Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1SDR:B9:B10
Extra
PDB:
ATOM 1 O3' C A 8 12.601 5.666 5.551 1.00 24.88 O
ATOM 2 P U A 9 13.158 6.906 4.727 1.00 21.65 P
ATOM 3 OP1 U A 9 14.433 7.222 5.407 1.00 21.32 O
ATOM 4 OP2 U A 9 12.065 7.905 4.582 1.00 21.03 O
ATOM 5 O5' U A 9 13.470 6.330 3.276 1.00 18.86 O
ATOM 6 C5' U A 9 14.601 5.487 3.028 1.00 17.64 C
ATOM 7 C4' U A 9 14.458 4.903 1.645 1.00 13.44 C
ATOM 8 O4' U A 9 13.161 4.309 1.524 1.00 14.76 O
ATOM 9 C3' U A 9 14.407 6.013 0.656 1.00 15.47 C
ATOM 10 O3' U A 9 15.719 6.566 0.412 1.00 19.19 O
ATOM 11 C2' U A 9 13.742 5.309 -0.498 1.00 14.70 C
ATOM 12 O2' U A 9 14.659 4.408 -1.080 1.00 19.63 O
ATOM 13 C1' U A 9 12.641 4.516 0.186 1.00 11.71 C
ATOM 14 N1 U A 9 11.282 5.153 0.081 1.00 4.88 N
ATOM 15 C2 U A 9 10.681 5.184 -1.163 1.00 7.03 C
ATOM 16 O2 U A 9 11.192 4.706 -2.172 1.00 12.87 O
ATOM 17 N3 U A 9 9.443 5.800 -1.258 1.00 2.90 N
ATOM 18 C4 U A 9 8.742 6.380 -0.223 1.00 2.91 C
ATOM 19 O4 U A 9 7.636 6.858 -0.456 1.00 2.00 O
ATOM 20 C5 U A 9 9.429 6.321 1.052 1.00 2.00 C
ATOM 21 C6 U A 9 10.644 5.717 1.155 1.00 5.65 C
ATOM 22 P U A 10 16.053 8.010 -0.278 1.00 17.42 P
ATOM 23 OP1 U A 10 17.502 8.083 -0.516 1.00 20.05 O
ATOM 24 OP2 U A 10 15.440 9.092 0.527 1.00 16.70 O
ATOM 25 O5' U A 10 15.354 7.938 -1.725 1.00 10.83 O
TER
ATOM 1 O3' U B 9 15.719 6.566 0.412 1.00 19.19 O
ATOM 2 P U B 10 16.053 8.010 -0.278 1.00 17.42 P
ATOM 3 OP1 U B 10 17.502 8.083 -0.516 1.00 20.05 O
ATOM 4 OP2 U B 10 15.440 9.092 0.527 1.00 16.70 O
ATOM 5 O5' U B 10 15.354 7.938 -1.725 1.00 10.83 O
ATOM 6 C5' U B 10 16.150 7.382 -2.774 1.00 14.25 C
ATOM 7 C4' U B 10 15.373 7.088 -4.067 1.00 17.85 C
ATOM 8 O4' U B 10 14.122 6.460 -3.760 1.00 15.69 O
ATOM 9 C3' U B 10 14.966 8.344 -4.808 1.00 19.29 C
ATOM 10 O3' U B 10 16.069 9.040 -5.443 1.00 21.95 O
ATOM 11 C2' U B 10 13.837 7.857 -5.729 1.00 18.71 C
ATOM 12 O2' U B 10 14.243 7.097 -6.894 1.00 21.63 O
ATOM 13 C1' U B 10 13.155 6.932 -4.729 1.00 15.40 C
ATOM 14 N1 U B 10 11.990 7.544 -4.045 1.00 11.24 N
ATOM 15 C2 U B 10 10.780 7.637 -4.740 1.00 8.48 C
ATOM 16 O2 U B 10 10.583 7.259 -5.907 1.00 5.29 O
ATOM 17 N3 U B 10 9.763 8.202 -4.007 1.00 3.69 N
ATOM 18 C4 U B 10 9.819 8.662 -2.718 1.00 5.92 C
ATOM 19 O4 U B 10 8.812 9.136 -2.202 1.00 8.95 O
ATOM 20 C5 U B 10 11.084 8.531 -2.080 1.00 2.00 C
ATOM 21 C6 U B 10 12.109 7.983 -2.749 1.00 8.08 C
ATOM 22 P A B 11 16.360 10.642 -5.256 1.00 21.76 P
ATOM 23 OP1 A B 11 17.701 10.896 -5.829 1.00 23.45 O
ATOM 24 OP2 A B 11 16.070 11.080 -3.853 1.00 15.06 O
ATOM 25 O5' A B 11 15.295 11.239 -6.270 1.00 16.43 O
TER
ATOM 2 P U A 9 13.158 6.906 4.727 1.00 21.65 P
ATOM 3 OP1 U A 9 14.433 7.222 5.407 1.00 21.32 O
ATOM 4 OP2 U A 9 12.065 7.905 4.582 1.00 21.03 O
ATOM 5 O5' U A 9 13.470 6.330 3.276 1.00 18.86 O
ATOM 6 C5' U A 9 14.601 5.487 3.028 1.00 17.64 C
ATOM 7 C4' U A 9 14.458 4.903 1.645 1.00 13.44 C
ATOM 8 O4' U A 9 13.161 4.309 1.524 1.00 14.76 O
ATOM 9 C3' U A 9 14.407 6.013 0.656 1.00 15.47 C
ATOM 10 O3' U A 9 15.719 6.566 0.412 1.00 19.19 O
ATOM 11 C2' U A 9 13.742 5.309 -0.498 1.00 14.70 C
ATOM 12 O2' U A 9 14.659 4.408 -1.080 1.00 19.63 O
ATOM 13 C1' U A 9 12.641 4.516 0.186 1.00 11.71 C
ATOM 14 N1 U A 9 11.282 5.153 0.081 1.00 4.88 N
ATOM 15 C2 U A 9 10.681 5.184 -1.163 1.00 7.03 C
ATOM 16 O2 U A 9 11.192 4.706 -2.172 1.00 12.87 O
ATOM 17 N3 U A 9 9.443 5.800 -1.258 1.00 2.90 N
ATOM 18 C4 U A 9 8.742 6.380 -0.223 1.00 2.91 C
ATOM 19 O4 U A 9 7.636 6.858 -0.456 1.00 2.00 O
ATOM 20 C5 U A 9 9.429 6.321 1.052 1.00 2.00 C
ATOM 21 C6 U A 9 10.644 5.717 1.155 1.00 5.65 C
ATOM 22 P U A 10 16.053 8.010 -0.278 1.00 17.42 P
ATOM 23 OP1 U A 10 17.502 8.083 -0.516 1.00 20.05 O
ATOM 24 OP2 U A 10 15.440 9.092 0.527 1.00 16.70 O
ATOM 25 O5' U A 10 15.354 7.938 -1.725 1.00 10.83 O
TER
ATOM 1 O3' U B 9 15.719 6.566 0.412 1.00 19.19 O
ATOM 2 P U B 10 16.053 8.010 -0.278 1.00 17.42 P
ATOM 3 OP1 U B 10 17.502 8.083 -0.516 1.00 20.05 O
ATOM 4 OP2 U B 10 15.440 9.092 0.527 1.00 16.70 O
ATOM 5 O5' U B 10 15.354 7.938 -1.725 1.00 10.83 O
ATOM 6 C5' U B 10 16.150 7.382 -2.774 1.00 14.25 C
ATOM 7 C4' U B 10 15.373 7.088 -4.067 1.00 17.85 C
ATOM 8 O4' U B 10 14.122 6.460 -3.760 1.00 15.69 O
ATOM 9 C3' U B 10 14.966 8.344 -4.808 1.00 19.29 C
ATOM 10 O3' U B 10 16.069 9.040 -5.443 1.00 21.95 O
ATOM 11 C2' U B 10 13.837 7.857 -5.729 1.00 18.71 C
ATOM 12 O2' U B 10 14.243 7.097 -6.894 1.00 21.63 O
ATOM 13 C1' U B 10 13.155 6.932 -4.729 1.00 15.40 C
ATOM 14 N1 U B 10 11.990 7.544 -4.045 1.00 11.24 N
ATOM 15 C2 U B 10 10.780 7.637 -4.740 1.00 8.48 C
ATOM 16 O2 U B 10 10.583 7.259 -5.907 1.00 5.29 O
ATOM 17 N3 U B 10 9.763 8.202 -4.007 1.00 3.69 N
ATOM 18 C4 U B 10 9.819 8.662 -2.718 1.00 5.92 C
ATOM 19 O4 U B 10 8.812 9.136 -2.202 1.00 8.95 O
ATOM 20 C5 U B 10 11.084 8.531 -2.080 1.00 2.00 C
ATOM 21 C6 U B 10 12.109 7.983 -2.749 1.00 8.08 C
ATOM 22 P A B 11 16.360 10.642 -5.256 1.00 21.76 P
ATOM 23 OP1 A B 11 17.701 10.896 -5.829 1.00 23.45 O
ATOM 24 OP2 A B 11 16.070 11.080 -3.853 1.00 15.06 O
ATOM 25 O5' A B 11 15.295 11.239 -6.270 1.00 16.43 O
TER
Atoms:
C4: (8.742,6.380,-0.223)
N3: (9.443,5.800,-1.258)
OP1: (14.433,7.222,5.407)
OP2: (12.065,7.905,4.582)
C2: (10.681,5.184,-1.163)
C1': (12.641,4.516,0.186)
C3': (14.407,6.013,0.656)
O5': (13.470,6.330,3.276)
O4': (13.161,4.309,1.524)
C5': (14.601,5.487,3.028)
P: (13.158,6.906,4.727)
C4': (14.458,4.903,1.645)
C2': (13.742,5.309,-0.498)
O2': (14.659,4.408,-1.080)
N1: (11.282,5.153,0.081)
O4: (7.636,6.858,-0.456)
O2: (11.192,4.706,-2.172)
C6: (10.644,5.717,1.155)
C5: (9.429,6.321,1.052)
O3': (15.719,6.566,0.412)
N3: (9.443,5.800,-1.258)
OP1: (14.433,7.222,5.407)
OP2: (12.065,7.905,4.582)
C2: (10.681,5.184,-1.163)
C1': (12.641,4.516,0.186)
C3': (14.407,6.013,0.656)
O5': (13.470,6.330,3.276)
O4': (13.161,4.309,1.524)
C5': (14.601,5.487,3.028)
P: (13.158,6.906,4.727)
C4': (14.458,4.903,1.645)
C2': (13.742,5.309,-0.498)
O2': (14.659,4.408,-1.080)
N1: (11.282,5.153,0.081)
O4: (7.636,6.858,-0.456)
O2: (11.192,4.706,-2.172)
C6: (10.644,5.717,1.155)
C5: (9.429,6.321,1.052)
O3': (15.719,6.566,0.412)
C4: (9.819,8.662,-2.718)
N3: (9.763,8.202,-4.007)
OP1: (17.502,8.083,-0.516)
OP2: (15.440,9.092,0.527)
C2: (10.780,7.637,-4.740)
C1': (13.155,6.932,-4.729)
C3': (14.966,8.344,-4.808)
O5': (15.354,7.938,-1.725)
O4': (14.122,6.460,-3.760)
C5': (16.150,7.382,-2.774)
P: (16.053,8.010,-0.278)
C4': (15.373,7.088,-4.067)
C2': (13.837,7.857,-5.729)
O2': (14.243,7.097,-6.894)
N1: (11.990,7.544,-4.045)
O4: (8.812,9.136,-2.202)
O2: (10.583,7.259,-5.907)
C6: (12.109,7.983,-2.749)
C5: (11.084,8.531,-2.080)
O3': (16.069,9.040,-5.443)
N3: (9.763,8.202,-4.007)
OP1: (17.502,8.083,-0.516)
OP2: (15.440,9.092,0.527)
C2: (10.780,7.637,-4.740)
C1': (13.155,6.932,-4.729)
C3': (14.966,8.344,-4.808)
O5': (15.354,7.938,-1.725)
O4': (14.122,6.460,-3.760)
C5': (16.150,7.382,-2.774)
P: (16.053,8.010,-0.278)
C4': (15.373,7.088,-4.067)
C2': (13.837,7.857,-5.729)
O2': (14.243,7.097,-6.894)
N1: (11.990,7.544,-4.045)
O4: (8.812,9.136,-2.202)
O2: (10.583,7.259,-5.907)
C6: (12.109,7.983,-2.749)
C5: (11.084,8.531,-2.080)
O3': (16.069,9.040,-5.443)
Image (generated by PyMOL):