ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1IL2:D45:D56

Extra

PDB:
ATOM 1 O3' A A 44 24.966 -39.359 -1.074 1.00 44.56 O
ATOM 2 P U A 45 26.440 -39.885 -1.439 1.00 45.03 P
ATOM 3 OP1 U A 45 27.271 -38.748 -1.918 1.00 45.33 O
ATOM 4 OP2 U A 45 26.246 -41.064 -2.312 1.00 52.10 O
ATOM 5 O5' U A 45 27.031 -40.379 -0.043 1.00 41.97 O
ATOM 6 C5' U A 45 28.163 -39.722 0.550 1.00 42.34 C
ATOM 7 C4' U A 45 27.835 -39.295 1.953 1.00 46.11 C
ATOM 8 O4' U A 45 27.364 -40.444 2.695 1.00 45.73 O
ATOM 9 C3' U A 45 28.982 -38.687 2.750 1.00 48.49 C
ATOM 10 O3' U A 45 28.439 -37.641 3.552 1.00 54.31 O
ATOM 11 C2' U A 45 29.436 -39.840 3.644 1.00 49.65 C
ATOM 12 O2' U A 45 29.982 -39.409 4.873 1.00 49.44 O
ATOM 13 C1' U A 45 28.126 -40.587 3.879 1.00 49.00 C
ATOM 14 N1 U A 45 28.299 -42.021 4.150 1.00 52.01 N
ATOM 15 C2 U A 45 27.936 -42.486 5.402 1.00 54.89 C
ATOM 16 O2 U A 45 27.502 -41.766 6.280 1.00 52.08 O
ATOM 17 N3 U A 45 28.090 -43.838 5.587 1.00 58.83 N
ATOM 18 C4 U A 45 28.567 -44.753 4.672 1.00 57.45 C
ATOM 19 O4 U A 45 28.656 -45.938 4.996 1.00 57.37 O
ATOM 20 C5 U A 45 28.935 -44.189 3.405 1.00 58.73 C
ATOM 21 C6 U A 45 28.793 -42.874 3.198 1.00 57.74 C
TER

ATOM 1 O3' A B 55 36.145 -43.687 3.074 1.00 49.13 O
ATOM 2 P U B 56 35.056 -43.290 1.963 1.00 52.13 P
ATOM 3 OP1 U B 56 34.659 -44.520 1.232 1.00 52.80 O
ATOM 4 OP2 U B 56 35.566 -42.121 1.206 1.00 56.19 O
ATOM 5 O5' U B 56 33.811 -42.812 2.833 1.00 52.68 O
ATOM 6 C5' U B 56 33.451 -41.419 2.926 1.00 46.84 C
ATOM 7 C4' U B 56 32.816 -41.138 4.265 1.00 40.94 C
ATOM 8 O4' U B 56 31.659 -41.993 4.429 1.00 39.21 O
ATOM 9 C3' U B 56 33.711 -41.441 5.454 1.00 40.69 C
ATOM 10 O3' U B 56 34.491 -40.290 5.752 1.00 42.01 O
ATOM 11 C2' U B 56 32.717 -41.784 6.563 1.00 42.50 C
ATOM 12 O2' U B 56 32.220 -40.671 7.274 1.00 41.51 O
ATOM 13 C1' U B 56 31.565 -42.414 5.776 1.00 45.62 C
ATOM 14 N1 U B 56 31.547 -43.883 5.812 1.00 51.49 N
ATOM 15 C2 U B 56 31.145 -44.488 6.993 1.00 56.16 C
ATOM 16 O2 U B 56 30.839 -43.860 7.991 1.00 58.61 O
ATOM 17 N3 U B 56 31.117 -45.860 6.964 1.00 62.38 N
ATOM 18 C4 U B 56 31.448 -46.674 5.903 1.00 59.25 C
ATOM 19 O4 U B 56 31.334 -47.895 6.025 1.00 59.87 O
ATOM 20 C5 U B 56 31.872 -45.976 4.721 1.00 57.59 C
ATOM 21 C6 U B 56 31.907 -44.638 4.717 1.00 50.59 C
ATOM 22 P U B 57 36.026 -40.444 6.193 1.00 46.39 P
ATOM 23 OP1 U B 57 36.661 -39.100 6.124 1.00 47.36 O
ATOM 24 OP2 U B 57 36.633 -41.586 5.455 1.00 41.84 O
ATOM 25 O5' U B 57 35.931 -40.836 7.724 1.00 36.90 O
TER

Atoms:
C4: (28.567,-44.753,4.672)
N3: (28.090,-43.838,5.587)
OP1: (27.271,-38.748,-1.918)
OP2: (26.246,-41.064,-2.312)
C2: (27.936,-42.486,5.402)
C1': (28.126,-40.587,3.879)
C3': (28.982,-38.687,2.750)
O5': (27.031,-40.379,-0.043)
O4': (27.364,-40.444,2.695)
C5': (28.163,-39.722,0.550)
P: (26.440,-39.885,-1.439)
C4': (27.835,-39.295,1.953)
C2': (29.436,-39.840,3.644)
O2': (29.982,-39.409,4.873)
N1: (28.299,-42.021,4.150)
O4: (28.656,-45.938,4.996)
O2: (27.502,-41.766,6.280)
C6: (28.793,-42.874,3.198)
C5: (28.935,-44.189,3.405)
O3': (28.439,-37.641,3.552)
C4: (31.448,-46.674,5.903)
N3: (31.117,-45.860,6.964)
OP1: (34.659,-44.520,1.232)
OP2: (35.566,-42.121,1.206)
C2: (31.145,-44.488,6.993)
C1': (31.565,-42.414,5.776)
C3': (33.711,-41.441,5.454)
O5': (33.811,-42.812,2.833)
O4': (31.659,-41.993,4.429)
C5': (33.451,-41.419,2.926)
P: (35.056,-43.290,1.963)
C4': (32.816,-41.138,4.265)
C2': (32.717,-41.784,6.563)
O2': (32.220,-40.671,7.274)
N1: (31.547,-43.883,5.812)
O4: (31.334,-47.895,6.025)
O2: (30.839,-43.860,7.991)
C6: (31.907,-44.638,4.717)
C5: (31.872,-45.976,4.721)
O3': (34.491,-40.290,5.752)
Image (generated by PyMOL):
PyMOL image
show in jmol