ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A300:A301

Extra

PDB:
ATOM 1 O3' C A 299 -5.556 145.451 43.623 1.00 66.63 O
ATOM 2 P U A 300 -4.614 146.223 44.664 1.00 68.07 P
ATOM 3 OP1 U A 300 -5.464 147.112 45.495 1.00 68.36 O
ATOM 4 OP2 U A 300 -3.468 146.790 43.914 1.00 68.30 O
ATOM 5 O5' U A 300 -4.096 145.059 45.610 1.00 68.64 O
ATOM 6 C5' U A 300 -5.027 144.326 46.420 1.00 68.07 C
ATOM 7 C4' U A 300 -4.296 143.344 47.300 1.00 66.85 C
ATOM 8 O4' U A 300 -3.769 142.266 46.483 1.00 65.44 O
ATOM 9 C3' U A 300 -3.086 143.896 48.045 1.00 66.00 C
ATOM 10 O3' U A 300 -3.447 144.603 49.239 1.00 65.17 O
ATOM 11 C2' U A 300 -2.284 142.629 48.301 1.00 65.17 C
ATOM 12 O2' U A 300 -2.814 141.860 49.363 1.00 66.74 O
ATOM 13 C1' U A 300 -2.509 141.871 46.988 1.00 64.51 C
ATOM 14 N1 U A 300 -1.489 142.168 45.971 1.00 61.99 N
ATOM 15 C2 U A 300 -0.335 141.425 46.000 1.00 61.38 C
ATOM 16 O2 U A 300 -0.145 140.526 46.802 1.00 61.62 O
ATOM 17 N3 U A 300 0.596 141.765 45.053 1.00 61.60 N
ATOM 18 C4 U A 300 0.490 142.749 44.097 1.00 61.49 C
ATOM 19 O4 U A 300 1.438 142.962 43.334 1.00 59.97 O
ATOM 20 C5 U A 300 -0.747 143.464 44.122 1.00 62.27 C
ATOM 21 C6 U A 300 -1.669 143.157 45.034 1.00 61.90 C
ATOM 22 P U A 301 -2.451 145.719 49.844 1.00 65.88 P
ATOM 23 OP1 U A 301 -3.057 146.341 51.046 1.00 64.93 O
ATOM 24 OP2 U A 301 -1.950 146.592 48.749 1.00 66.22 O
ATOM 25 O5' U A 301 -1.223 144.858 50.356 1.00 65.41 O
TER

ATOM 1 O3' U B 300 -3.447 144.603 49.239 1.00 65.17 O
ATOM 2 P U B 301 -2.451 145.719 49.844 1.00 65.88 P
ATOM 3 OP1 U B 301 -3.057 146.341 51.046 1.00 64.93 O
ATOM 4 OP2 U B 301 -1.950 146.592 48.749 1.00 66.22 O
ATOM 5 O5' U B 301 -1.223 144.858 50.356 1.00 65.41 O
ATOM 6 C5' U B 301 -1.373 143.902 51.406 1.00 63.74 C
ATOM 7 C4' U B 301 -0.027 143.329 51.749 1.00 62.26 C
ATOM 8 O4' U B 301 0.404 142.453 50.676 1.00 61.46 O
ATOM 9 C3' U B 301 1.094 144.354 51.859 1.00 61.30 C
ATOM 10 O3' U B 301 1.120 145.016 53.117 1.00 59.34 O
ATOM 11 C2' U B 301 2.325 143.501 51.607 1.00 61.09 C
ATOM 12 O2' U B 301 2.690 142.744 52.734 1.00 61.20 O
ATOM 13 C1' U B 301 1.809 142.555 50.524 1.00 61.46 C
ATOM 14 N1 U B 301 2.116 143.071 49.183 1.00 62.54 N
ATOM 15 C2 U B 301 3.351 142.744 48.670 1.00 62.56 C
ATOM 16 O2 U B 301 4.147 142.042 49.271 1.00 62.71 O
ATOM 17 N3 U B 301 3.623 143.268 47.430 1.00 63.29 N
ATOM 18 C4 U B 301 2.801 144.068 46.657 1.00 64.33 C
ATOM 19 O4 U B 301 3.207 144.473 45.565 1.00 64.37 O
ATOM 20 C5 U B 301 1.524 144.362 47.246 1.00 65.07 C
ATOM 21 C6 U B 301 1.227 143.864 48.459 1.00 64.27 C
ATOM 22 P G B 302 1.644 146.529 53.205 1.00 59.58 P
ATOM 23 OP1 G B 302 1.678 146.883 54.629 1.00 60.49 O
ATOM 24 OP2 G B 302 0.893 147.393 52.251 1.00 61.05 O
ATOM 25 O5' G B 302 3.154 146.447 52.714 1.00 59.77 O
TER

Atoms:
C4: (0.490,142.749,44.097)
N3: (0.596,141.765,45.053)
OP1: (-5.464,147.112,45.495)
OP2: (-3.468,146.790,43.914)
C2: (-0.335,141.425,46.000)
C1': (-2.509,141.871,46.988)
C3': (-3.086,143.896,48.045)
O5': (-4.096,145.059,45.610)
O4': (-3.769,142.266,46.483)
C5': (-5.027,144.326,46.420)
P: (-4.614,146.223,44.664)
C4': (-4.296,143.344,47.300)
C2': (-2.284,142.629,48.301)
O2': (-2.814,141.860,49.363)
N1: (-1.489,142.168,45.971)
O4: (1.438,142.962,43.334)
O2: (-0.145,140.526,46.802)
C6: (-1.669,143.157,45.034)
C5: (-0.747,143.464,44.122)
O3': (-3.447,144.603,49.239)
C4: (2.801,144.068,46.657)
N3: (3.623,143.268,47.430)
OP1: (-3.057,146.341,51.046)
OP2: (-1.950,146.592,48.749)
C2: (3.351,142.744,48.670)
C1': (1.809,142.555,50.524)
C3': (1.094,144.354,51.859)
O5': (-1.223,144.858,50.356)
O4': (0.404,142.453,50.676)
C5': (-1.373,143.902,51.406)
P: (-2.451,145.719,49.844)
C4': (-0.027,143.329,51.749)
C2': (2.325,143.501,51.607)
O2': (2.690,142.744,52.734)
N1: (2.116,143.071,49.183)
O4: (3.207,144.473,45.565)
O2: (4.147,142.042,49.271)
C6: (1.227,143.864,48.459)
C5: (1.524,144.362,47.246)
O3': (1.120,145.016,53.117)
Image (generated by PyMOL):
PyMOL image
show in jmol