ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZX7:A11:A10

Extra

PDB:
ATOM 1 O3' C A 10 24.648 -9.653 6.626 1.00 38.56 O
ATOM 2 P G A 11 24.031 -11.056 7.108 1.00 39.90 P
ATOM 3 OP1 G A 11 25.034 -11.725 7.967 1.00 39.53 O
ATOM 4 OP2 G A 11 23.508 -11.758 5.904 1.00 40.72 O
ATOM 5 O5' G A 11 22.792 -10.667 8.033 1.00 37.52 O
ATOM 6 C5' G A 11 21.653 -11.517 8.086 1.00 33.48 C
ATOM 7 C4' G A 11 20.577 -10.929 8.965 1.00 31.49 C
ATOM 8 O4' G A 11 20.227 -9.589 8.516 1.00 31.34 O
ATOM 9 C3' G A 11 19.276 -11.713 8.892 1.00 29.52 C
ATOM 10 O3' G A 11 19.306 -12.784 9.820 1.00 29.06 O
ATOM 11 C2' G A 11 18.232 -10.659 9.234 1.00 28.95 C
ATOM 12 O2' G A 11 18.125 -10.426 10.627 1.00 26.75 O
ATOM 13 C1' G A 11 18.812 -9.429 8.526 1.00 29.23 C
ATOM 14 N9 G A 11 18.379 -9.324 7.137 1.00 29.20 N
ATOM 15 C8 G A 11 19.192 -9.357 6.030 1.00 30.60 C
ATOM 16 N7 G A 11 18.538 -9.253 4.906 1.00 30.48 N
ATOM 17 C5 G A 11 17.209 -9.144 5.288 1.00 28.93 C
ATOM 18 C6 G A 11 16.040 -9.010 4.500 1.00 29.81 C
ATOM 19 O6 G A 11 15.941 -8.963 3.267 1.00 30.20 O
ATOM 20 N1 G A 11 14.900 -8.921 5.290 1.00 29.07 N
ATOM 21 C2 G A 11 14.883 -8.958 6.662 1.00 29.72 C
ATOM 22 N2 G A 11 13.664 -8.834 7.243 1.00 28.46 N
ATOM 23 N3 G A 11 15.969 -9.099 7.413 1.00 28.14 N
ATOM 24 C4 G A 11 17.090 -9.181 6.664 1.00 29.91 C
ATOM 25 P C A 12 18.833 -14.247 9.364 1.00 26.77 P
ATOM 26 OP1 C A 12 19.231 -15.173 10.456 1.00 26.40 O
ATOM 27 OP2 C A 12 19.262 -14.523 7.964 1.00 24.82 O
ATOM 28 O5' C A 12 17.250 -14.122 9.375 1.00 26.37 O
TER

ATOM 1 O3' U B 9 26.195 -5.804 1.885 1.00 30.29 O
ATOM 2 P C B 10 26.189 -7.408 1.937 1.00 31.35 P
ATOM 3 OP1 C B 10 27.597 -7.803 2.225 1.00 30.88 O
ATOM 4 OP2 C B 10 25.505 -7.939 0.732 1.00 31.55 O
ATOM 5 O5' C B 10 25.300 -7.738 3.217 1.00 29.33 O
ATOM 6 C5' C B 10 25.778 -7.426 4.522 1.00 31.44 C
ATOM 7 C4' C B 10 24.659 -7.526 5.529 1.00 32.70 C
ATOM 8 O4' C B 10 23.612 -6.611 5.140 1.00 32.21 O
ATOM 9 C3' C B 10 23.972 -8.880 5.641 1.00 35.08 C
ATOM 10 O3' C B 10 24.648 -9.653 6.626 1.00 38.56 O
ATOM 11 C2' C B 10 22.582 -8.518 6.150 1.00 35.28 C
ATOM 12 O2' C B 10 22.548 -8.421 7.563 1.00 36.54 O
ATOM 13 C1' C B 10 22.363 -7.128 5.541 1.00 32.99 C
ATOM 14 N1 C B 10 21.431 -7.044 4.407 1.00 30.41 N
ATOM 15 C2 C B 10 20.233 -6.352 4.596 1.00 27.12 C
ATOM 16 O2 C B 10 20.014 -5.850 5.703 1.00 24.36 O
ATOM 17 N3 C B 10 19.358 -6.238 3.572 1.00 25.67 N
ATOM 18 C4 C B 10 19.648 -6.778 2.390 1.00 26.69 C
ATOM 19 N4 C B 10 18.757 -6.629 1.406 1.00 26.61 N
ATOM 20 C5 C B 10 20.866 -7.494 2.165 1.00 28.31 C
ATOM 21 C6 C B 10 21.719 -7.608 3.198 1.00 28.37 C
ATOM 22 P G B 11 24.031 -11.056 7.108 1.00 39.90 P
ATOM 23 OP1 G B 11 25.034 -11.725 7.967 1.00 39.53 O
ATOM 24 OP2 G B 11 23.508 -11.758 5.904 1.00 40.72 O
ATOM 25 O5' G B 11 22.792 -10.667 8.033 1.00 37.52 O
TER

Atoms:
OP1: (25.034,-11.725,7.967)
OP2: (23.508,-11.758,5.904)
C3': (19.276,-11.713,8.892)
C1': (18.812,-9.429,8.526)
C5': (21.653,-11.517,8.086)
O6: (15.941,-8.963,3.267)
O4': (20.227,-9.589,8.516)
C8: (19.192,-9.357,6.030)
C2: (14.883,-8.958,6.662)
C6: (16.040,-9.010,4.500)
C5: (17.209,-9.144,5.288)
C4: (17.090,-9.181,6.664)
P: (24.031,-11.056,7.108)
C4': (20.577,-10.929,8.965)
C2': (18.232,-10.659,9.234)
O2': (18.125,-10.426,10.627)
N1: (14.900,-8.921,5.290)
N2: (13.664,-8.834,7.243)
N3: (15.969,-9.099,7.413)
N7: (18.538,-9.253,4.906)
N9: (18.379,-9.324,7.137)
O5': (22.792,-10.667,8.033)
O3': (19.306,-12.784,9.820)
C2: (20.233,-6.352,4.596)
OP1: (27.597,-7.803,2.225)
OP2: (25.505,-7.939,0.732)
C4: (19.648,-6.778,2.390)
O5': (25.300,-7.738,3.217)
C3': (23.972,-8.880,5.641)
C1': (22.363,-7.128,5.541)
O4': (23.612,-6.611,5.140)
C5': (25.778,-7.426,4.522)
P: (26.189,-7.408,1.937)
O2: (20.014,-5.850,5.703)
C4': (24.659,-7.526,5.529)
C2': (22.582,-8.518,6.150)
O2': (22.548,-8.421,7.563)
N1: (21.431,-7.044,4.407)
N3: (19.358,-6.238,3.572)
N4: (18.757,-6.629,1.406)
C6: (21.719,-7.608,3.198)
C5: (20.866,-7.494,2.165)
O3': (24.648,-9.653,6.626)
Image (generated by PyMOL):
PyMOL image
show in jmol