Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2127:A2373
Extra
PDB:
ATOM 1 O3' U A2126 -106.375 -51.071 19.013 1.00 20.28 O
ATOM 2 P G A2127 -107.652 -51.655 18.238 1.00 10.89 P
ATOM 3 OP1 G A2127 -108.105 -50.584 17.319 1.00 30.88 O
ATOM 4 OP2 G A2127 -108.604 -52.256 19.203 1.00 30.88 O
ATOM 5 O5' G A2127 -107.077 -52.836 17.353 1.00 18.10 O
ATOM 6 C5' G A2127 -106.432 -52.547 16.113 1.00 18.10 C
ATOM 7 C4' G A2127 -105.478 -53.647 15.774 1.00 18.10 C
ATOM 8 O4' G A2127 -106.237 -54.866 15.599 1.00 18.10 O
ATOM 9 C3' G A2127 -104.660 -53.435 14.517 1.00 18.10 C
ATOM 10 O3' G A2127 -103.333 -53.833 14.805 1.00 18.10 O
ATOM 11 C2' G A2127 -105.368 -54.296 13.462 1.00 18.10 C
ATOM 12 O2' G A2127 -104.461 -54.840 12.504 1.00 18.10 O
ATOM 13 C1' G A2127 -106.022 -55.400 14.304 1.00 18.10 C
ATOM 14 N9 G A2127 -107.319 -55.864 13.798 1.00 16.80 N
ATOM 15 C8 G A2127 -107.548 -56.784 12.805 1.00 16.80 C
ATOM 16 N7 G A2127 -108.820 -56.974 12.563 1.00 16.80 N
ATOM 17 C5 G A2127 -109.467 -56.132 13.449 1.00 16.80 C
ATOM 18 C6 G A2127 -110.854 -55.891 13.649 1.00 16.80 C
ATOM 19 O6 G A2127 -111.831 -56.388 13.065 1.00 16.80 O
ATOM 20 N1 G A2127 -111.064 -54.960 14.652 1.00 16.80 N
ATOM 21 C2 G A2127 -110.077 -54.347 15.376 1.00 16.80 C
ATOM 22 N2 G A2127 -110.484 -53.480 16.305 1.00 16.80 N
ATOM 23 N3 G A2127 -108.791 -54.564 15.205 1.00 16.80 N
ATOM 24 C4 G A2127 -108.558 -55.453 14.229 1.00 16.80 C
ATOM 25 P G A2128 -102.116 -53.176 13.996 1.00 37.60 P
ATOM 26 OP1 G A2128 -102.501 -51.801 13.591 1.00 31.74 O
ATOM 27 OP2 G A2128 -101.713 -54.176 12.946 1.00 31.74 O
ATOM 28 O5' G A2128 -100.960 -52.998 15.080 1.00 0.79 O
TER
ATOM 1 O3' G B2372 -106.209 -53.943 7.785 1.00 2.81 O
ATOM 2 P C B2373 -105.376 -54.467 9.054 1.00 16.09 P
ATOM 3 OP1 C B2373 -106.228 -54.188 10.244 1.00 25.64 O
ATOM 4 OP2 C B2373 -103.974 -53.957 9.007 1.00 25.64 O
ATOM 5 O5' C B2373 -105.354 -56.047 8.871 1.00 16.77 O
ATOM 6 C5' C B2373 -106.490 -56.833 9.259 1.00 16.77 C
ATOM 7 C4' C B2373 -106.206 -58.278 9.034 1.00 16.77 C
ATOM 8 O4' C B2373 -105.825 -58.432 7.646 1.00 16.77 O
ATOM 9 C3' C B2373 -105.037 -58.858 9.829 1.00 16.77 C
ATOM 10 O3' C B2373 -105.474 -59.323 11.116 1.00 16.77 O
ATOM 11 C2' C B2373 -104.577 -60.019 8.945 1.00 16.77 C
ATOM 12 O2' C B2373 -105.286 -61.225 9.190 1.00 16.77 O
ATOM 13 C1' C B2373 -104.923 -59.514 7.536 1.00 16.77 C
ATOM 14 N1 C B2373 -103.758 -59.099 6.762 1.00 7.61 N
ATOM 15 C2 C B2373 -103.092 -60.051 6.023 1.00 7.61 C
ATOM 16 O2 C B2373 -103.550 -61.191 5.983 1.00 7.61 O
ATOM 17 N3 C B2373 -101.971 -59.719 5.364 1.00 7.61 N
ATOM 18 C4 C B2373 -101.521 -58.468 5.416 1.00 7.61 C
ATOM 19 N4 C B2373 -100.369 -58.182 4.785 1.00 7.61 N
ATOM 20 C5 C B2373 -102.217 -57.454 6.126 1.00 7.61 C
ATOM 21 C6 C B2373 -103.320 -57.813 6.784 1.00 7.61 C
ATOM 22 P A B2374 -104.501 -59.212 12.403 1.00 3.77 P
ATOM 23 OP1 A B2374 -105.227 -59.791 13.557 1.00 8.89 O
ATOM 24 OP2 A B2374 -104.014 -57.814 12.491 1.00 8.89 O
ATOM 25 O5' A B2374 -103.255 -60.151 12.071 1.00 20.60 O
TER
ATOM 2 P G A2127 -107.652 -51.655 18.238 1.00 10.89 P
ATOM 3 OP1 G A2127 -108.105 -50.584 17.319 1.00 30.88 O
ATOM 4 OP2 G A2127 -108.604 -52.256 19.203 1.00 30.88 O
ATOM 5 O5' G A2127 -107.077 -52.836 17.353 1.00 18.10 O
ATOM 6 C5' G A2127 -106.432 -52.547 16.113 1.00 18.10 C
ATOM 7 C4' G A2127 -105.478 -53.647 15.774 1.00 18.10 C
ATOM 8 O4' G A2127 -106.237 -54.866 15.599 1.00 18.10 O
ATOM 9 C3' G A2127 -104.660 -53.435 14.517 1.00 18.10 C
ATOM 10 O3' G A2127 -103.333 -53.833 14.805 1.00 18.10 O
ATOM 11 C2' G A2127 -105.368 -54.296 13.462 1.00 18.10 C
ATOM 12 O2' G A2127 -104.461 -54.840 12.504 1.00 18.10 O
ATOM 13 C1' G A2127 -106.022 -55.400 14.304 1.00 18.10 C
ATOM 14 N9 G A2127 -107.319 -55.864 13.798 1.00 16.80 N
ATOM 15 C8 G A2127 -107.548 -56.784 12.805 1.00 16.80 C
ATOM 16 N7 G A2127 -108.820 -56.974 12.563 1.00 16.80 N
ATOM 17 C5 G A2127 -109.467 -56.132 13.449 1.00 16.80 C
ATOM 18 C6 G A2127 -110.854 -55.891 13.649 1.00 16.80 C
ATOM 19 O6 G A2127 -111.831 -56.388 13.065 1.00 16.80 O
ATOM 20 N1 G A2127 -111.064 -54.960 14.652 1.00 16.80 N
ATOM 21 C2 G A2127 -110.077 -54.347 15.376 1.00 16.80 C
ATOM 22 N2 G A2127 -110.484 -53.480 16.305 1.00 16.80 N
ATOM 23 N3 G A2127 -108.791 -54.564 15.205 1.00 16.80 N
ATOM 24 C4 G A2127 -108.558 -55.453 14.229 1.00 16.80 C
ATOM 25 P G A2128 -102.116 -53.176 13.996 1.00 37.60 P
ATOM 26 OP1 G A2128 -102.501 -51.801 13.591 1.00 31.74 O
ATOM 27 OP2 G A2128 -101.713 -54.176 12.946 1.00 31.74 O
ATOM 28 O5' G A2128 -100.960 -52.998 15.080 1.00 0.79 O
TER
ATOM 1 O3' G B2372 -106.209 -53.943 7.785 1.00 2.81 O
ATOM 2 P C B2373 -105.376 -54.467 9.054 1.00 16.09 P
ATOM 3 OP1 C B2373 -106.228 -54.188 10.244 1.00 25.64 O
ATOM 4 OP2 C B2373 -103.974 -53.957 9.007 1.00 25.64 O
ATOM 5 O5' C B2373 -105.354 -56.047 8.871 1.00 16.77 O
ATOM 6 C5' C B2373 -106.490 -56.833 9.259 1.00 16.77 C
ATOM 7 C4' C B2373 -106.206 -58.278 9.034 1.00 16.77 C
ATOM 8 O4' C B2373 -105.825 -58.432 7.646 1.00 16.77 O
ATOM 9 C3' C B2373 -105.037 -58.858 9.829 1.00 16.77 C
ATOM 10 O3' C B2373 -105.474 -59.323 11.116 1.00 16.77 O
ATOM 11 C2' C B2373 -104.577 -60.019 8.945 1.00 16.77 C
ATOM 12 O2' C B2373 -105.286 -61.225 9.190 1.00 16.77 O
ATOM 13 C1' C B2373 -104.923 -59.514 7.536 1.00 16.77 C
ATOM 14 N1 C B2373 -103.758 -59.099 6.762 1.00 7.61 N
ATOM 15 C2 C B2373 -103.092 -60.051 6.023 1.00 7.61 C
ATOM 16 O2 C B2373 -103.550 -61.191 5.983 1.00 7.61 O
ATOM 17 N3 C B2373 -101.971 -59.719 5.364 1.00 7.61 N
ATOM 18 C4 C B2373 -101.521 -58.468 5.416 1.00 7.61 C
ATOM 19 N4 C B2373 -100.369 -58.182 4.785 1.00 7.61 N
ATOM 20 C5 C B2373 -102.217 -57.454 6.126 1.00 7.61 C
ATOM 21 C6 C B2373 -103.320 -57.813 6.784 1.00 7.61 C
ATOM 22 P A B2374 -104.501 -59.212 12.403 1.00 3.77 P
ATOM 23 OP1 A B2374 -105.227 -59.791 13.557 1.00 8.89 O
ATOM 24 OP2 A B2374 -104.014 -57.814 12.491 1.00 8.89 O
ATOM 25 O5' A B2374 -103.255 -60.151 12.071 1.00 20.60 O
TER
Atoms:
OP1: (-108.105,-50.584,17.319)
OP2: (-108.604,-52.256,19.203)
C3': (-104.660,-53.435,14.517)
C1': (-106.022,-55.400,14.304)
C5': (-106.432,-52.547,16.113)
O6: (-111.831,-56.388,13.065)
O4': (-106.237,-54.866,15.599)
C8: (-107.548,-56.784,12.805)
C2: (-110.077,-54.347,15.376)
C6: (-110.854,-55.891,13.649)
C5: (-109.467,-56.132,13.449)
C4: (-108.558,-55.453,14.229)
P: (-107.652,-51.655,18.238)
C4': (-105.478,-53.647,15.774)
C2': (-105.368,-54.296,13.462)
O2': (-104.461,-54.840,12.504)
N1: (-111.064,-54.960,14.652)
N2: (-110.484,-53.480,16.305)
N3: (-108.791,-54.564,15.205)
N7: (-108.820,-56.974,12.563)
N9: (-107.319,-55.864,13.798)
O5': (-107.077,-52.836,17.353)
O3': (-103.333,-53.833,14.805)
OP2: (-108.604,-52.256,19.203)
C3': (-104.660,-53.435,14.517)
C1': (-106.022,-55.400,14.304)
C5': (-106.432,-52.547,16.113)
O6: (-111.831,-56.388,13.065)
O4': (-106.237,-54.866,15.599)
C8: (-107.548,-56.784,12.805)
C2: (-110.077,-54.347,15.376)
C6: (-110.854,-55.891,13.649)
C5: (-109.467,-56.132,13.449)
C4: (-108.558,-55.453,14.229)
P: (-107.652,-51.655,18.238)
C4': (-105.478,-53.647,15.774)
C2': (-105.368,-54.296,13.462)
O2': (-104.461,-54.840,12.504)
N1: (-111.064,-54.960,14.652)
N2: (-110.484,-53.480,16.305)
N3: (-108.791,-54.564,15.205)
N7: (-108.820,-56.974,12.563)
N9: (-107.319,-55.864,13.798)
O5': (-107.077,-52.836,17.353)
O3': (-103.333,-53.833,14.805)
C2: (-103.092,-60.051,6.023)
OP1: (-106.228,-54.188,10.244)
OP2: (-103.974,-53.957,9.007)
C4: (-101.521,-58.468,5.416)
O5': (-105.354,-56.047,8.871)
C3': (-105.037,-58.858,9.829)
C1': (-104.923,-59.514,7.536)
O4': (-105.825,-58.432,7.646)
C5': (-106.490,-56.833,9.259)
P: (-105.376,-54.467,9.054)
O2: (-103.550,-61.191,5.983)
C4': (-106.206,-58.278,9.034)
C2': (-104.577,-60.019,8.945)
O2': (-105.286,-61.225,9.190)
N1: (-103.758,-59.099,6.762)
N3: (-101.971,-59.719,5.364)
N4: (-100.369,-58.182,4.785)
C6: (-103.320,-57.813,6.784)
C5: (-102.217,-57.454,6.126)
O3': (-105.474,-59.323,11.116)
OP1: (-106.228,-54.188,10.244)
OP2: (-103.974,-53.957,9.007)
C4: (-101.521,-58.468,5.416)
O5': (-105.354,-56.047,8.871)
C3': (-105.037,-58.858,9.829)
C1': (-104.923,-59.514,7.536)
O4': (-105.825,-58.432,7.646)
C5': (-106.490,-56.833,9.259)
P: (-105.376,-54.467,9.054)
O2: (-103.550,-61.191,5.983)
C4': (-106.206,-58.278,9.034)
C2': (-104.577,-60.019,8.945)
O2': (-105.286,-61.225,9.190)
N1: (-103.758,-59.099,6.762)
N3: (-101.971,-59.719,5.364)
N4: (-100.369,-58.182,4.785)
C6: (-103.320,-57.813,6.784)
C5: (-102.217,-57.454,6.126)
O3': (-105.474,-59.323,11.116)
Image (generated by PyMOL):