Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1248:A1247
Extra
PDB:
ATOM 1 O3' C A1247 -30.435 -50.524 -2.932 1.00 14.52 O
ATOM 2 P G A1248 -30.160 -49.206 -3.805 1.00 3.32 P
ATOM 3 OP1 G A1248 -31.118 -48.226 -3.291 1.00 3.32 O
ATOM 4 OP2 G A1248 -30.150 -49.506 -5.248 1.00 3.32 O
ATOM 5 O5' G A1248 -28.694 -48.770 -3.383 1.00 18.59 O
ATOM 6 C5' G A1248 -28.420 -48.341 -2.044 1.00 18.59 C
ATOM 7 C4' G A1248 -26.939 -48.395 -1.780 1.00 18.59 C
ATOM 8 O4' G A1248 -26.500 -49.773 -1.792 1.00 18.59 O
ATOM 9 C3' G A1248 -26.100 -47.696 -2.834 1.00 18.59 C
ATOM 10 O3' G A1248 -25.939 -46.323 -2.515 1.00 18.59 O
ATOM 11 C2' G A1248 -24.785 -48.460 -2.758 1.00 18.59 C
ATOM 12 O2' G A1248 -23.997 -48.066 -1.653 1.00 18.59 O
ATOM 13 C1' G A1248 -25.271 -49.879 -2.485 1.00 18.59 C
ATOM 14 N9 G A1248 -25.527 -50.615 -3.718 1.00 20.01 N
ATOM 15 C8 G A1248 -26.742 -50.745 -4.340 1.00 20.01 C
ATOM 16 N7 G A1248 -26.695 -51.487 -5.404 1.00 20.01 N
ATOM 17 C5 G A1248 -25.368 -51.863 -5.500 1.00 20.01 C
ATOM 18 C6 G A1248 -24.734 -52.676 -6.450 1.00 20.01 C
ATOM 19 O6 G A1248 -25.249 -53.269 -7.423 1.00 20.01 O
ATOM 20 N1 G A1248 -23.369 -52.789 -6.190 1.00 20.01 N
ATOM 21 C2 G A1248 -22.719 -52.202 -5.136 1.00 20.01 C
ATOM 22 N2 G A1248 -21.406 -52.429 -5.059 1.00 20.01 N
ATOM 23 N3 G A1248 -23.314 -51.449 -4.230 1.00 20.01 N
ATOM 24 C4 G A1248 -24.629 -51.322 -4.473 1.00 20.01 C
ATOM 25 P U A1249 -27.029 -45.252 -3.014 1.00 35.79 P
ATOM 26 OP1 U A1249 -28.035 -45.913 -3.896 1.00 43.72 O
ATOM 27 OP2 U A1249 -26.236 -44.098 -3.532 1.00 43.72 O
ATOM 28 O5' U A1249 -27.786 -44.845 -1.670 1.00 33.89 O
TER
ATOM 1 O3' C B1246 -31.625 -55.088 -7.970 1.00 14.09 O
ATOM 2 P C B1247 -31.018 -53.607 -7.689 1.00 5.72 P
ATOM 3 OP1 C B1247 -31.926 -52.608 -8.305 1.00 32.52 O
ATOM 4 OP2 C B1247 -29.561 -53.548 -7.995 1.00 32.52 O
ATOM 5 O5' C B1247 -31.233 -53.502 -6.120 1.00 14.52 O
ATOM 6 C5' C B1247 -30.765 -52.383 -5.413 1.00 14.52 C
ATOM 7 C4' C B1247 -30.695 -52.685 -3.946 1.00 14.52 C
ATOM 8 O4' C B1247 -30.122 -53.999 -3.728 1.00 14.52 O
ATOM 9 C3' C B1247 -29.757 -51.721 -3.256 1.00 14.52 C
ATOM 10 O3' C B1247 -30.435 -50.524 -2.932 1.00 14.52 O
ATOM 11 C2' C B1247 -29.250 -52.523 -2.069 1.00 14.52 C
ATOM 12 O2' C B1247 -30.121 -52.497 -0.963 1.00 14.52 O
ATOM 13 C1' C B1247 -29.190 -53.938 -2.658 1.00 14.52 C
ATOM 14 N1 C B1247 -27.853 -54.275 -3.190 1.00 18.44 N
ATOM 15 C2 C B1247 -26.728 -53.985 -2.422 1.00 18.44 C
ATOM 16 O2 C B1247 -26.878 -53.491 -1.309 1.00 18.44 O
ATOM 17 N3 C B1247 -25.509 -54.253 -2.905 1.00 18.44 N
ATOM 18 C4 C B1247 -25.383 -54.809 -4.102 1.00 18.44 C
ATOM 19 N4 C B1247 -24.155 -55.055 -4.539 1.00 18.44 N
ATOM 20 C5 C B1247 -26.509 -55.137 -4.906 1.00 18.44 C
ATOM 21 C6 C B1247 -27.713 -54.852 -4.417 1.00 18.44 C
ATOM 22 P G B1248 -30.160 -49.206 -3.805 1.00 3.32 P
ATOM 23 OP1 G B1248 -31.118 -48.226 -3.291 1.00 3.32 O
ATOM 24 OP2 G B1248 -30.150 -49.506 -5.248 1.00 3.32 O
ATOM 25 O5' G B1248 -28.694 -48.770 -3.383 1.00 18.59 O
TER
ATOM 2 P G A1248 -30.160 -49.206 -3.805 1.00 3.32 P
ATOM 3 OP1 G A1248 -31.118 -48.226 -3.291 1.00 3.32 O
ATOM 4 OP2 G A1248 -30.150 -49.506 -5.248 1.00 3.32 O
ATOM 5 O5' G A1248 -28.694 -48.770 -3.383 1.00 18.59 O
ATOM 6 C5' G A1248 -28.420 -48.341 -2.044 1.00 18.59 C
ATOM 7 C4' G A1248 -26.939 -48.395 -1.780 1.00 18.59 C
ATOM 8 O4' G A1248 -26.500 -49.773 -1.792 1.00 18.59 O
ATOM 9 C3' G A1248 -26.100 -47.696 -2.834 1.00 18.59 C
ATOM 10 O3' G A1248 -25.939 -46.323 -2.515 1.00 18.59 O
ATOM 11 C2' G A1248 -24.785 -48.460 -2.758 1.00 18.59 C
ATOM 12 O2' G A1248 -23.997 -48.066 -1.653 1.00 18.59 O
ATOM 13 C1' G A1248 -25.271 -49.879 -2.485 1.00 18.59 C
ATOM 14 N9 G A1248 -25.527 -50.615 -3.718 1.00 20.01 N
ATOM 15 C8 G A1248 -26.742 -50.745 -4.340 1.00 20.01 C
ATOM 16 N7 G A1248 -26.695 -51.487 -5.404 1.00 20.01 N
ATOM 17 C5 G A1248 -25.368 -51.863 -5.500 1.00 20.01 C
ATOM 18 C6 G A1248 -24.734 -52.676 -6.450 1.00 20.01 C
ATOM 19 O6 G A1248 -25.249 -53.269 -7.423 1.00 20.01 O
ATOM 20 N1 G A1248 -23.369 -52.789 -6.190 1.00 20.01 N
ATOM 21 C2 G A1248 -22.719 -52.202 -5.136 1.00 20.01 C
ATOM 22 N2 G A1248 -21.406 -52.429 -5.059 1.00 20.01 N
ATOM 23 N3 G A1248 -23.314 -51.449 -4.230 1.00 20.01 N
ATOM 24 C4 G A1248 -24.629 -51.322 -4.473 1.00 20.01 C
ATOM 25 P U A1249 -27.029 -45.252 -3.014 1.00 35.79 P
ATOM 26 OP1 U A1249 -28.035 -45.913 -3.896 1.00 43.72 O
ATOM 27 OP2 U A1249 -26.236 -44.098 -3.532 1.00 43.72 O
ATOM 28 O5' U A1249 -27.786 -44.845 -1.670 1.00 33.89 O
TER
ATOM 1 O3' C B1246 -31.625 -55.088 -7.970 1.00 14.09 O
ATOM 2 P C B1247 -31.018 -53.607 -7.689 1.00 5.72 P
ATOM 3 OP1 C B1247 -31.926 -52.608 -8.305 1.00 32.52 O
ATOM 4 OP2 C B1247 -29.561 -53.548 -7.995 1.00 32.52 O
ATOM 5 O5' C B1247 -31.233 -53.502 -6.120 1.00 14.52 O
ATOM 6 C5' C B1247 -30.765 -52.383 -5.413 1.00 14.52 C
ATOM 7 C4' C B1247 -30.695 -52.685 -3.946 1.00 14.52 C
ATOM 8 O4' C B1247 -30.122 -53.999 -3.728 1.00 14.52 O
ATOM 9 C3' C B1247 -29.757 -51.721 -3.256 1.00 14.52 C
ATOM 10 O3' C B1247 -30.435 -50.524 -2.932 1.00 14.52 O
ATOM 11 C2' C B1247 -29.250 -52.523 -2.069 1.00 14.52 C
ATOM 12 O2' C B1247 -30.121 -52.497 -0.963 1.00 14.52 O
ATOM 13 C1' C B1247 -29.190 -53.938 -2.658 1.00 14.52 C
ATOM 14 N1 C B1247 -27.853 -54.275 -3.190 1.00 18.44 N
ATOM 15 C2 C B1247 -26.728 -53.985 -2.422 1.00 18.44 C
ATOM 16 O2 C B1247 -26.878 -53.491 -1.309 1.00 18.44 O
ATOM 17 N3 C B1247 -25.509 -54.253 -2.905 1.00 18.44 N
ATOM 18 C4 C B1247 -25.383 -54.809 -4.102 1.00 18.44 C
ATOM 19 N4 C B1247 -24.155 -55.055 -4.539 1.00 18.44 N
ATOM 20 C5 C B1247 -26.509 -55.137 -4.906 1.00 18.44 C
ATOM 21 C6 C B1247 -27.713 -54.852 -4.417 1.00 18.44 C
ATOM 22 P G B1248 -30.160 -49.206 -3.805 1.00 3.32 P
ATOM 23 OP1 G B1248 -31.118 -48.226 -3.291 1.00 3.32 O
ATOM 24 OP2 G B1248 -30.150 -49.506 -5.248 1.00 3.32 O
ATOM 25 O5' G B1248 -28.694 -48.770 -3.383 1.00 18.59 O
TER
Atoms:
OP1: (-31.118,-48.226,-3.291)
OP2: (-30.150,-49.506,-5.248)
C3': (-26.100,-47.696,-2.834)
C1': (-25.271,-49.879,-2.485)
C5': (-28.420,-48.341,-2.044)
O6: (-25.249,-53.269,-7.423)
O4': (-26.500,-49.773,-1.792)
C8: (-26.742,-50.745,-4.340)
C2: (-22.719,-52.202,-5.136)
C6: (-24.734,-52.676,-6.450)
C5: (-25.368,-51.863,-5.500)
C4: (-24.629,-51.322,-4.473)
P: (-30.160,-49.206,-3.805)
C4': (-26.939,-48.395,-1.780)
C2': (-24.785,-48.460,-2.758)
O2': (-23.997,-48.066,-1.653)
N1: (-23.369,-52.789,-6.190)
N2: (-21.406,-52.429,-5.059)
N3: (-23.314,-51.449,-4.230)
N7: (-26.695,-51.487,-5.404)
N9: (-25.527,-50.615,-3.718)
O5': (-28.694,-48.770,-3.383)
O3': (-25.939,-46.323,-2.515)
OP2: (-30.150,-49.506,-5.248)
C3': (-26.100,-47.696,-2.834)
C1': (-25.271,-49.879,-2.485)
C5': (-28.420,-48.341,-2.044)
O6: (-25.249,-53.269,-7.423)
O4': (-26.500,-49.773,-1.792)
C8: (-26.742,-50.745,-4.340)
C2: (-22.719,-52.202,-5.136)
C6: (-24.734,-52.676,-6.450)
C5: (-25.368,-51.863,-5.500)
C4: (-24.629,-51.322,-4.473)
P: (-30.160,-49.206,-3.805)
C4': (-26.939,-48.395,-1.780)
C2': (-24.785,-48.460,-2.758)
O2': (-23.997,-48.066,-1.653)
N1: (-23.369,-52.789,-6.190)
N2: (-21.406,-52.429,-5.059)
N3: (-23.314,-51.449,-4.230)
N7: (-26.695,-51.487,-5.404)
N9: (-25.527,-50.615,-3.718)
O5': (-28.694,-48.770,-3.383)
O3': (-25.939,-46.323,-2.515)
C2: (-26.728,-53.985,-2.422)
OP1: (-31.926,-52.608,-8.305)
OP2: (-29.561,-53.548,-7.995)
C4: (-25.383,-54.809,-4.102)
O5': (-31.233,-53.502,-6.120)
C3': (-29.757,-51.721,-3.256)
C1': (-29.190,-53.938,-2.658)
O4': (-30.122,-53.999,-3.728)
C5': (-30.765,-52.383,-5.413)
P: (-31.018,-53.607,-7.689)
O2: (-26.878,-53.491,-1.309)
C4': (-30.695,-52.685,-3.946)
C2': (-29.250,-52.523,-2.069)
O2': (-30.121,-52.497,-0.963)
N1: (-27.853,-54.275,-3.190)
N3: (-25.509,-54.253,-2.905)
N4: (-24.155,-55.055,-4.539)
C6: (-27.713,-54.852,-4.417)
C5: (-26.509,-55.137,-4.906)
O3': (-30.435,-50.524,-2.932)
OP1: (-31.926,-52.608,-8.305)
OP2: (-29.561,-53.548,-7.995)
C4: (-25.383,-54.809,-4.102)
O5': (-31.233,-53.502,-6.120)
C3': (-29.757,-51.721,-3.256)
C1': (-29.190,-53.938,-2.658)
O4': (-30.122,-53.999,-3.728)
C5': (-30.765,-52.383,-5.413)
P: (-31.018,-53.607,-7.689)
O2: (-26.878,-53.491,-1.309)
C4': (-30.695,-52.685,-3.946)
C2': (-29.250,-52.523,-2.069)
O2': (-30.121,-52.497,-0.963)
N1: (-27.853,-54.275,-3.190)
N3: (-25.509,-54.253,-2.905)
N4: (-24.155,-55.055,-4.539)
C6: (-27.713,-54.852,-4.417)
C5: (-26.509,-55.137,-4.906)
O3': (-30.435,-50.524,-2.932)
Image (generated by PyMOL):