Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:V10:V8
Extra
PDB:
ATOM 1 O3' G A 9 -117.080 -9.921 21.474 1.00 88.39 O
ATOM 2 P C A 10 -115.774 -9.726 22.395 1.00 90.88 P
ATOM 3 OP1 C A 10 -115.362 -11.078 22.849 1.00 90.88 O
ATOM 4 OP2 C A 10 -116.110 -8.700 23.418 1.00 90.88 O
ATOM 5 O5' C A 10 -114.691 -9.144 21.373 1.00 90.88 O
ATOM 6 C5' C A 10 -113.793 -10.003 20.682 1.00 90.88 C
ATOM 7 C4' C A 10 -112.652 -9.231 20.055 1.00 90.88 C
ATOM 8 O4' C A 10 -113.177 -8.209 19.159 1.00 90.88 O
ATOM 9 C3' C A 10 -111.753 -8.445 21.010 1.00 90.88 C
ATOM 10 O3' C A 10 -110.790 -9.246 21.685 1.00 90.88 O
ATOM 11 C2' C A 10 -111.152 -7.390 20.088 1.00 90.88 C
ATOM 12 O2' C A 10 -110.143 -7.948 19.248 1.00 90.88 O
ATOM 13 C1' C A 10 -112.371 -7.042 19.235 1.00 90.88 C
ATOM 14 N1 C A 10 -113.173 -5.974 19.861 1.00 89.82 N
ATOM 15 C2 C A 10 -112.862 -4.629 19.661 1.00 89.82 C
ATOM 16 O2 C A 10 -111.908 -4.320 18.929 1.00 89.82 O
ATOM 17 N3 C A 10 -113.626 -3.697 20.278 1.00 89.82 N
ATOM 18 C4 C A 10 -114.642 -4.077 21.062 1.00 89.82 C
ATOM 19 N4 C A 10 -115.385 -3.145 21.661 1.00 89.82 N
ATOM 20 C5 C A 10 -114.962 -5.439 21.281 1.00 89.82 C
ATOM 21 C6 C A 10 -114.204 -6.341 20.669 1.00 89.82 C
ATOM 22 P U A 11 -110.221 -8.793 23.128 1.00 70.28 P
ATOM 23 OP1 U A 11 -109.171 -9.774 23.502 1.00 70.28 O
ATOM 24 OP2 U A 11 -111.390 -8.618 24.040 1.00 70.28 O
ATOM 25 O5' U A 11 -109.560 -7.374 22.816 1.00 70.28 O
TER
ATOM 1 O3' U B 7 -117.703 -6.430 28.791 1.00 56.87 O
ATOM 2 P A B 8 -117.345 -6.346 27.219 1.00 73.91 P
ATOM 3 OP1 A B 8 -117.543 -7.707 26.653 1.00 73.91 O
ATOM 4 OP2 A B 8 -116.003 -5.715 27.109 1.00 73.91 O
ATOM 5 O5' A B 8 -118.456 -5.354 26.639 1.00 73.91 O
ATOM 6 C5' A B 8 -119.803 -5.787 26.443 1.00 73.91 C
ATOM 7 C4' A B 8 -120.418 -5.202 25.187 1.00 73.91 C
ATOM 8 O4' A B 8 -120.398 -3.751 25.267 1.00 73.91 O
ATOM 9 C3' A B 8 -119.718 -5.562 23.877 1.00 73.91 C
ATOM 10 O3' A B 8 -120.691 -5.718 22.843 1.00 73.91 O
ATOM 11 C2' A B 8 -118.870 -4.327 23.598 1.00 73.91 C
ATOM 12 O2' A B 8 -118.536 -4.133 22.244 1.00 73.91 O
ATOM 13 C1' A B 8 -119.779 -3.224 24.112 1.00 73.91 C
ATOM 14 N9 A B 8 -119.076 -2.000 24.488 1.00 74.08 N
ATOM 15 C8 A B 8 -117.743 -1.864 24.782 1.00 74.08 C
ATOM 16 N7 A B 8 -117.402 -0.635 25.089 1.00 74.08 N
ATOM 17 C5 A B 8 -118.583 0.092 24.990 1.00 74.08 C
ATOM 18 C6 A B 8 -118.884 1.454 25.192 1.00 74.08 C
ATOM 19 N6 A B 8 -117.994 2.380 25.555 1.00 74.08 N
ATOM 20 N1 A B 8 -120.159 1.842 25.009 1.00 74.08 N
ATOM 21 C2 A B 8 -121.060 0.924 24.647 1.00 74.08 C
ATOM 22 N3 A B 8 -120.899 -0.380 24.433 1.00 74.08 N
ATOM 23 C4 A B 8 -119.621 -0.741 24.619 1.00 74.08 C
ATOM 24 P G B 9 -121.399 -7.146 22.594 1.00 88.39 P
ATOM 25 OP1 G B 9 -122.825 -6.878 22.275 1.00 88.39 O
ATOM 26 OP2 G B 9 -121.079 -8.010 23.758 1.00 88.39 O
ATOM 27 O5' G B 9 -120.650 -7.683 21.301 1.00 88.39 O
TER
ATOM 2 P C A 10 -115.774 -9.726 22.395 1.00 90.88 P
ATOM 3 OP1 C A 10 -115.362 -11.078 22.849 1.00 90.88 O
ATOM 4 OP2 C A 10 -116.110 -8.700 23.418 1.00 90.88 O
ATOM 5 O5' C A 10 -114.691 -9.144 21.373 1.00 90.88 O
ATOM 6 C5' C A 10 -113.793 -10.003 20.682 1.00 90.88 C
ATOM 7 C4' C A 10 -112.652 -9.231 20.055 1.00 90.88 C
ATOM 8 O4' C A 10 -113.177 -8.209 19.159 1.00 90.88 O
ATOM 9 C3' C A 10 -111.753 -8.445 21.010 1.00 90.88 C
ATOM 10 O3' C A 10 -110.790 -9.246 21.685 1.00 90.88 O
ATOM 11 C2' C A 10 -111.152 -7.390 20.088 1.00 90.88 C
ATOM 12 O2' C A 10 -110.143 -7.948 19.248 1.00 90.88 O
ATOM 13 C1' C A 10 -112.371 -7.042 19.235 1.00 90.88 C
ATOM 14 N1 C A 10 -113.173 -5.974 19.861 1.00 89.82 N
ATOM 15 C2 C A 10 -112.862 -4.629 19.661 1.00 89.82 C
ATOM 16 O2 C A 10 -111.908 -4.320 18.929 1.00 89.82 O
ATOM 17 N3 C A 10 -113.626 -3.697 20.278 1.00 89.82 N
ATOM 18 C4 C A 10 -114.642 -4.077 21.062 1.00 89.82 C
ATOM 19 N4 C A 10 -115.385 -3.145 21.661 1.00 89.82 N
ATOM 20 C5 C A 10 -114.962 -5.439 21.281 1.00 89.82 C
ATOM 21 C6 C A 10 -114.204 -6.341 20.669 1.00 89.82 C
ATOM 22 P U A 11 -110.221 -8.793 23.128 1.00 70.28 P
ATOM 23 OP1 U A 11 -109.171 -9.774 23.502 1.00 70.28 O
ATOM 24 OP2 U A 11 -111.390 -8.618 24.040 1.00 70.28 O
ATOM 25 O5' U A 11 -109.560 -7.374 22.816 1.00 70.28 O
TER
ATOM 1 O3' U B 7 -117.703 -6.430 28.791 1.00 56.87 O
ATOM 2 P A B 8 -117.345 -6.346 27.219 1.00 73.91 P
ATOM 3 OP1 A B 8 -117.543 -7.707 26.653 1.00 73.91 O
ATOM 4 OP2 A B 8 -116.003 -5.715 27.109 1.00 73.91 O
ATOM 5 O5' A B 8 -118.456 -5.354 26.639 1.00 73.91 O
ATOM 6 C5' A B 8 -119.803 -5.787 26.443 1.00 73.91 C
ATOM 7 C4' A B 8 -120.418 -5.202 25.187 1.00 73.91 C
ATOM 8 O4' A B 8 -120.398 -3.751 25.267 1.00 73.91 O
ATOM 9 C3' A B 8 -119.718 -5.562 23.877 1.00 73.91 C
ATOM 10 O3' A B 8 -120.691 -5.718 22.843 1.00 73.91 O
ATOM 11 C2' A B 8 -118.870 -4.327 23.598 1.00 73.91 C
ATOM 12 O2' A B 8 -118.536 -4.133 22.244 1.00 73.91 O
ATOM 13 C1' A B 8 -119.779 -3.224 24.112 1.00 73.91 C
ATOM 14 N9 A B 8 -119.076 -2.000 24.488 1.00 74.08 N
ATOM 15 C8 A B 8 -117.743 -1.864 24.782 1.00 74.08 C
ATOM 16 N7 A B 8 -117.402 -0.635 25.089 1.00 74.08 N
ATOM 17 C5 A B 8 -118.583 0.092 24.990 1.00 74.08 C
ATOM 18 C6 A B 8 -118.884 1.454 25.192 1.00 74.08 C
ATOM 19 N6 A B 8 -117.994 2.380 25.555 1.00 74.08 N
ATOM 20 N1 A B 8 -120.159 1.842 25.009 1.00 74.08 N
ATOM 21 C2 A B 8 -121.060 0.924 24.647 1.00 74.08 C
ATOM 22 N3 A B 8 -120.899 -0.380 24.433 1.00 74.08 N
ATOM 23 C4 A B 8 -119.621 -0.741 24.619 1.00 74.08 C
ATOM 24 P G B 9 -121.399 -7.146 22.594 1.00 88.39 P
ATOM 25 OP1 G B 9 -122.825 -6.878 22.275 1.00 88.39 O
ATOM 26 OP2 G B 9 -121.079 -8.010 23.758 1.00 88.39 O
ATOM 27 O5' G B 9 -120.650 -7.683 21.301 1.00 88.39 O
TER
Atoms:
C2: (-112.862,-4.629,19.661)
OP1: (-115.362,-11.078,22.849)
OP2: (-116.110,-8.700,23.418)
C4: (-114.642,-4.077,21.062)
O5': (-114.691,-9.144,21.373)
C3': (-111.753,-8.445,21.010)
C1': (-112.371,-7.042,19.235)
O4': (-113.177,-8.209,19.159)
C5': (-113.793,-10.003,20.682)
P: (-115.774,-9.726,22.395)
O2: (-111.908,-4.320,18.929)
C4': (-112.652,-9.231,20.055)
C2': (-111.152,-7.390,20.088)
O2': (-110.143,-7.948,19.248)
N1: (-113.173,-5.974,19.861)
N3: (-113.626,-3.697,20.278)
N4: (-115.385,-3.145,21.661)
C6: (-114.204,-6.341,20.669)
C5: (-114.962,-5.439,21.281)
O3': (-110.790,-9.246,21.685)
OP1: (-115.362,-11.078,22.849)
OP2: (-116.110,-8.700,23.418)
C4: (-114.642,-4.077,21.062)
O5': (-114.691,-9.144,21.373)
C3': (-111.753,-8.445,21.010)
C1': (-112.371,-7.042,19.235)
O4': (-113.177,-8.209,19.159)
C5': (-113.793,-10.003,20.682)
P: (-115.774,-9.726,22.395)
O2: (-111.908,-4.320,18.929)
C4': (-112.652,-9.231,20.055)
C2': (-111.152,-7.390,20.088)
O2': (-110.143,-7.948,19.248)
N1: (-113.173,-5.974,19.861)
N3: (-113.626,-3.697,20.278)
N4: (-115.385,-3.145,21.661)
C6: (-114.204,-6.341,20.669)
C5: (-114.962,-5.439,21.281)
O3': (-110.790,-9.246,21.685)
OP1: (-117.543,-7.707,26.653)
OP2: (-116.003,-5.715,27.109)
C3': (-119.718,-5.562,23.877)
C1': (-119.779,-3.224,24.112)
C5': (-119.803,-5.787,26.443)
O4': (-120.398,-3.751,25.267)
C8: (-117.743,-1.864,24.782)
O2': (-118.536,-4.133,22.244)
C6: (-118.884,1.454,25.192)
C5: (-118.583,0.092,24.990)
C4: (-119.621,-0.741,24.619)
P: (-117.345,-6.346,27.219)
C4': (-120.418,-5.202,25.187)
C2': (-118.870,-4.327,23.598)
C2: (-121.060,0.924,24.647)
N1: (-120.159,1.842,25.009)
N3: (-120.899,-0.380,24.433)
N6: (-117.994,2.380,25.555)
N7: (-117.402,-0.635,25.089)
N9: (-119.076,-2.000,24.488)
O5': (-118.456,-5.354,26.639)
O3': (-120.691,-5.718,22.843)
OP2: (-116.003,-5.715,27.109)
C3': (-119.718,-5.562,23.877)
C1': (-119.779,-3.224,24.112)
C5': (-119.803,-5.787,26.443)
O4': (-120.398,-3.751,25.267)
C8: (-117.743,-1.864,24.782)
O2': (-118.536,-4.133,22.244)
C6: (-118.884,1.454,25.192)
C5: (-118.583,0.092,24.990)
C4: (-119.621,-0.741,24.619)
P: (-117.345,-6.346,27.219)
C4': (-120.418,-5.202,25.187)
C2': (-118.870,-4.327,23.598)
C2: (-121.060,0.924,24.647)
N1: (-120.159,1.842,25.009)
N3: (-120.899,-0.380,24.433)
N6: (-117.994,2.380,25.555)
N7: (-117.402,-0.635,25.089)
N9: (-119.076,-2.000,24.488)
O5': (-118.456,-5.354,26.639)
O3': (-120.691,-5.718,22.843)
Image (generated by PyMOL):