Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:9110:9111
Extra
PDB:
ATOM 1 O3' G A 109 44.259 36.708 122.874 1.00 71.85 O
ATOM 2 P U A 110 45.384 35.782 122.221 1.00 72.39 P
ATOM 3 OP1 U A 110 44.886 34.384 122.207 1.00 72.62 O
ATOM 4 OP2 U A 110 46.670 36.104 122.906 1.00 70.81 O
ATOM 5 O5' U A 110 45.434 36.293 120.713 1.00 70.92 O
ATOM 6 C5' U A 110 44.218 36.473 119.960 1.00 68.49 C
ATOM 7 C4' U A 110 44.512 37.142 118.640 1.00 67.32 C
ATOM 8 O4' U A 110 44.926 38.517 118.841 1.00 67.32 O
ATOM 9 C3' U A 110 45.647 36.518 117.858 1.00 65.44 C
ATOM 10 O3' U A 110 45.167 35.401 117.138 1.00 64.26 O
ATOM 11 C2' U A 110 46.088 37.658 116.951 1.00 65.62 C
ATOM 12 O2' U A 110 45.241 37.817 115.832 1.00 65.34 O
ATOM 13 C1' U A 110 45.902 38.866 117.872 1.00 66.08 C
ATOM 14 N1 U A 110 47.115 39.331 118.568 1.00 65.83 N
ATOM 15 C2 U A 110 48.073 40.018 117.830 1.00 66.48 C
ATOM 16 O2 U A 110 47.988 40.195 116.622 1.00 67.71 O
ATOM 17 N3 U A 110 49.140 40.485 118.558 1.00 65.79 N
ATOM 18 C4 U A 110 49.354 40.330 119.911 1.00 65.40 C
ATOM 19 O4 U A 110 50.311 40.897 120.441 1.00 65.30 O
ATOM 20 C5 U A 110 48.348 39.577 120.590 1.00 65.76 C
ATOM 21 C6 U A 110 47.291 39.116 119.915 1.00 64.86 C
ATOM 22 P U A 111 46.122 34.142 116.901 1.00 64.53 P
ATOM 23 OP1 U A 111 45.388 33.207 116.000 1.00 62.58 O
ATOM 24 OP2 U A 111 46.618 33.672 118.221 1.00 63.44 O
ATOM 25 O5' U A 111 47.360 34.750 116.107 1.00 64.25 O
TER
ATOM 1 O3' U B 110 45.167 35.401 117.138 1.00 64.26 O
ATOM 2 P U B 111 46.122 34.142 116.901 1.00 64.53 P
ATOM 3 OP1 U B 111 45.388 33.207 116.000 1.00 62.58 O
ATOM 4 OP2 U B 111 46.618 33.672 118.221 1.00 63.44 O
ATOM 5 O5' U B 111 47.360 34.750 116.107 1.00 64.25 O
ATOM 6 C5' U B 111 47.193 35.314 114.793 1.00 61.30 C
ATOM 7 C4' U B 111 48.492 35.910 114.318 1.00 58.92 C
ATOM 8 O4' U B 111 48.833 37.057 115.133 1.00 59.00 O
ATOM 9 C3' U B 111 49.701 35.020 114.517 1.00 57.29 C
ATOM 10 O3' U B 111 49.766 34.017 113.515 1.00 55.42 O
ATOM 11 C2' U B 111 50.855 36.014 114.429 1.00 56.84 C
ATOM 12 O2' U B 111 51.210 36.304 113.097 1.00 55.97 O
ATOM 13 C1' U B 111 50.232 37.268 115.055 1.00 57.75 C
ATOM 14 N1 U B 111 50.742 37.636 116.385 1.00 58.57 N
ATOM 15 C2 U B 111 51.567 38.742 116.469 1.00 59.43 C
ATOM 16 O2 U B 111 51.854 39.428 115.508 1.00 60.84 O
ATOM 17 N3 U B 111 52.041 39.021 117.724 1.00 59.63 N
ATOM 18 C4 U B 111 51.778 38.328 118.882 1.00 59.41 C
ATOM 19 O4 U B 111 52.321 38.675 119.935 1.00 59.88 O
ATOM 20 C5 U B 111 50.901 37.212 118.718 1.00 59.12 C
ATOM 21 C6 U B 111 50.426 36.911 117.506 1.00 58.29 C
ATOM 22 P C B 112 50.182 32.524 113.921 1.00 54.48 P
ATOM 23 OP1 C B 112 50.094 31.682 112.704 1.00 54.36 O
ATOM 24 OP2 C B 112 49.411 32.151 115.132 1.00 55.26 O
ATOM 25 O5' C B 112 51.710 32.652 114.338 1.00 53.09 O
TER
ATOM 2 P U A 110 45.384 35.782 122.221 1.00 72.39 P
ATOM 3 OP1 U A 110 44.886 34.384 122.207 1.00 72.62 O
ATOM 4 OP2 U A 110 46.670 36.104 122.906 1.00 70.81 O
ATOM 5 O5' U A 110 45.434 36.293 120.713 1.00 70.92 O
ATOM 6 C5' U A 110 44.218 36.473 119.960 1.00 68.49 C
ATOM 7 C4' U A 110 44.512 37.142 118.640 1.00 67.32 C
ATOM 8 O4' U A 110 44.926 38.517 118.841 1.00 67.32 O
ATOM 9 C3' U A 110 45.647 36.518 117.858 1.00 65.44 C
ATOM 10 O3' U A 110 45.167 35.401 117.138 1.00 64.26 O
ATOM 11 C2' U A 110 46.088 37.658 116.951 1.00 65.62 C
ATOM 12 O2' U A 110 45.241 37.817 115.832 1.00 65.34 O
ATOM 13 C1' U A 110 45.902 38.866 117.872 1.00 66.08 C
ATOM 14 N1 U A 110 47.115 39.331 118.568 1.00 65.83 N
ATOM 15 C2 U A 110 48.073 40.018 117.830 1.00 66.48 C
ATOM 16 O2 U A 110 47.988 40.195 116.622 1.00 67.71 O
ATOM 17 N3 U A 110 49.140 40.485 118.558 1.00 65.79 N
ATOM 18 C4 U A 110 49.354 40.330 119.911 1.00 65.40 C
ATOM 19 O4 U A 110 50.311 40.897 120.441 1.00 65.30 O
ATOM 20 C5 U A 110 48.348 39.577 120.590 1.00 65.76 C
ATOM 21 C6 U A 110 47.291 39.116 119.915 1.00 64.86 C
ATOM 22 P U A 111 46.122 34.142 116.901 1.00 64.53 P
ATOM 23 OP1 U A 111 45.388 33.207 116.000 1.00 62.58 O
ATOM 24 OP2 U A 111 46.618 33.672 118.221 1.00 63.44 O
ATOM 25 O5' U A 111 47.360 34.750 116.107 1.00 64.25 O
TER
ATOM 1 O3' U B 110 45.167 35.401 117.138 1.00 64.26 O
ATOM 2 P U B 111 46.122 34.142 116.901 1.00 64.53 P
ATOM 3 OP1 U B 111 45.388 33.207 116.000 1.00 62.58 O
ATOM 4 OP2 U B 111 46.618 33.672 118.221 1.00 63.44 O
ATOM 5 O5' U B 111 47.360 34.750 116.107 1.00 64.25 O
ATOM 6 C5' U B 111 47.193 35.314 114.793 1.00 61.30 C
ATOM 7 C4' U B 111 48.492 35.910 114.318 1.00 58.92 C
ATOM 8 O4' U B 111 48.833 37.057 115.133 1.00 59.00 O
ATOM 9 C3' U B 111 49.701 35.020 114.517 1.00 57.29 C
ATOM 10 O3' U B 111 49.766 34.017 113.515 1.00 55.42 O
ATOM 11 C2' U B 111 50.855 36.014 114.429 1.00 56.84 C
ATOM 12 O2' U B 111 51.210 36.304 113.097 1.00 55.97 O
ATOM 13 C1' U B 111 50.232 37.268 115.055 1.00 57.75 C
ATOM 14 N1 U B 111 50.742 37.636 116.385 1.00 58.57 N
ATOM 15 C2 U B 111 51.567 38.742 116.469 1.00 59.43 C
ATOM 16 O2 U B 111 51.854 39.428 115.508 1.00 60.84 O
ATOM 17 N3 U B 111 52.041 39.021 117.724 1.00 59.63 N
ATOM 18 C4 U B 111 51.778 38.328 118.882 1.00 59.41 C
ATOM 19 O4 U B 111 52.321 38.675 119.935 1.00 59.88 O
ATOM 20 C5 U B 111 50.901 37.212 118.718 1.00 59.12 C
ATOM 21 C6 U B 111 50.426 36.911 117.506 1.00 58.29 C
ATOM 22 P C B 112 50.182 32.524 113.921 1.00 54.48 P
ATOM 23 OP1 C B 112 50.094 31.682 112.704 1.00 54.36 O
ATOM 24 OP2 C B 112 49.411 32.151 115.132 1.00 55.26 O
ATOM 25 O5' C B 112 51.710 32.652 114.338 1.00 53.09 O
TER
Atoms:
C4: (49.354,40.330,119.911)
N3: (49.140,40.485,118.558)
OP1: (44.886,34.384,122.207)
OP2: (46.670,36.104,122.906)
C2: (48.073,40.018,117.830)
C1': (45.902,38.866,117.872)
C3': (45.647,36.518,117.858)
O5': (45.434,36.293,120.713)
O4': (44.926,38.517,118.841)
C5': (44.218,36.473,119.960)
P: (45.384,35.782,122.221)
C4': (44.512,37.142,118.640)
C2': (46.088,37.658,116.951)
O2': (45.241,37.817,115.832)
N1: (47.115,39.331,118.568)
O4: (50.311,40.897,120.441)
O2: (47.988,40.195,116.622)
C6: (47.291,39.116,119.915)
C5: (48.348,39.577,120.590)
O3': (45.167,35.401,117.138)
N3: (49.140,40.485,118.558)
OP1: (44.886,34.384,122.207)
OP2: (46.670,36.104,122.906)
C2: (48.073,40.018,117.830)
C1': (45.902,38.866,117.872)
C3': (45.647,36.518,117.858)
O5': (45.434,36.293,120.713)
O4': (44.926,38.517,118.841)
C5': (44.218,36.473,119.960)
P: (45.384,35.782,122.221)
C4': (44.512,37.142,118.640)
C2': (46.088,37.658,116.951)
O2': (45.241,37.817,115.832)
N1: (47.115,39.331,118.568)
O4: (50.311,40.897,120.441)
O2: (47.988,40.195,116.622)
C6: (47.291,39.116,119.915)
C5: (48.348,39.577,120.590)
O3': (45.167,35.401,117.138)
C4: (51.778,38.328,118.882)
N3: (52.041,39.021,117.724)
OP1: (45.388,33.207,116.000)
OP2: (46.618,33.672,118.221)
C2: (51.567,38.742,116.469)
C1': (50.232,37.268,115.055)
C3': (49.701,35.020,114.517)
O5': (47.360,34.750,116.107)
O4': (48.833,37.057,115.133)
C5': (47.193,35.314,114.793)
P: (46.122,34.142,116.901)
C4': (48.492,35.910,114.318)
C2': (50.855,36.014,114.429)
O2': (51.210,36.304,113.097)
N1: (50.742,37.636,116.385)
O4: (52.321,38.675,119.935)
O2: (51.854,39.428,115.508)
C6: (50.426,36.911,117.506)
C5: (50.901,37.212,118.718)
O3': (49.766,34.017,113.515)
N3: (52.041,39.021,117.724)
OP1: (45.388,33.207,116.000)
OP2: (46.618,33.672,118.221)
C2: (51.567,38.742,116.469)
C1': (50.232,37.268,115.055)
C3': (49.701,35.020,114.517)
O5': (47.360,34.750,116.107)
O4': (48.833,37.057,115.133)
C5': (47.193,35.314,114.793)
P: (46.122,34.142,116.901)
C4': (48.492,35.910,114.318)
C2': (50.855,36.014,114.429)
O2': (51.210,36.304,113.097)
N1: (50.742,37.636,116.385)
O4: (52.321,38.675,119.935)
O2: (51.854,39.428,115.508)
C6: (50.426,36.911,117.506)
C5: (50.901,37.212,118.718)
O3': (49.766,34.017,113.515)
Image (generated by PyMOL):