48.187 109.649 96.711 1.00 46.42 N
ATOM 18 C4 C B2017 46.873 109.853 96.695 1.00 45.72 C
ATOM 19 N4 C B2017 46.260 109.868 95.513 1.00 46.26 N
ATOM 20 C5 C B2017 46.128 110.052 97.893 1.00 45.64 C
ATOM 21 C6 C B2017 46.797 110.025 99.053 1.00 44.59 C
ATOM 22 P G B2018 48.208 111.793 104.830 1.00 46.34 P
ATOM 23 OP1 G B2018 47.324 110.744 105.405 1.00 46.62 O
ATOM 24 OP2 G B2018 47.641 113.087 104.399 1.00 46.04 O
ATOM 25 O5' G B2018 49.346 112.152 105.868 1.00 46.98 O
TER
Atoms:
OP1: (47.324,110.744,105.405)
OP2: (47.641,113.087,104.399)
C3': (51.683,112.410,107.099)
C1': (52.035,110.081,106.960)
C5': (49.209,111.921,107.269)
O6: (52.349,104.597,104.524)
O4': (50.880,110.268,107.752)
C8: (50.797,108.514,105.390)
C2: (54.465,106.510,106.634)
C6: (52.736,105.574,105.184)
C5: (52.102,106.832,105.369)
C4: (52.715,107.769,106.172)
P: (48.208,111.793,104.830)
C4': (50.572,111.680,107.848)
C2': (52.174,111.346,106.121)
O2': (53.502,111.534,105.695)
N1: (53.939,105.509,105.871)
N2: (55.638,106.255,107.193)
N3: (53.886,107.674,106.829)
N7: (50.899,107.316,104.879)
N9: (51.857,108.848,106.196)
O5': (49.346,112.152,105.868)
O3': (52.700,112.824,107.994)
OP2: (47.641,113.087,104.399)
C3': (51.683,112.410,107.099)
C1': (52.035,110.081,106.960)
C5': (49.209,111.921,107.269)
O6: (52.349,104.597,104.524)
O4': (50.880,110.268,107.752)
C8: (50.797,108.514,105.390)
C2: (54.465,106.510,106.634)
C6: (52.736,105.574,105.184)
C5: (52.102,106.832,105.369)
C4: (52.715,107.769,106.172)
P: (48.208,111.793,104.830)
C4': (50.572,111.680,107.848)
C2': (52.174,111.346,106.121)
O2': (53.502,111.534,105.695)
N1: (53.939,105.509,105.871)
N2: (55.638,106.255,107.193)
N3: (53.886,107.674,106.829)
N7: (50.899,107.316,104.879)
N9: (51.857,108.848,106.196)
O5': (49.346,112.152,105.868)
O3': (52.700,112.824,107.994)
C2: (48.851,109.620,97.892)
OP1: (45.113,106.612,103.004)
OP2: (45.844,107.209,105.367)
C4: (46.873,109.853,96.695)
O5': (46.537,108.585,103.417)
C3': (48.379,110.558,102.527)
C1': (48.892,109.754,100.344)
O4': (48.385,108.726,101.164)
C5': (47.902,108.228,103.480)
P: (45.420,107.633,104.018)
O2: (50.079,109.429,97.950)
C4': (48.695,109.074,102.528)
C2': (48.999,111.019,101.203)
O2': (50.372,111.323,101.346)
N1: (48.143,109.807,99.082)
N3: (48.187,109.649,96.711)
N4: (46.260,109.868,95.513)
C6: (46.797,110.025,99.053)
C5: (46.128,110.052,97.893)
O3': (49.047,111.181,103.610)
OP1: (45.113,106.612,103.004)
OP2: (45.844,107.209,105.367)
C4: (46.873,109.853,96.695)
O5': (46.537,108.585,103.417)
C3': (48.379,110.558,102.527)
C1': (48.892,109.754,100.344)
O4': (48.385,108.726,101.164)
C5': (47.902,108.228,103.480)
P: (45.420,107.633,104.018)
O2: (50.079,109.429,97.950)
C4': (48.695,109.074,102.528)
C2': (48.999,111.019,101.203)
O2': (50.372,111.323,101.346)
N1: (48.143,109.807,99.082)
N3: (48.187,109.649,96.711)
N4: (46.260,109.868,95.513)
C6: (46.797,110.025,99.053)
C5: (46.128,110.052,97.893)
O3': (49.047,111.181,103.610)
Image (generated by PyMOL):