Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2234:A2480
Extra
PDB:
ATOM 1 O3' U A2233 -54.328 133.412 161.977 1.00 59.61 O
ATOM 2 P G A2234 -55.748 132.964 162.592 1.00 62.66 P
ATOM 3 OP1 G A2234 -56.388 132.088 161.588 1.00 59.29 O
ATOM 4 OP2 G A2234 -56.479 134.161 163.080 1.00 68.91 O
ATOM 5 O5' G A2234 -55.355 132.084 163.872 1.00 49.58 O
ATOM 6 C5' G A2234 -54.794 130.813 163.657 1.00 54.93 C
ATOM 7 C4' G A2234 -53.806 130.517 164.762 1.00 58.05 C
ATOM 8 O4' G A2234 -54.501 130.379 166.032 1.00 57.81 O
ATOM 9 C3' G A2234 -52.977 129.254 164.543 1.00 63.42 C
ATOM 10 O3' G A2234 -51.588 129.529 164.871 1.00 65.80 O
ATOM 11 C2' G A2234 -53.675 128.231 165.450 1.00 58.80 C
ATOM 12 O2' G A2234 -52.780 127.267 165.974 1.00 52.41 O
ATOM 13 C1' G A2234 -54.282 129.088 166.569 1.00 66.35 C
ATOM 14 N9 G A2234 -55.569 128.636 167.102 1.00 75.02 N
ATOM 15 C8 G A2234 -55.822 127.724 168.102 1.00 73.96 C
ATOM 16 N7 G A2234 -57.099 127.551 168.353 1.00 61.60 N
ATOM 17 C5 G A2234 -57.739 128.403 167.463 1.00 57.91 C
ATOM 18 C6 G A2234 -59.117 128.658 167.256 1.00 62.85 C
ATOM 19 O6 G A2234 -60.090 128.162 167.835 1.00 77.53 O
ATOM 20 N1 G A2234 -59.331 129.599 166.251 1.00 67.37 N
ATOM 21 C2 G A2234 -58.325 130.219 165.542 1.00 79.48 C
ATOM 22 N2 G A2234 -58.702 131.107 164.610 1.00 90.59 N
ATOM 23 N3 G A2234 -57.030 129.993 165.729 1.00 84.08 N
ATOM 24 C4 G A2234 -56.809 129.075 166.698 1.00 73.68 C
ATOM 25 P G A2235 -50.358 128.792 164.147 1.00 53.83 P
ATOM 26 OP1 G A2235 -50.762 128.342 162.793 1.00 55.87 O
ATOM 27 OP2 G A2235 -49.816 127.865 165.173 1.00 40.72 O
ATOM 28 O5' G A2235 -49.289 129.948 163.845 1.00 57.51 O
TER
ATOM 1 O3' G B2479 -54.549 122.534 165.472 1.00 33.19 O
ATOM 2 P C B2480 -53.682 123.838 165.816 1.00 31.94 P
ATOM 3 OP1 C B2480 -54.476 125.017 165.413 1.00 47.73 O
ATOM 4 OP2 C B2480 -52.328 123.650 165.233 1.00 49.76 O
ATOM 5 O5' C B2480 -53.561 123.803 167.409 1.00 32.82 O
ATOM 6 C5' C B2480 -54.616 124.309 168.159 1.00 30.54 C
ATOM 7 C4' C B2480 -54.309 124.076 169.609 1.00 31.18 C
ATOM 8 O4' C B2480 -53.841 122.719 169.712 1.00 33.36 O
ATOM 9 C3' C B2480 -53.150 124.890 170.158 1.00 34.68 C
ATOM 10 O3' C B2480 -53.605 126.147 170.654 1.00 30.95 O
ATOM 11 C2' C B2480 -52.618 124.007 171.292 1.00 42.17 C
ATOM 12 O2' C B2480 -53.053 124.384 172.595 1.00 39.59 O
ATOM 13 C1' C B2480 -53.131 122.611 170.924 1.00 36.60 C
ATOM 14 N1 C B2480 -52.025 121.695 170.667 1.00 34.67 N
ATOM 15 C2 C B2480 -51.484 120.928 171.710 1.00 37.89 C
ATOM 16 O2 C B2480 -51.956 121.011 172.856 1.00 39.08 O
ATOM 17 N3 C B2480 -50.449 120.108 171.428 1.00 38.53 N
ATOM 18 C4 C B2480 -49.981 120.047 170.180 1.00 43.51 C
ATOM 19 N4 C B2480 -48.961 119.215 169.936 1.00 53.15 N
ATOM 20 C5 C B2480 -50.523 120.829 169.117 1.00 40.29 C
ATOM 21 C6 C B2480 -51.539 121.640 169.402 1.00 37.23 C
ATOM 22 P A B2481 -52.632 127.405 170.536 1.00 52.07 P
ATOM 23 OP1 A B2481 -53.306 128.607 171.095 1.00 49.36 O
ATOM 24 OP2 A B2481 -52.104 127.405 169.147 1.00 59.01 O
ATOM 25 O5' A B2481 -51.424 127.014 171.502 1.00 48.24 O
TER
ATOM 2 P G A2234 -55.748 132.964 162.592 1.00 62.66 P
ATOM 3 OP1 G A2234 -56.388 132.088 161.588 1.00 59.29 O
ATOM 4 OP2 G A2234 -56.479 134.161 163.080 1.00 68.91 O
ATOM 5 O5' G A2234 -55.355 132.084 163.872 1.00 49.58 O
ATOM 6 C5' G A2234 -54.794 130.813 163.657 1.00 54.93 C
ATOM 7 C4' G A2234 -53.806 130.517 164.762 1.00 58.05 C
ATOM 8 O4' G A2234 -54.501 130.379 166.032 1.00 57.81 O
ATOM 9 C3' G A2234 -52.977 129.254 164.543 1.00 63.42 C
ATOM 10 O3' G A2234 -51.588 129.529 164.871 1.00 65.80 O
ATOM 11 C2' G A2234 -53.675 128.231 165.450 1.00 58.80 C
ATOM 12 O2' G A2234 -52.780 127.267 165.974 1.00 52.41 O
ATOM 13 C1' G A2234 -54.282 129.088 166.569 1.00 66.35 C
ATOM 14 N9 G A2234 -55.569 128.636 167.102 1.00 75.02 N
ATOM 15 C8 G A2234 -55.822 127.724 168.102 1.00 73.96 C
ATOM 16 N7 G A2234 -57.099 127.551 168.353 1.00 61.60 N
ATOM 17 C5 G A2234 -57.739 128.403 167.463 1.00 57.91 C
ATOM 18 C6 G A2234 -59.117 128.658 167.256 1.00 62.85 C
ATOM 19 O6 G A2234 -60.090 128.162 167.835 1.00 77.53 O
ATOM 20 N1 G A2234 -59.331 129.599 166.251 1.00 67.37 N
ATOM 21 C2 G A2234 -58.325 130.219 165.542 1.00 79.48 C
ATOM 22 N2 G A2234 -58.702 131.107 164.610 1.00 90.59 N
ATOM 23 N3 G A2234 -57.030 129.993 165.729 1.00 84.08 N
ATOM 24 C4 G A2234 -56.809 129.075 166.698 1.00 73.68 C
ATOM 25 P G A2235 -50.358 128.792 164.147 1.00 53.83 P
ATOM 26 OP1 G A2235 -50.762 128.342 162.793 1.00 55.87 O
ATOM 27 OP2 G A2235 -49.816 127.865 165.173 1.00 40.72 O
ATOM 28 O5' G A2235 -49.289 129.948 163.845 1.00 57.51 O
TER
ATOM 1 O3' G B2479 -54.549 122.534 165.472 1.00 33.19 O
ATOM 2 P C B2480 -53.682 123.838 165.816 1.00 31.94 P
ATOM 3 OP1 C B2480 -54.476 125.017 165.413 1.00 47.73 O
ATOM 4 OP2 C B2480 -52.328 123.650 165.233 1.00 49.76 O
ATOM 5 O5' C B2480 -53.561 123.803 167.409 1.00 32.82 O
ATOM 6 C5' C B2480 -54.616 124.309 168.159 1.00 30.54 C
ATOM 7 C4' C B2480 -54.309 124.076 169.609 1.00 31.18 C
ATOM 8 O4' C B2480 -53.841 122.719 169.712 1.00 33.36 O
ATOM 9 C3' C B2480 -53.150 124.890 170.158 1.00 34.68 C
ATOM 10 O3' C B2480 -53.605 126.147 170.654 1.00 30.95 O
ATOM 11 C2' C B2480 -52.618 124.007 171.292 1.00 42.17 C
ATOM 12 O2' C B2480 -53.053 124.384 172.595 1.00 39.59 O
ATOM 13 C1' C B2480 -53.131 122.611 170.924 1.00 36.60 C
ATOM 14 N1 C B2480 -52.025 121.695 170.667 1.00 34.67 N
ATOM 15 C2 C B2480 -51.484 120.928 171.710 1.00 37.89 C
ATOM 16 O2 C B2480 -51.956 121.011 172.856 1.00 39.08 O
ATOM 17 N3 C B2480 -50.449 120.108 171.428 1.00 38.53 N
ATOM 18 C4 C B2480 -49.981 120.047 170.180 1.00 43.51 C
ATOM 19 N4 C B2480 -48.961 119.215 169.936 1.00 53.15 N
ATOM 20 C5 C B2480 -50.523 120.829 169.117 1.00 40.29 C
ATOM 21 C6 C B2480 -51.539 121.640 169.402 1.00 37.23 C
ATOM 22 P A B2481 -52.632 127.405 170.536 1.00 52.07 P
ATOM 23 OP1 A B2481 -53.306 128.607 171.095 1.00 49.36 O
ATOM 24 OP2 A B2481 -52.104 127.405 169.147 1.00 59.01 O
ATOM 25 O5' A B2481 -51.424 127.014 171.502 1.00 48.24 O
TER
Atoms:
OP1: (-56.388,132.088,161.588)
OP2: (-56.479,134.161,163.080)
C3': (-52.977,129.254,164.543)
C1': (-54.282,129.088,166.569)
C5': (-54.794,130.813,163.657)
O6: (-60.090,128.162,167.835)
O4': (-54.501,130.379,166.032)
C8: (-55.822,127.724,168.102)
C2: (-58.325,130.219,165.542)
C6: (-59.117,128.658,167.256)
C5: (-57.739,128.403,167.463)
C4: (-56.809,129.075,166.698)
P: (-55.748,132.964,162.592)
C4': (-53.806,130.517,164.762)
C2': (-53.675,128.231,165.450)
O2': (-52.780,127.267,165.974)
N1: (-59.331,129.599,166.251)
N2: (-58.702,131.107,164.610)
N3: (-57.030,129.993,165.729)
N7: (-57.099,127.551,168.353)
N9: (-55.569,128.636,167.102)
O5': (-55.355,132.084,163.872)
O3': (-51.588,129.529,164.871)
OP2: (-56.479,134.161,163.080)
C3': (-52.977,129.254,164.543)
C1': (-54.282,129.088,166.569)
C5': (-54.794,130.813,163.657)
O6: (-60.090,128.162,167.835)
O4': (-54.501,130.379,166.032)
C8: (-55.822,127.724,168.102)
C2: (-58.325,130.219,165.542)
C6: (-59.117,128.658,167.256)
C5: (-57.739,128.403,167.463)
C4: (-56.809,129.075,166.698)
P: (-55.748,132.964,162.592)
C4': (-53.806,130.517,164.762)
C2': (-53.675,128.231,165.450)
O2': (-52.780,127.267,165.974)
N1: (-59.331,129.599,166.251)
N2: (-58.702,131.107,164.610)
N3: (-57.030,129.993,165.729)
N7: (-57.099,127.551,168.353)
N9: (-55.569,128.636,167.102)
O5': (-55.355,132.084,163.872)
O3': (-51.588,129.529,164.871)
C2: (-51.484,120.928,171.710)
OP1: (-54.476,125.017,165.413)
OP2: (-52.328,123.650,165.233)
C4: (-49.981,120.047,170.180)
O5': (-53.561,123.803,167.409)
C3': (-53.150,124.890,170.158)
C1': (-53.131,122.611,170.924)
O4': (-53.841,122.719,169.712)
C5': (-54.616,124.309,168.159)
P: (-53.682,123.838,165.816)
O2: (-51.956,121.011,172.856)
C4': (-54.309,124.076,169.609)
C2': (-52.618,124.007,171.292)
O2': (-53.053,124.384,172.595)
N1: (-52.025,121.695,170.667)
N3: (-50.449,120.108,171.428)
N4: (-48.961,119.215,169.936)
C6: (-51.539,121.640,169.402)
C5: (-50.523,120.829,169.117)
O3': (-53.605,126.147,170.654)
OP1: (-54.476,125.017,165.413)
OP2: (-52.328,123.650,165.233)
C4: (-49.981,120.047,170.180)
O5': (-53.561,123.803,167.409)
C3': (-53.150,124.890,170.158)
C1': (-53.131,122.611,170.924)
O4': (-53.841,122.719,169.712)
C5': (-54.616,124.309,168.159)
P: (-53.682,123.838,165.816)
O2: (-51.956,121.011,172.856)
C4': (-54.309,124.076,169.609)
C2': (-52.618,124.007,171.292)
O2': (-53.053,124.384,172.595)
N1: (-52.025,121.695,170.667)
N3: (-50.449,120.108,171.428)
N4: (-48.961,119.215,169.936)
C6: (-51.539,121.640,169.402)
C5: (-50.523,120.829,169.117)
O3': (-53.605,126.147,170.654)
Image (generated by PyMOL):