Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A686:A684
Extra
PDB:
ATOM 1 O3' U A 685 -3.589 138.875 157.484 1.00 5.75 O
ATOM 2 P C A 686 -4.112 137.720 156.514 1.00 1.78 P
ATOM 3 OP1 C A 686 -3.261 136.508 156.769 1.00 1.78 O
ATOM 4 OP2 C A 686 -4.156 138.291 155.139 1.00 1.78 O
ATOM 5 O5' C A 686 -5.584 137.461 157.037 1.00 1.78 O
ATOM 6 C5' C A 686 -5.871 136.376 157.904 1.00 1.78 C
ATOM 7 C4' C A 686 -7.217 135.779 157.599 1.00 1.78 C
ATOM 8 O4' C A 686 -8.255 136.745 157.871 1.00 1.78 O
ATOM 9 C3' C A 686 -7.430 135.383 156.161 1.00 1.78 C
ATOM 10 O3' C A 686 -6.934 134.091 155.897 1.00 1.78 O
ATOM 11 C2' C A 686 -8.939 135.519 155.978 1.00 1.78 C
ATOM 12 O2' C A 686 -9.616 134.368 156.446 1.00 1.78 O
ATOM 13 C1' C A 686 -9.262 136.672 156.905 1.00 1.78 C
ATOM 14 N1 C A 686 -9.302 137.957 156.213 1.00 2.15 N
ATOM 15 C2 C A 686 -10.482 138.391 155.613 1.00 2.15 C
ATOM 16 O2 C A 686 -11.438 137.600 155.660 1.00 2.15 O
ATOM 17 N3 C A 686 -10.533 139.619 155.008 1.00 2.15 N
ATOM 18 C4 C A 686 -9.445 140.410 155.007 1.00 2.15 C
ATOM 19 N4 C A 686 -9.476 141.619 154.416 1.00 2.15 N
ATOM 20 C5 C A 686 -8.242 139.979 155.628 1.00 2.15 C
ATOM 21 C6 C A 686 -8.214 138.774 156.220 1.00 2.15 C
ATOM 22 P U A 687 -6.587 133.646 154.405 1.00 4.51 P
ATOM 23 OP1 U A 687 -6.520 132.153 154.413 1.00 4.51 O
ATOM 24 OP2 U A 687 -5.402 134.413 153.988 1.00 4.51 O
ATOM 25 O5' U A 687 -7.848 134.154 153.580 1.00 4.51 O
TER
ATOM 1 O3' G B 683 -7.097 146.876 156.837 1.00 8.46 O
ATOM 2 P A B 684 -5.751 146.990 155.988 1.00 5.70 P
ATOM 3 OP1 A B 684 -4.633 147.096 156.954 1.00 5.70 O
ATOM 4 OP2 A B 684 -5.940 148.083 154.972 1.00 5.70 O
ATOM 5 O5' A B 684 -5.705 145.588 155.267 1.00 5.70 O
ATOM 6 C5' A B 684 -6.858 145.049 154.656 1.00 5.70 C
ATOM 7 C4' A B 684 -6.503 143.853 153.829 1.00 5.70 C
ATOM 8 O4' A B 684 -7.652 143.480 153.032 1.00 5.70 O
ATOM 9 C3' A B 684 -5.351 144.082 152.856 1.00 5.70 C
ATOM 10 O3' A B 684 -4.517 142.918 152.758 1.00 5.70 O
ATOM 11 C2' A B 684 -6.066 144.312 151.547 1.00 5.70 C
ATOM 12 O2' A B 684 -5.327 143.964 150.409 1.00 5.70 O
ATOM 13 C1' A B 684 -7.289 143.431 151.686 1.00 5.70 C
ATOM 14 N9 A B 684 -8.399 143.910 150.894 1.00 5.49 N
ATOM 15 C8 A B 684 -8.540 145.201 150.485 1.00 5.49 C
ATOM 16 N7 A B 684 -9.571 145.415 149.727 1.00 5.49 N
ATOM 17 C5 A B 684 -10.119 144.173 149.640 1.00 5.49 C
ATOM 18 C6 A B 684 -11.239 143.772 148.959 1.00 5.49 C
ATOM 19 N6 A B 684 -11.950 144.655 148.262 1.00 5.49 N
ATOM 20 N1 A B 684 -11.563 142.464 149.022 1.00 5.49 N
ATOM 21 C2 A B 684 -10.774 141.648 149.738 1.00 5.49 C
ATOM 22 N3 A B 684 -9.670 141.925 150.435 1.00 5.49 N
ATOM 23 C4 A B 684 -9.408 143.225 150.329 1.00 5.49 C
ATOM 24 P U B 685 -3.632 142.465 154.014 1.00 5.75 P
ATOM 25 OP1 U B 685 -2.606 143.517 154.249 1.00 5.75 O
ATOM 26 OP2 U B 685 -3.193 141.090 153.761 1.00 5.75 O
ATOM 27 O5' U B 685 -4.736 142.474 155.163 1.00 5.75 O
TER
ATOM 2 P C A 686 -4.112 137.720 156.514 1.00 1.78 P
ATOM 3 OP1 C A 686 -3.261 136.508 156.769 1.00 1.78 O
ATOM 4 OP2 C A 686 -4.156 138.291 155.139 1.00 1.78 O
ATOM 5 O5' C A 686 -5.584 137.461 157.037 1.00 1.78 O
ATOM 6 C5' C A 686 -5.871 136.376 157.904 1.00 1.78 C
ATOM 7 C4' C A 686 -7.217 135.779 157.599 1.00 1.78 C
ATOM 8 O4' C A 686 -8.255 136.745 157.871 1.00 1.78 O
ATOM 9 C3' C A 686 -7.430 135.383 156.161 1.00 1.78 C
ATOM 10 O3' C A 686 -6.934 134.091 155.897 1.00 1.78 O
ATOM 11 C2' C A 686 -8.939 135.519 155.978 1.00 1.78 C
ATOM 12 O2' C A 686 -9.616 134.368 156.446 1.00 1.78 O
ATOM 13 C1' C A 686 -9.262 136.672 156.905 1.00 1.78 C
ATOM 14 N1 C A 686 -9.302 137.957 156.213 1.00 2.15 N
ATOM 15 C2 C A 686 -10.482 138.391 155.613 1.00 2.15 C
ATOM 16 O2 C A 686 -11.438 137.600 155.660 1.00 2.15 O
ATOM 17 N3 C A 686 -10.533 139.619 155.008 1.00 2.15 N
ATOM 18 C4 C A 686 -9.445 140.410 155.007 1.00 2.15 C
ATOM 19 N4 C A 686 -9.476 141.619 154.416 1.00 2.15 N
ATOM 20 C5 C A 686 -8.242 139.979 155.628 1.00 2.15 C
ATOM 21 C6 C A 686 -8.214 138.774 156.220 1.00 2.15 C
ATOM 22 P U A 687 -6.587 133.646 154.405 1.00 4.51 P
ATOM 23 OP1 U A 687 -6.520 132.153 154.413 1.00 4.51 O
ATOM 24 OP2 U A 687 -5.402 134.413 153.988 1.00 4.51 O
ATOM 25 O5' U A 687 -7.848 134.154 153.580 1.00 4.51 O
TER
ATOM 1 O3' G B 683 -7.097 146.876 156.837 1.00 8.46 O
ATOM 2 P A B 684 -5.751 146.990 155.988 1.00 5.70 P
ATOM 3 OP1 A B 684 -4.633 147.096 156.954 1.00 5.70 O
ATOM 4 OP2 A B 684 -5.940 148.083 154.972 1.00 5.70 O
ATOM 5 O5' A B 684 -5.705 145.588 155.267 1.00 5.70 O
ATOM 6 C5' A B 684 -6.858 145.049 154.656 1.00 5.70 C
ATOM 7 C4' A B 684 -6.503 143.853 153.829 1.00 5.70 C
ATOM 8 O4' A B 684 -7.652 143.480 153.032 1.00 5.70 O
ATOM 9 C3' A B 684 -5.351 144.082 152.856 1.00 5.70 C
ATOM 10 O3' A B 684 -4.517 142.918 152.758 1.00 5.70 O
ATOM 11 C2' A B 684 -6.066 144.312 151.547 1.00 5.70 C
ATOM 12 O2' A B 684 -5.327 143.964 150.409 1.00 5.70 O
ATOM 13 C1' A B 684 -7.289 143.431 151.686 1.00 5.70 C
ATOM 14 N9 A B 684 -8.399 143.910 150.894 1.00 5.49 N
ATOM 15 C8 A B 684 -8.540 145.201 150.485 1.00 5.49 C
ATOM 16 N7 A B 684 -9.571 145.415 149.727 1.00 5.49 N
ATOM 17 C5 A B 684 -10.119 144.173 149.640 1.00 5.49 C
ATOM 18 C6 A B 684 -11.239 143.772 148.959 1.00 5.49 C
ATOM 19 N6 A B 684 -11.950 144.655 148.262 1.00 5.49 N
ATOM 20 N1 A B 684 -11.563 142.464 149.022 1.00 5.49 N
ATOM 21 C2 A B 684 -10.774 141.648 149.738 1.00 5.49 C
ATOM 22 N3 A B 684 -9.670 141.925 150.435 1.00 5.49 N
ATOM 23 C4 A B 684 -9.408 143.225 150.329 1.00 5.49 C
ATOM 24 P U B 685 -3.632 142.465 154.014 1.00 5.75 P
ATOM 25 OP1 U B 685 -2.606 143.517 154.249 1.00 5.75 O
ATOM 26 OP2 U B 685 -3.193 141.090 153.761 1.00 5.75 O
ATOM 27 O5' U B 685 -4.736 142.474 155.163 1.00 5.75 O
TER
Atoms:
C2: (-10.482,138.391,155.613)
OP1: (-3.261,136.508,156.769)
OP2: (-4.156,138.291,155.139)
C4: (-9.445,140.410,155.007)
O5': (-5.584,137.461,157.037)
C3': (-7.430,135.383,156.161)
C1': (-9.262,136.672,156.905)
O4': (-8.255,136.745,157.871)
C5': (-5.871,136.376,157.904)
P: (-4.112,137.720,156.514)
O2: (-11.438,137.600,155.660)
C4': (-7.217,135.779,157.599)
C2': (-8.939,135.519,155.978)
O2': (-9.616,134.368,156.446)
N1: (-9.302,137.957,156.213)
N3: (-10.533,139.619,155.008)
N4: (-9.476,141.619,154.416)
C6: (-8.214,138.774,156.220)
C5: (-8.242,139.979,155.628)
O3': (-6.934,134.091,155.897)
OP1: (-3.261,136.508,156.769)
OP2: (-4.156,138.291,155.139)
C4: (-9.445,140.410,155.007)
O5': (-5.584,137.461,157.037)
C3': (-7.430,135.383,156.161)
C1': (-9.262,136.672,156.905)
O4': (-8.255,136.745,157.871)
C5': (-5.871,136.376,157.904)
P: (-4.112,137.720,156.514)
O2: (-11.438,137.600,155.660)
C4': (-7.217,135.779,157.599)
C2': (-8.939,135.519,155.978)
O2': (-9.616,134.368,156.446)
N1: (-9.302,137.957,156.213)
N3: (-10.533,139.619,155.008)
N4: (-9.476,141.619,154.416)
C6: (-8.214,138.774,156.220)
C5: (-8.242,139.979,155.628)
O3': (-6.934,134.091,155.897)
OP1: (-4.633,147.096,156.954)
OP2: (-5.940,148.083,154.972)
C3': (-5.351,144.082,152.856)
C1': (-7.289,143.431,151.686)
C5': (-6.858,145.049,154.656)
O4': (-7.652,143.480,153.032)
C8: (-8.540,145.201,150.485)
O2': (-5.327,143.964,150.409)
C6: (-11.239,143.772,148.959)
C5: (-10.119,144.173,149.640)
C4: (-9.408,143.225,150.329)
P: (-5.751,146.990,155.988)
C4': (-6.503,143.853,153.829)
C2': (-6.066,144.312,151.547)
C2: (-10.774,141.648,149.738)
N1: (-11.563,142.464,149.022)
N3: (-9.670,141.925,150.435)
N6: (-11.950,144.655,148.262)
N7: (-9.571,145.415,149.727)
N9: (-8.399,143.910,150.894)
O5': (-5.705,145.588,155.267)
O3': (-4.517,142.918,152.758)
OP2: (-5.940,148.083,154.972)
C3': (-5.351,144.082,152.856)
C1': (-7.289,143.431,151.686)
C5': (-6.858,145.049,154.656)
O4': (-7.652,143.480,153.032)
C8: (-8.540,145.201,150.485)
O2': (-5.327,143.964,150.409)
C6: (-11.239,143.772,148.959)
C5: (-10.119,144.173,149.640)
C4: (-9.408,143.225,150.329)
P: (-5.751,146.990,155.988)
C4': (-6.503,143.853,153.829)
C2': (-6.066,144.312,151.547)
C2: (-10.774,141.648,149.738)
N1: (-11.563,142.464,149.022)
N3: (-9.670,141.925,150.435)
N6: (-11.950,144.655,148.262)
N7: (-9.571,145.415,149.727)
N9: (-8.399,143.910,150.894)
O5': (-5.705,145.588,155.267)
O3': (-4.517,142.918,152.758)
Image (generated by PyMOL):