Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:V10:V8
Extra
PDB:
ATOM 1 O3' G A 9 -73.198 118.534 108.410 1.00 40.73 O
ATOM 2 P C A 10 -72.457 119.610 109.349 1.00 33.35 P
ATOM 3 OP1 C A 10 -72.340 119.008 110.696 1.00 33.35 O
ATOM 4 OP2 C A 10 -73.188 120.907 109.214 1.00 33.35 O
ATOM 5 O5' C A 10 -71.017 119.715 108.683 1.00 33.35 O
ATOM 6 C5' C A 10 -70.067 118.677 108.849 1.00 33.35 C
ATOM 7 C4' C A 10 -68.798 118.973 108.097 1.00 33.35 C
ATOM 8 O4' C A 10 -69.108 119.222 106.708 1.00 33.35 O
ATOM 9 C3' C A 10 -68.031 120.210 108.536 1.00 33.35 C
ATOM 10 O3' C A 10 -67.189 119.958 109.642 1.00 33.35 O
ATOM 11 C2' C A 10 -67.259 120.591 107.288 1.00 33.35 C
ATOM 12 O2' C A 10 -66.074 119.810 107.180 1.00 33.35 O
ATOM 13 C1' C A 10 -68.228 120.183 106.180 1.00 33.35 C
ATOM 14 N1 C A 10 -69.029 121.318 105.675 1.00 32.78 N
ATOM 15 C2 C A 10 -68.448 122.261 104.819 1.00 32.78 C
ATOM 16 O2 C A 10 -67.258 122.154 104.522 1.00 32.78 O
ATOM 17 N3 C A 10 -69.178 123.279 104.336 1.00 32.78 N
ATOM 18 C4 C A 10 -70.455 123.358 104.677 1.00 32.78 C
ATOM 19 N4 C A 10 -71.155 124.379 104.189 1.00 32.78 N
ATOM 20 C5 C A 10 -71.088 122.410 105.531 1.00 32.78 C
ATOM 21 C6 C A 10 -70.350 121.406 106.003 1.00 32.78 C
ATOM 22 P U A 11 -67.122 120.996 110.860 1.00 29.46 P
ATOM 23 OP1 U A 11 -66.387 120.318 111.964 1.00 29.46 O
ATOM 24 OP2 U A 11 -68.526 121.476 111.106 1.00 29.46 O
ATOM 25 O5' U A 11 -66.234 122.177 110.265 1.00 29.46 O
TER
ATOM 1 O3' U B 7 -75.567 126.640 110.903 1.00 28.77 O
ATOM 2 P A B 8 -74.898 125.852 109.659 1.00 42.98 P
ATOM 3 OP1 A B 8 -74.888 124.409 110.018 1.00 42.98 O
ATOM 4 OP2 A B 8 -73.607 126.516 109.355 1.00 42.98 O
ATOM 5 O5' A B 8 -75.921 126.112 108.467 1.00 42.98 O
ATOM 6 C5' A B 8 -77.091 125.311 108.321 1.00 42.98 C
ATOM 7 C4' A B 8 -77.177 124.674 106.953 1.00 42.98 C
ATOM 8 O4' A B 8 -77.012 125.704 105.928 1.00 42.98 O
ATOM 9 C3' A B 8 -76.111 123.606 106.657 1.00 42.98 C
ATOM 10 O3' A B 8 -76.677 122.543 105.891 1.00 42.98 O
ATOM 11 C2' A B 8 -75.120 124.362 105.784 1.00 42.98 C
ATOM 12 O2' A B 8 -74.339 123.550 104.933 1.00 42.98 O
ATOM 13 C1' A B 8 -76.065 125.246 104.992 1.00 42.98 C
ATOM 14 N9 A B 8 -75.412 126.374 104.329 1.00 43.56 N
ATOM 15 C8 A B 8 -74.056 126.602 104.320 1.00 43.56 C
ATOM 16 N7 A B 8 -73.675 127.630 103.606 1.00 43.56 N
ATOM 17 C5 A B 8 -74.867 128.086 103.079 1.00 43.56 C
ATOM 18 C6 A B 8 -75.124 129.157 102.222 1.00 43.56 C
ATOM 19 N6 A B 8 -74.143 129.937 101.767 1.00 43.56 N
ATOM 20 N1 A B 8 -76.412 129.378 101.856 1.00 43.56 N
ATOM 21 C2 A B 8 -77.358 128.551 102.338 1.00 43.56 C
ATOM 22 N3 A B 8 -77.239 127.496 103.157 1.00 43.56 N
ATOM 23 C4 A B 8 -75.948 127.316 103.491 1.00 43.56 C
ATOM 24 P G B 9 -77.364 121.286 106.610 1.00 40.73 P
ATOM 25 OP1 G B 9 -78.062 120.505 105.551 1.00 40.73 O
ATOM 26 OP2 G B 9 -78.151 121.826 107.749 1.00 40.73 O
ATOM 27 O5' G B 9 -76.130 120.451 107.153 1.00 40.73 O
TER
ATOM 2 P C A 10 -72.457 119.610 109.349 1.00 33.35 P
ATOM 3 OP1 C A 10 -72.340 119.008 110.696 1.00 33.35 O
ATOM 4 OP2 C A 10 -73.188 120.907 109.214 1.00 33.35 O
ATOM 5 O5' C A 10 -71.017 119.715 108.683 1.00 33.35 O
ATOM 6 C5' C A 10 -70.067 118.677 108.849 1.00 33.35 C
ATOM 7 C4' C A 10 -68.798 118.973 108.097 1.00 33.35 C
ATOM 8 O4' C A 10 -69.108 119.222 106.708 1.00 33.35 O
ATOM 9 C3' C A 10 -68.031 120.210 108.536 1.00 33.35 C
ATOM 10 O3' C A 10 -67.189 119.958 109.642 1.00 33.35 O
ATOM 11 C2' C A 10 -67.259 120.591 107.288 1.00 33.35 C
ATOM 12 O2' C A 10 -66.074 119.810 107.180 1.00 33.35 O
ATOM 13 C1' C A 10 -68.228 120.183 106.180 1.00 33.35 C
ATOM 14 N1 C A 10 -69.029 121.318 105.675 1.00 32.78 N
ATOM 15 C2 C A 10 -68.448 122.261 104.819 1.00 32.78 C
ATOM 16 O2 C A 10 -67.258 122.154 104.522 1.00 32.78 O
ATOM 17 N3 C A 10 -69.178 123.279 104.336 1.00 32.78 N
ATOM 18 C4 C A 10 -70.455 123.358 104.677 1.00 32.78 C
ATOM 19 N4 C A 10 -71.155 124.379 104.189 1.00 32.78 N
ATOM 20 C5 C A 10 -71.088 122.410 105.531 1.00 32.78 C
ATOM 21 C6 C A 10 -70.350 121.406 106.003 1.00 32.78 C
ATOM 22 P U A 11 -67.122 120.996 110.860 1.00 29.46 P
ATOM 23 OP1 U A 11 -66.387 120.318 111.964 1.00 29.46 O
ATOM 24 OP2 U A 11 -68.526 121.476 111.106 1.00 29.46 O
ATOM 25 O5' U A 11 -66.234 122.177 110.265 1.00 29.46 O
TER
ATOM 1 O3' U B 7 -75.567 126.640 110.903 1.00 28.77 O
ATOM 2 P A B 8 -74.898 125.852 109.659 1.00 42.98 P
ATOM 3 OP1 A B 8 -74.888 124.409 110.018 1.00 42.98 O
ATOM 4 OP2 A B 8 -73.607 126.516 109.355 1.00 42.98 O
ATOM 5 O5' A B 8 -75.921 126.112 108.467 1.00 42.98 O
ATOM 6 C5' A B 8 -77.091 125.311 108.321 1.00 42.98 C
ATOM 7 C4' A B 8 -77.177 124.674 106.953 1.00 42.98 C
ATOM 8 O4' A B 8 -77.012 125.704 105.928 1.00 42.98 O
ATOM 9 C3' A B 8 -76.111 123.606 106.657 1.00 42.98 C
ATOM 10 O3' A B 8 -76.677 122.543 105.891 1.00 42.98 O
ATOM 11 C2' A B 8 -75.120 124.362 105.784 1.00 42.98 C
ATOM 12 O2' A B 8 -74.339 123.550 104.933 1.00 42.98 O
ATOM 13 C1' A B 8 -76.065 125.246 104.992 1.00 42.98 C
ATOM 14 N9 A B 8 -75.412 126.374 104.329 1.00 43.56 N
ATOM 15 C8 A B 8 -74.056 126.602 104.320 1.00 43.56 C
ATOM 16 N7 A B 8 -73.675 127.630 103.606 1.00 43.56 N
ATOM 17 C5 A B 8 -74.867 128.086 103.079 1.00 43.56 C
ATOM 18 C6 A B 8 -75.124 129.157 102.222 1.00 43.56 C
ATOM 19 N6 A B 8 -74.143 129.937 101.767 1.00 43.56 N
ATOM 20 N1 A B 8 -76.412 129.378 101.856 1.00 43.56 N
ATOM 21 C2 A B 8 -77.358 128.551 102.338 1.00 43.56 C
ATOM 22 N3 A B 8 -77.239 127.496 103.157 1.00 43.56 N
ATOM 23 C4 A B 8 -75.948 127.316 103.491 1.00 43.56 C
ATOM 24 P G B 9 -77.364 121.286 106.610 1.00 40.73 P
ATOM 25 OP1 G B 9 -78.062 120.505 105.551 1.00 40.73 O
ATOM 26 OP2 G B 9 -78.151 121.826 107.749 1.00 40.73 O
ATOM 27 O5' G B 9 -76.130 120.451 107.153 1.00 40.73 O
TER
Atoms:
C2: (-68.448,122.261,104.819)
OP1: (-72.340,119.008,110.696)
OP2: (-73.188,120.907,109.214)
C4: (-70.455,123.358,104.677)
O5': (-71.017,119.715,108.683)
C3': (-68.031,120.210,108.536)
C1': (-68.228,120.183,106.180)
O4': (-69.108,119.222,106.708)
C5': (-70.067,118.677,108.849)
P: (-72.457,119.610,109.349)
O2: (-67.258,122.154,104.522)
C4': (-68.798,118.973,108.097)
C2': (-67.259,120.591,107.288)
O2': (-66.074,119.810,107.180)
N1: (-69.029,121.318,105.675)
N3: (-69.178,123.279,104.336)
N4: (-71.155,124.379,104.189)
C6: (-70.350,121.406,106.003)
C5: (-71.088,122.410,105.531)
O3': (-67.189,119.958,109.642)
OP1: (-72.340,119.008,110.696)
OP2: (-73.188,120.907,109.214)
C4: (-70.455,123.358,104.677)
O5': (-71.017,119.715,108.683)
C3': (-68.031,120.210,108.536)
C1': (-68.228,120.183,106.180)
O4': (-69.108,119.222,106.708)
C5': (-70.067,118.677,108.849)
P: (-72.457,119.610,109.349)
O2: (-67.258,122.154,104.522)
C4': (-68.798,118.973,108.097)
C2': (-67.259,120.591,107.288)
O2': (-66.074,119.810,107.180)
N1: (-69.029,121.318,105.675)
N3: (-69.178,123.279,104.336)
N4: (-71.155,124.379,104.189)
C6: (-70.350,121.406,106.003)
C5: (-71.088,122.410,105.531)
O3': (-67.189,119.958,109.642)
OP1: (-74.888,124.409,110.018)
OP2: (-73.607,126.516,109.355)
C3': (-76.111,123.606,106.657)
C1': (-76.065,125.246,104.992)
C5': (-77.091,125.311,108.321)
O4': (-77.012,125.704,105.928)
C8: (-74.056,126.602,104.320)
O2': (-74.339,123.550,104.933)
C6: (-75.124,129.157,102.222)
C5: (-74.867,128.086,103.079)
C4: (-75.948,127.316,103.491)
P: (-74.898,125.852,109.659)
C4': (-77.177,124.674,106.953)
C2': (-75.120,124.362,105.784)
C2: (-77.358,128.551,102.338)
N1: (-76.412,129.378,101.856)
N3: (-77.239,127.496,103.157)
N6: (-74.143,129.937,101.767)
N7: (-73.675,127.630,103.606)
N9: (-75.412,126.374,104.329)
O5': (-75.921,126.112,108.467)
O3': (-76.677,122.543,105.891)
OP2: (-73.607,126.516,109.355)
C3': (-76.111,123.606,106.657)
C1': (-76.065,125.246,104.992)
C5': (-77.091,125.311,108.321)
O4': (-77.012,125.704,105.928)
C8: (-74.056,126.602,104.320)
O2': (-74.339,123.550,104.933)
C6: (-75.124,129.157,102.222)
C5: (-74.867,128.086,103.079)
C4: (-75.948,127.316,103.491)
P: (-74.898,125.852,109.659)
C4': (-77.177,124.674,106.953)
C2': (-75.120,124.362,105.784)
C2: (-77.358,128.551,102.338)
N1: (-76.412,129.378,101.856)
N3: (-77.239,127.496,103.157)
N6: (-74.143,129.937,101.767)
N7: (-73.675,127.630,103.606)
N9: (-75.412,126.374,104.329)
O5': (-75.921,126.112,108.467)
O3': (-76.677,122.543,105.891)
Image (generated by PyMOL):