ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2RE8:B35:B36

Extra

PDB:
ATOM 1 O3' A A 34 23.166 -0.949 21.478 1.00 57.96 O
ATOM 2 P U A 35 22.000 0.156 21.381 1.00 61.66 P
ATOM 3 OP1 U A 35 22.645 1.490 21.434 1.00 64.18 O
ATOM 4 OP2 U A 35 20.960 -0.198 22.377 1.00 68.99 O
ATOM 5 O5' U A 35 21.385 -0.034 19.926 1.00 54.09 O
ATOM 6 C5' U A 35 22.087 0.407 18.772 1.00 52.39 C
ATOM 7 C4' U A 35 21.328 0.027 17.524 1.00 48.11 C
ATOM 8 O4' U A 35 21.128 -1.410 17.515 1.00 52.04 O
ATOM 9 C3' U A 35 19.918 0.582 17.424 1.00 45.87 C
ATOM 10 O3' U A 35 19.912 1.896 16.893 1.00 49.24 O
ATOM 11 C2' U A 35 19.253 -0.392 16.463 1.00 44.53 C
ATOM 12 O2' U A 35 19.552 -0.125 15.114 1.00 44.20 O
ATOM 13 C1' U A 35 19.888 -1.714 16.890 1.00 48.96 C
ATOM 14 N1 U A 35 19.045 -2.446 17.846 1.00 49.42 N
ATOM 15 C2 U A 35 17.879 -3.007 17.362 1.00 49.73 C
ATOM 16 O2 U A 35 17.551 -2.940 16.192 1.00 47.61 O
ATOM 17 N3 U A 35 17.112 -3.653 18.298 1.00 53.97 N
ATOM 18 C4 U A 35 17.389 -3.805 19.638 1.00 53.62 C
ATOM 19 O4 U A 35 16.592 -4.413 20.349 1.00 53.92 O
ATOM 20 C5 U A 35 18.623 -3.210 20.066 1.00 50.45 C
ATOM 21 C6 U A 35 19.391 -2.566 19.176 1.00 50.83 C
ATOM 22 P U A 36 18.785 2.932 17.371 1.00 55.27 P
ATOM 23 OP1 U A 36 18.954 4.173 16.575 1.00 56.56 O
ATOM 24 OP2 U A 36 18.828 2.995 18.856 1.00 51.02 O
ATOM 25 O5' U A 36 17.417 2.236 16.938 1.00 57.61 O
TER

ATOM 1 O3' U B 35 19.912 1.896 16.893 1.00 49.24 O
ATOM 2 P U B 36 18.785 2.932 17.371 1.00 55.27 P
ATOM 3 OP1 U B 36 18.954 4.173 16.575 1.00 56.56 O
ATOM 4 OP2 U B 36 18.828 2.995 18.856 1.00 51.02 O
ATOM 5 O5' U B 36 17.417 2.236 16.938 1.00 57.61 O
ATOM 6 C5' U B 36 17.074 2.066 15.562 1.00 63.04 C
ATOM 7 C4' U B 36 15.727 1.389 15.443 1.00 66.82 C
ATOM 8 O4' U B 36 15.825 0.015 15.904 1.00 59.77 O
ATOM 9 C3' U B 36 14.644 1.998 16.314 1.00 72.42 C
ATOM 10 O3' U B 36 14.042 3.108 15.670 1.00 81.76 O
ATOM 11 C2' U B 36 13.683 0.835 16.491 1.00 67.58 C
ATOM 12 O2' U B 36 12.869 0.626 15.357 1.00 70.78 O
ATOM 13 C1' U B 36 14.662 -0.327 16.644 1.00 62.03 C
ATOM 14 N1 U B 36 15.060 -0.560 18.042 1.00 57.01 N
ATOM 15 C2 U B 36 14.159 -1.208 18.874 1.00 61.59 C
ATOM 16 O2 U B 36 13.064 -1.585 18.495 1.00 67.87 O
ATOM 17 N3 U B 36 14.592 -1.398 20.165 1.00 59.57 N
ATOM 18 C4 U B 36 15.807 -1.018 20.701 1.00 56.34 C
ATOM 19 O4 U B 36 16.072 -1.312 21.868 1.00 62.33 O
ATOM 20 C5 U B 36 16.681 -0.350 19.783 1.00 56.25 C
ATOM 21 C6 U B 36 16.289 -0.149 18.517 1.00 55.07 C
ATOM 22 P C B 37 13.499 4.333 16.552 1.00 83.42 P
ATOM 23 OP1 C B 37 13.045 5.394 15.621 1.00 84.60 O
ATOM 24 OP2 C B 37 14.533 4.644 17.573 1.00 78.08 O
ATOM 25 O5' C B 37 12.230 3.720 17.294 1.00 84.39 O
TER

Atoms:
C4: (17.389,-3.805,19.638)
N3: (17.112,-3.653,18.298)
OP1: (22.645,1.490,21.434)
OP2: (20.960,-0.198,22.377)
C2: (17.879,-3.007,17.362)
C1': (19.888,-1.714,16.890)
C3': (19.918,0.582,17.424)
O5': (21.385,-0.034,19.926)
O4': (21.128,-1.410,17.515)
C5': (22.087,0.407,18.772)
P: (22.000,0.156,21.381)
C4': (21.328,0.027,17.524)
C2': (19.253,-0.392,16.463)
O2': (19.552,-0.125,15.114)
N1: (19.045,-2.446,17.846)
O4: (16.592,-4.413,20.349)
O2: (17.551,-2.940,16.192)
C6: (19.391,-2.566,19.176)
C5: (18.623,-3.210,20.066)
O3': (19.912,1.896,16.893)
C4: (15.807,-1.018,20.701)
N3: (14.592,-1.398,20.165)
OP1: (18.954,4.173,16.575)
OP2: (18.828,2.995,18.856)
C2: (14.159,-1.208,18.874)
C1': (14.662,-0.327,16.644)
C3': (14.644,1.998,16.314)
O5': (17.417,2.236,16.938)
O4': (15.825,0.015,15.904)
C5': (17.074,2.066,15.562)
P: (18.785,2.932,17.371)
C4': (15.727,1.389,15.443)
C2': (13.683,0.835,16.491)
O2': (12.869,0.626,15.357)
N1: (15.060,-0.560,18.042)
O4: (16.072,-1.312,21.868)
O2: (13.064,-1.585,18.495)
C6: (16.289,-0.149,18.517)
C5: (16.681,-0.350,19.783)
O3': (14.042,3.108,15.670)
Image (generated by PyMOL):
PyMOL image
show in jmol