Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:V26:V25
Extra
PDB:
ATOM 1 O3' C A 25 -62.146 119.195 106.712 1.00 19.50 O
ATOM 2 P G A 26 -63.211 118.792 105.570 1.00 71.75 P
ATOM 3 OP1 G A 26 -62.423 118.184 104.465 1.00 56.86 O
ATOM 4 OP2 G A 26 -64.099 119.955 105.287 1.00 56.86 O
ATOM 5 O5' G A 26 -64.098 117.651 106.239 1.00 36.55 O
ATOM 6 C5' G A 26 -63.495 116.431 106.708 1.00 36.55 C
ATOM 7 C4' G A 26 -64.228 115.932 107.925 1.00 36.55 C
ATOM 8 O4' G A 26 -64.352 117.046 108.845 1.00 36.55 O
ATOM 9 C3' G A 26 -65.653 115.457 107.681 1.00 36.55 C
ATOM 10 O3' G A 26 -65.670 114.058 107.359 1.00 36.55 O
ATOM 11 C2' G A 26 -66.326 115.746 109.017 1.00 36.55 C
ATOM 12 O2' G A 26 -66.048 114.754 109.981 1.00 36.55 O
ATOM 13 C1' G A 26 -65.624 117.034 109.452 1.00 36.55 C
ATOM 14 N9 G A 26 -66.319 118.241 109.023 1.00 30.24 N
ATOM 15 C8 G A 26 -65.855 119.169 108.126 1.00 30.24 C
ATOM 16 N7 G A 26 -66.708 120.127 107.893 1.00 30.24 N
ATOM 17 C5 G A 26 -67.796 119.824 108.696 1.00 30.24 C
ATOM 18 C6 G A 26 -69.032 120.498 108.853 1.00 30.24 C
ATOM 19 O6 G A 26 -69.416 121.540 108.301 1.00 30.24 O
ATOM 20 N1 G A 26 -69.866 119.835 109.749 1.00 30.24 N
ATOM 21 C2 G A 26 -69.550 118.676 110.406 1.00 30.24 C
ATOM 22 N2 G A 26 -70.499 118.182 111.206 1.00 30.24 N
ATOM 23 N3 G A 26 -68.394 118.043 110.280 1.00 30.24 N
ATOM 24 C4 G A 26 -67.572 118.667 109.409 1.00 30.24 C
ATOM 25 P U A 27 -66.695 113.493 106.246 1.00 39.52 P
ATOM 26 OP1 U A 27 -66.431 112.030 106.117 1.00 48.75 O
ATOM 27 OP2 U A 27 -66.603 114.362 105.047 1.00 48.75 O
ATOM 28 O5' U A 27 -68.138 113.669 106.906 1.00 39.68 O
TER
ATOM 1 O3' U B 24 -61.861 125.450 106.929 1.00 32.77 O
ATOM 2 P C B 25 -62.665 124.331 106.083 1.00 34.36 P
ATOM 3 OP1 C B 25 -61.911 124.151 104.822 1.00 33.43 O
ATOM 4 OP2 C B 25 -64.107 124.693 106.029 1.00 33.43 O
ATOM 5 O5' C B 25 -62.544 122.999 106.957 1.00 19.50 O
ATOM 6 C5' C B 25 -61.284 122.318 107.086 1.00 19.50 C
ATOM 7 C4' C B 25 -61.407 121.137 108.019 1.00 19.50 C
ATOM 8 O4' C B 25 -61.691 121.597 109.360 1.00 19.50 O
ATOM 9 C3' C B 25 -62.513 120.136 107.724 1.00 19.50 C
ATOM 10 O3' C B 25 -62.146 119.195 106.712 1.00 19.50 O
ATOM 11 C2' C B 25 -62.714 119.472 109.081 1.00 19.50 C
ATOM 12 O2' C B 25 -61.769 118.461 109.363 1.00 19.50 O
ATOM 13 C1' C B 25 -62.485 120.640 110.033 1.00 19.50 C
ATOM 14 N1 C B 25 -63.779 121.236 110.363 1.00 17.36 N
ATOM 15 C2 C B 25 -64.535 120.665 111.400 1.00 17.36 C
ATOM 16 O2 C B 25 -64.026 119.772 112.090 1.00 17.36 O
ATOM 17 N3 C B 25 -65.792 121.111 111.624 1.00 17.36 N
ATOM 18 C4 C B 25 -66.288 122.105 110.881 1.00 17.36 C
ATOM 19 N4 C B 25 -67.551 122.480 111.095 1.00 17.36 N
ATOM 20 C5 C B 25 -65.511 122.754 109.872 1.00 17.36 C
ATOM 21 C6 C B 25 -64.272 122.293 109.650 1.00 17.36 C
ATOM 22 P G B 26 -63.211 118.792 105.570 1.00 71.75 P
ATOM 23 OP1 G B 26 -62.423 118.184 104.465 1.00 56.86 O
ATOM 24 OP2 G B 26 -64.099 119.955 105.287 1.00 56.86 O
ATOM 25 O5' G B 26 -64.098 117.651 106.239 1.00 36.55 O
TER
ATOM 2 P G A 26 -63.211 118.792 105.570 1.00 71.75 P
ATOM 3 OP1 G A 26 -62.423 118.184 104.465 1.00 56.86 O
ATOM 4 OP2 G A 26 -64.099 119.955 105.287 1.00 56.86 O
ATOM 5 O5' G A 26 -64.098 117.651 106.239 1.00 36.55 O
ATOM 6 C5' G A 26 -63.495 116.431 106.708 1.00 36.55 C
ATOM 7 C4' G A 26 -64.228 115.932 107.925 1.00 36.55 C
ATOM 8 O4' G A 26 -64.352 117.046 108.845 1.00 36.55 O
ATOM 9 C3' G A 26 -65.653 115.457 107.681 1.00 36.55 C
ATOM 10 O3' G A 26 -65.670 114.058 107.359 1.00 36.55 O
ATOM 11 C2' G A 26 -66.326 115.746 109.017 1.00 36.55 C
ATOM 12 O2' G A 26 -66.048 114.754 109.981 1.00 36.55 O
ATOM 13 C1' G A 26 -65.624 117.034 109.452 1.00 36.55 C
ATOM 14 N9 G A 26 -66.319 118.241 109.023 1.00 30.24 N
ATOM 15 C8 G A 26 -65.855 119.169 108.126 1.00 30.24 C
ATOM 16 N7 G A 26 -66.708 120.127 107.893 1.00 30.24 N
ATOM 17 C5 G A 26 -67.796 119.824 108.696 1.00 30.24 C
ATOM 18 C6 G A 26 -69.032 120.498 108.853 1.00 30.24 C
ATOM 19 O6 G A 26 -69.416 121.540 108.301 1.00 30.24 O
ATOM 20 N1 G A 26 -69.866 119.835 109.749 1.00 30.24 N
ATOM 21 C2 G A 26 -69.550 118.676 110.406 1.00 30.24 C
ATOM 22 N2 G A 26 -70.499 118.182 111.206 1.00 30.24 N
ATOM 23 N3 G A 26 -68.394 118.043 110.280 1.00 30.24 N
ATOM 24 C4 G A 26 -67.572 118.667 109.409 1.00 30.24 C
ATOM 25 P U A 27 -66.695 113.493 106.246 1.00 39.52 P
ATOM 26 OP1 U A 27 -66.431 112.030 106.117 1.00 48.75 O
ATOM 27 OP2 U A 27 -66.603 114.362 105.047 1.00 48.75 O
ATOM 28 O5' U A 27 -68.138 113.669 106.906 1.00 39.68 O
TER
ATOM 1 O3' U B 24 -61.861 125.450 106.929 1.00 32.77 O
ATOM 2 P C B 25 -62.665 124.331 106.083 1.00 34.36 P
ATOM 3 OP1 C B 25 -61.911 124.151 104.822 1.00 33.43 O
ATOM 4 OP2 C B 25 -64.107 124.693 106.029 1.00 33.43 O
ATOM 5 O5' C B 25 -62.544 122.999 106.957 1.00 19.50 O
ATOM 6 C5' C B 25 -61.284 122.318 107.086 1.00 19.50 C
ATOM 7 C4' C B 25 -61.407 121.137 108.019 1.00 19.50 C
ATOM 8 O4' C B 25 -61.691 121.597 109.360 1.00 19.50 O
ATOM 9 C3' C B 25 -62.513 120.136 107.724 1.00 19.50 C
ATOM 10 O3' C B 25 -62.146 119.195 106.712 1.00 19.50 O
ATOM 11 C2' C B 25 -62.714 119.472 109.081 1.00 19.50 C
ATOM 12 O2' C B 25 -61.769 118.461 109.363 1.00 19.50 O
ATOM 13 C1' C B 25 -62.485 120.640 110.033 1.00 19.50 C
ATOM 14 N1 C B 25 -63.779 121.236 110.363 1.00 17.36 N
ATOM 15 C2 C B 25 -64.535 120.665 111.400 1.00 17.36 C
ATOM 16 O2 C B 25 -64.026 119.772 112.090 1.00 17.36 O
ATOM 17 N3 C B 25 -65.792 121.111 111.624 1.00 17.36 N
ATOM 18 C4 C B 25 -66.288 122.105 110.881 1.00 17.36 C
ATOM 19 N4 C B 25 -67.551 122.480 111.095 1.00 17.36 N
ATOM 20 C5 C B 25 -65.511 122.754 109.872 1.00 17.36 C
ATOM 21 C6 C B 25 -64.272 122.293 109.650 1.00 17.36 C
ATOM 22 P G B 26 -63.211 118.792 105.570 1.00 71.75 P
ATOM 23 OP1 G B 26 -62.423 118.184 104.465 1.00 56.86 O
ATOM 24 OP2 G B 26 -64.099 119.955 105.287 1.00 56.86 O
ATOM 25 O5' G B 26 -64.098 117.651 106.239 1.00 36.55 O
TER
Atoms:
OP1: (-62.423,118.184,104.465)
OP2: (-64.099,119.955,105.287)
C3': (-65.653,115.457,107.681)
C1': (-65.624,117.034,109.452)
C5': (-63.495,116.431,106.708)
O6: (-69.416,121.540,108.301)
O4': (-64.352,117.046,108.845)
C8: (-65.855,119.169,108.126)
C2: (-69.550,118.676,110.406)
C6: (-69.032,120.498,108.853)
C5: (-67.796,119.824,108.696)
C4: (-67.572,118.667,109.409)
P: (-63.211,118.792,105.570)
C4': (-64.228,115.932,107.925)
C2': (-66.326,115.746,109.017)
O2': (-66.048,114.754,109.981)
N1: (-69.866,119.835,109.749)
N2: (-70.499,118.182,111.206)
N3: (-68.394,118.043,110.280)
N7: (-66.708,120.127,107.893)
N9: (-66.319,118.241,109.023)
O5': (-64.098,117.651,106.239)
O3': (-65.670,114.058,107.359)
OP2: (-64.099,119.955,105.287)
C3': (-65.653,115.457,107.681)
C1': (-65.624,117.034,109.452)
C5': (-63.495,116.431,106.708)
O6: (-69.416,121.540,108.301)
O4': (-64.352,117.046,108.845)
C8: (-65.855,119.169,108.126)
C2: (-69.550,118.676,110.406)
C6: (-69.032,120.498,108.853)
C5: (-67.796,119.824,108.696)
C4: (-67.572,118.667,109.409)
P: (-63.211,118.792,105.570)
C4': (-64.228,115.932,107.925)
C2': (-66.326,115.746,109.017)
O2': (-66.048,114.754,109.981)
N1: (-69.866,119.835,109.749)
N2: (-70.499,118.182,111.206)
N3: (-68.394,118.043,110.280)
N7: (-66.708,120.127,107.893)
N9: (-66.319,118.241,109.023)
O5': (-64.098,117.651,106.239)
O3': (-65.670,114.058,107.359)
C2: (-64.535,120.665,111.400)
OP1: (-61.911,124.151,104.822)
OP2: (-64.107,124.693,106.029)
C4: (-66.288,122.105,110.881)
O5': (-62.544,122.999,106.957)
C3': (-62.513,120.136,107.724)
C1': (-62.485,120.640,110.033)
O4': (-61.691,121.597,109.360)
C5': (-61.284,122.318,107.086)
P: (-62.665,124.331,106.083)
O2: (-64.026,119.772,112.090)
C4': (-61.407,121.137,108.019)
C2': (-62.714,119.472,109.081)
O2': (-61.769,118.461,109.363)
N1: (-63.779,121.236,110.363)
N3: (-65.792,121.111,111.624)
N4: (-67.551,122.480,111.095)
C6: (-64.272,122.293,109.650)
C5: (-65.511,122.754,109.872)
O3': (-62.146,119.195,106.712)
OP1: (-61.911,124.151,104.822)
OP2: (-64.107,124.693,106.029)
C4: (-66.288,122.105,110.881)
O5': (-62.544,122.999,106.957)
C3': (-62.513,120.136,107.724)
C1': (-62.485,120.640,110.033)
O4': (-61.691,121.597,109.360)
C5': (-61.284,122.318,107.086)
P: (-62.665,124.331,106.083)
O2: (-64.026,119.772,112.090)
C4': (-61.407,121.137,108.019)
C2': (-62.714,119.472,109.081)
O2': (-61.769,118.461,109.363)
N1: (-63.779,121.236,110.363)
N3: (-65.792,121.111,111.624)
N4: (-67.551,122.480,111.095)
C6: (-64.272,122.293,109.650)
C5: (-65.511,122.754,109.872)
O3': (-62.146,119.195,106.712)
Image (generated by PyMOL):