Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0612:0613
Extra
PDB:
ATOM 1 O3' U A 611 45.562 109.697 82.690 1.00 35.98 O
ATOM 2 P U A 612 46.033 108.267 83.227 1.00 35.11 P
ATOM 3 OP1 U A 612 46.628 107.596 82.068 1.00 34.59 O
ATOM 4 OP2 U A 612 44.910 107.633 83.949 1.00 38.44 O
ATOM 5 O5' U A 612 47.183 108.595 84.278 1.00 37.52 O
ATOM 6 C5' U A 612 48.505 108.971 83.847 1.00 35.98 C
ATOM 7 C4' U A 612 49.394 109.200 85.043 1.00 36.26 C
ATOM 8 O4' U A 612 48.817 110.235 85.885 1.00 37.13 O
ATOM 9 C3' U A 612 49.542 108.024 85.994 1.00 37.48 C
ATOM 10 O3' U A 612 50.517 107.118 85.540 1.00 38.29 O
ATOM 11 C2' U A 612 50.003 108.706 87.273 1.00 37.32 C
ATOM 12 O2' U A 612 51.365 109.060 87.226 1.00 36.18 O
ATOM 13 C1' U A 612 49.167 109.986 87.243 1.00 38.28 C
ATOM 14 N1 U A 612 47.943 109.862 88.051 1.00 41.19 N
ATOM 15 C2 U A 612 48.035 110.187 89.392 1.00 41.72 C
ATOM 16 O2 U A 612 49.068 110.557 89.909 1.00 41.21 O
ATOM 17 N3 U A 612 46.868 110.059 90.104 1.00 43.58 N
ATOM 18 C4 U A 612 45.645 109.635 89.626 1.00 43.94 C
ATOM 19 O4 U A 612 44.686 109.567 90.395 1.00 44.55 O
ATOM 20 C5 U A 612 45.629 109.310 88.230 1.00 41.86 C
ATOM 21 C6 U A 612 46.747 109.431 87.508 1.00 40.31 C
ATOM 22 P U A 613 50.196 105.553 85.523 1.00 41.12 P
ATOM 23 OP1 U A 613 51.426 104.904 85.030 1.00 35.94 O
ATOM 24 OP2 U A 613 48.920 105.361 84.804 1.00 38.35 O
ATOM 25 O5' U A 613 49.951 105.161 87.056 1.00 41.83 O
TER
ATOM 1 O3' U B 612 50.517 107.118 85.540 1.00 38.29 O
ATOM 2 P U B 613 50.196 105.553 85.523 1.00 41.12 P
ATOM 3 OP1 U B 613 51.426 104.904 85.030 1.00 35.94 O
ATOM 4 OP2 U B 613 48.920 105.361 84.804 1.00 38.35 O
ATOM 5 O5' U B 613 49.951 105.161 87.056 1.00 41.83 O
ATOM 6 C5' U B 613 50.979 105.343 88.035 1.00 39.63 C
ATOM 7 C4' U B 613 50.420 105.295 89.447 1.00 39.91 C
ATOM 8 O4' U B 613 49.388 106.300 89.632 1.00 40.39 O
ATOM 9 C3' U B 613 49.710 104.043 89.945 1.00 38.10 C
ATOM 10 O3' U B 613 50.628 102.996 90.246 1.00 38.44 O
ATOM 11 C2' U B 613 49.096 104.576 91.233 1.00 37.25 C
ATOM 12 O2' U B 613 50.067 104.734 92.246 1.00 37.32 O
ATOM 13 C1' U B 613 48.656 105.979 90.804 1.00 38.16 C
ATOM 14 N1 U B 613 47.219 106.034 90.510 1.00 39.58 N
ATOM 15 C2 U B 613 46.360 106.257 91.578 1.00 38.76 C
ATOM 16 O2 U B 613 46.749 106.435 92.721 1.00 39.17 O
ATOM 17 N3 U B 613 45.030 106.265 91.257 1.00 39.48 N
ATOM 18 C4 U B 613 44.477 106.081 90.011 1.00 38.30 C
ATOM 19 O4 U B 613 43.258 106.109 89.890 1.00 36.61 O
ATOM 20 C5 U B 613 45.426 105.868 88.957 1.00 38.51 C
ATOM 21 C6 U B 613 46.731 105.853 89.234 1.00 36.25 C
ATOM 22 P U B 614 50.225 101.465 89.955 1.00 37.61 P
ATOM 23 OP1 U B 614 51.428 100.621 90.138 1.00 35.11 O
ATOM 24 OP2 U B 614 49.482 101.397 88.678 1.00 33.52 O
ATOM 25 O5' U B 614 49.202 101.126 91.122 1.00 37.17 O
TER
ATOM 2 P U A 612 46.033 108.267 83.227 1.00 35.11 P
ATOM 3 OP1 U A 612 46.628 107.596 82.068 1.00 34.59 O
ATOM 4 OP2 U A 612 44.910 107.633 83.949 1.00 38.44 O
ATOM 5 O5' U A 612 47.183 108.595 84.278 1.00 37.52 O
ATOM 6 C5' U A 612 48.505 108.971 83.847 1.00 35.98 C
ATOM 7 C4' U A 612 49.394 109.200 85.043 1.00 36.26 C
ATOM 8 O4' U A 612 48.817 110.235 85.885 1.00 37.13 O
ATOM 9 C3' U A 612 49.542 108.024 85.994 1.00 37.48 C
ATOM 10 O3' U A 612 50.517 107.118 85.540 1.00 38.29 O
ATOM 11 C2' U A 612 50.003 108.706 87.273 1.00 37.32 C
ATOM 12 O2' U A 612 51.365 109.060 87.226 1.00 36.18 O
ATOM 13 C1' U A 612 49.167 109.986 87.243 1.00 38.28 C
ATOM 14 N1 U A 612 47.943 109.862 88.051 1.00 41.19 N
ATOM 15 C2 U A 612 48.035 110.187 89.392 1.00 41.72 C
ATOM 16 O2 U A 612 49.068 110.557 89.909 1.00 41.21 O
ATOM 17 N3 U A 612 46.868 110.059 90.104 1.00 43.58 N
ATOM 18 C4 U A 612 45.645 109.635 89.626 1.00 43.94 C
ATOM 19 O4 U A 612 44.686 109.567 90.395 1.00 44.55 O
ATOM 20 C5 U A 612 45.629 109.310 88.230 1.00 41.86 C
ATOM 21 C6 U A 612 46.747 109.431 87.508 1.00 40.31 C
ATOM 22 P U A 613 50.196 105.553 85.523 1.00 41.12 P
ATOM 23 OP1 U A 613 51.426 104.904 85.030 1.00 35.94 O
ATOM 24 OP2 U A 613 48.920 105.361 84.804 1.00 38.35 O
ATOM 25 O5' U A 613 49.951 105.161 87.056 1.00 41.83 O
TER
ATOM 1 O3' U B 612 50.517 107.118 85.540 1.00 38.29 O
ATOM 2 P U B 613 50.196 105.553 85.523 1.00 41.12 P
ATOM 3 OP1 U B 613 51.426 104.904 85.030 1.00 35.94 O
ATOM 4 OP2 U B 613 48.920 105.361 84.804 1.00 38.35 O
ATOM 5 O5' U B 613 49.951 105.161 87.056 1.00 41.83 O
ATOM 6 C5' U B 613 50.979 105.343 88.035 1.00 39.63 C
ATOM 7 C4' U B 613 50.420 105.295 89.447 1.00 39.91 C
ATOM 8 O4' U B 613 49.388 106.300 89.632 1.00 40.39 O
ATOM 9 C3' U B 613 49.710 104.043 89.945 1.00 38.10 C
ATOM 10 O3' U B 613 50.628 102.996 90.246 1.00 38.44 O
ATOM 11 C2' U B 613 49.096 104.576 91.233 1.00 37.25 C
ATOM 12 O2' U B 613 50.067 104.734 92.246 1.00 37.32 O
ATOM 13 C1' U B 613 48.656 105.979 90.804 1.00 38.16 C
ATOM 14 N1 U B 613 47.219 106.034 90.510 1.00 39.58 N
ATOM 15 C2 U B 613 46.360 106.257 91.578 1.00 38.76 C
ATOM 16 O2 U B 613 46.749 106.435 92.721 1.00 39.17 O
ATOM 17 N3 U B 613 45.030 106.265 91.257 1.00 39.48 N
ATOM 18 C4 U B 613 44.477 106.081 90.011 1.00 38.30 C
ATOM 19 O4 U B 613 43.258 106.109 89.890 1.00 36.61 O
ATOM 20 C5 U B 613 45.426 105.868 88.957 1.00 38.51 C
ATOM 21 C6 U B 613 46.731 105.853 89.234 1.00 36.25 C
ATOM 22 P U B 614 50.225 101.465 89.955 1.00 37.61 P
ATOM 23 OP1 U B 614 51.428 100.621 90.138 1.00 35.11 O
ATOM 24 OP2 U B 614 49.482 101.397 88.678 1.00 33.52 O
ATOM 25 O5' U B 614 49.202 101.126 91.122 1.00 37.17 O
TER
Atoms:
C4: (45.645,109.635,89.626)
N3: (46.868,110.059,90.104)
OP1: (46.628,107.596,82.068)
OP2: (44.910,107.633,83.949)
C2: (48.035,110.187,89.392)
C1': (49.167,109.986,87.243)
C3': (49.542,108.024,85.994)
O5': (47.183,108.595,84.278)
O4': (48.817,110.235,85.885)
C5': (48.505,108.971,83.847)
P: (46.033,108.267,83.227)
C4': (49.394,109.200,85.043)
C2': (50.003,108.706,87.273)
O2': (51.365,109.060,87.226)
N1: (47.943,109.862,88.051)
O4: (44.686,109.567,90.395)
O2: (49.068,110.557,89.909)
C6: (46.747,109.431,87.508)
C5: (45.629,109.310,88.230)
O3': (50.517,107.118,85.540)
N3: (46.868,110.059,90.104)
OP1: (46.628,107.596,82.068)
OP2: (44.910,107.633,83.949)
C2: (48.035,110.187,89.392)
C1': (49.167,109.986,87.243)
C3': (49.542,108.024,85.994)
O5': (47.183,108.595,84.278)
O4': (48.817,110.235,85.885)
C5': (48.505,108.971,83.847)
P: (46.033,108.267,83.227)
C4': (49.394,109.200,85.043)
C2': (50.003,108.706,87.273)
O2': (51.365,109.060,87.226)
N1: (47.943,109.862,88.051)
O4: (44.686,109.567,90.395)
O2: (49.068,110.557,89.909)
C6: (46.747,109.431,87.508)
C5: (45.629,109.310,88.230)
O3': (50.517,107.118,85.540)
C4: (44.477,106.081,90.011)
N3: (45.030,106.265,91.257)
OP1: (51.426,104.904,85.030)
OP2: (48.920,105.361,84.804)
C2: (46.360,106.257,91.578)
C1': (48.656,105.979,90.804)
C3': (49.710,104.043,89.945)
O5': (49.951,105.161,87.056)
O4': (49.388,106.300,89.632)
C5': (50.979,105.343,88.035)
P: (50.196,105.553,85.523)
C4': (50.420,105.295,89.447)
C2': (49.096,104.576,91.233)
O2': (50.067,104.734,92.246)
N1: (47.219,106.034,90.510)
O4: (43.258,106.109,89.890)
O2: (46.749,106.435,92.721)
C6: (46.731,105.853,89.234)
C5: (45.426,105.868,88.957)
O3': (50.628,102.996,90.246)
N3: (45.030,106.265,91.257)
OP1: (51.426,104.904,85.030)
OP2: (48.920,105.361,84.804)
C2: (46.360,106.257,91.578)
C1': (48.656,105.979,90.804)
C3': (49.710,104.043,89.945)
O5': (49.951,105.161,87.056)
O4': (49.388,106.300,89.632)
C5': (50.979,105.343,88.035)
P: (50.196,105.553,85.523)
C4': (50.420,105.295,89.447)
C2': (49.096,104.576,91.233)
O2': (50.067,104.734,92.246)
N1: (47.219,106.034,90.510)
O4: (43.258,106.109,89.890)
O2: (46.749,106.435,92.721)
C6: (46.731,105.853,89.234)
C5: (45.426,105.868,88.957)
O3': (50.628,102.996,90.246)
Image (generated by PyMOL):