Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2234:A2480
Extra
PDB:
ATOM 1 O3' U A2233 -107.396 -51.112 18.610 1.00 65.70 O
ATOM 2 P G A2234 -108.833 -51.687 18.150 1.00 69.34 P
ATOM 3 OP1 G A2234 -109.467 -50.642 17.312 1.00 61.89 O
ATOM 4 OP2 G A2234 -109.541 -52.209 19.335 1.00 73.54 O
ATOM 5 O5' G A2234 -108.499 -52.952 17.235 1.00 54.22 O
ATOM 6 C5' G A2234 -107.933 -52.694 15.969 1.00 57.01 C
ATOM 7 C4' G A2234 -106.959 -53.790 15.596 1.00 54.86 C
ATOM 8 O4' G A2234 -107.692 -55.026 15.419 1.00 62.19 O
ATOM 9 C3' G A2234 -106.165 -53.538 14.317 1.00 61.41 C
ATOM 10 O3' G A2234 -104.779 -53.877 14.546 1.00 66.59 O
ATOM 11 C2' G A2234 -106.873 -54.405 13.265 1.00 58.96 C
ATOM 12 O2' G A2234 -105.982 -54.922 12.284 1.00 48.36 O
ATOM 13 C1' G A2234 -107.528 -55.521 14.097 1.00 73.47 C
ATOM 14 N9 G A2234 -108.845 -56.004 13.646 1.00 80.02 N
ATOM 15 C8 G A2234 -109.139 -56.945 12.686 1.00 73.25 C
ATOM 16 N7 G A2234 -110.417 -57.156 12.529 1.00 64.69 N
ATOM 17 C5 G A2234 -111.014 -56.306 13.446 1.00 62.04 C
ATOM 18 C6 G A2234 -112.384 -56.084 13.747 1.00 70.87 C
ATOM 19 O6 G A2234 -113.392 -56.610 13.251 1.00 78.47 O
ATOM 20 N1 G A2234 -112.540 -55.126 14.748 1.00 75.87 N
ATOM 21 C2 G A2234 -111.500 -54.474 15.381 1.00 79.67 C
ATOM 22 N2 G A2234 -111.819 -53.581 16.328 1.00 83.03 N
ATOM 23 N3 G A2234 -110.223 -54.679 15.114 1.00 77.91 N
ATOM 24 C4 G A2234 -110.058 -55.600 14.140 1.00 72.85 C
ATOM 25 P G A2235 -103.535 -53.163 13.802 1.00 47.39 P
ATOM 26 OP1 G A2235 -103.949 -51.784 13.436 1.00 53.55 O
ATOM 27 OP2 G A2235 -103.067 -54.141 12.769 1.00 36.36 O
ATOM 28 O5' G A2235 -102.414 -52.957 14.943 1.00 44.42 O
TER
ATOM 1 O3' G B2479 -107.885 -54.178 7.568 1.00 46.72 O
ATOM 2 P C B2480 -106.986 -54.551 8.843 1.00 52.23 P
ATOM 3 OP1 C B2480 -107.747 -54.181 10.061 1.00 63.23 O
ATOM 4 OP2 C B2480 -105.605 -54.044 8.662 1.00 60.89 O
ATOM 5 O5' C B2480 -106.949 -56.153 8.760 1.00 62.13 O
ATOM 6 C5' C B2480 -108.033 -56.943 9.264 1.00 49.91 C
ATOM 7 C4' C B2480 -107.735 -58.395 8.992 1.00 47.37 C
ATOM 8 O4' C B2480 -107.345 -58.484 7.611 1.00 48.63 O
ATOM 9 C3' C B2480 -106.541 -58.964 9.744 1.00 45.98 C
ATOM 10 O3' C B2480 -106.951 -59.462 11.011 1.00 44.14 O
ATOM 11 C2' C B2480 -106.055 -60.074 8.805 1.00 53.63 C
ATOM 12 O2' C B2480 -106.516 -61.380 9.100 1.00 57.82 O
ATOM 13 C1' C B2480 -106.610 -59.673 7.445 1.00 53.17 C
ATOM 14 N1 C B2480 -105.523 -59.400 6.504 1.00 56.87 N
ATOM 15 C2 C B2480 -105.028 -60.428 5.691 1.00 55.81 C
ATOM 16 O2 C B2480 -105.510 -61.574 5.757 1.00 53.25 O
ATOM 17 N3 C B2480 -104.019 -60.114 4.845 1.00 55.83 N
ATOM 18 C4 C B2480 -103.526 -58.873 4.808 1.00 56.01 C
ATOM 19 N4 C B2480 -102.529 -58.620 3.960 1.00 64.77 N
ATOM 20 C5 C B2480 -104.019 -57.829 5.632 1.00 54.88 C
ATOM 21 C6 C B2480 -105.012 -58.136 6.461 1.00 54.91 C
ATOM 22 P A B2481 -105.977 -59.419 12.278 1.00 52.10 P
ATOM 23 OP1 A B2481 -106.640 -59.996 13.468 1.00 46.81 O
ATOM 24 OP2 A B2481 -105.417 -58.052 12.316 1.00 64.19 O
ATOM 25 O5' A B2481 -104.797 -60.410 11.858 1.00 56.89 O
TER
ATOM 2 P G A2234 -108.833 -51.687 18.150 1.00 69.34 P
ATOM 3 OP1 G A2234 -109.467 -50.642 17.312 1.00 61.89 O
ATOM 4 OP2 G A2234 -109.541 -52.209 19.335 1.00 73.54 O
ATOM 5 O5' G A2234 -108.499 -52.952 17.235 1.00 54.22 O
ATOM 6 C5' G A2234 -107.933 -52.694 15.969 1.00 57.01 C
ATOM 7 C4' G A2234 -106.959 -53.790 15.596 1.00 54.86 C
ATOM 8 O4' G A2234 -107.692 -55.026 15.419 1.00 62.19 O
ATOM 9 C3' G A2234 -106.165 -53.538 14.317 1.00 61.41 C
ATOM 10 O3' G A2234 -104.779 -53.877 14.546 1.00 66.59 O
ATOM 11 C2' G A2234 -106.873 -54.405 13.265 1.00 58.96 C
ATOM 12 O2' G A2234 -105.982 -54.922 12.284 1.00 48.36 O
ATOM 13 C1' G A2234 -107.528 -55.521 14.097 1.00 73.47 C
ATOM 14 N9 G A2234 -108.845 -56.004 13.646 1.00 80.02 N
ATOM 15 C8 G A2234 -109.139 -56.945 12.686 1.00 73.25 C
ATOM 16 N7 G A2234 -110.417 -57.156 12.529 1.00 64.69 N
ATOM 17 C5 G A2234 -111.014 -56.306 13.446 1.00 62.04 C
ATOM 18 C6 G A2234 -112.384 -56.084 13.747 1.00 70.87 C
ATOM 19 O6 G A2234 -113.392 -56.610 13.251 1.00 78.47 O
ATOM 20 N1 G A2234 -112.540 -55.126 14.748 1.00 75.87 N
ATOM 21 C2 G A2234 -111.500 -54.474 15.381 1.00 79.67 C
ATOM 22 N2 G A2234 -111.819 -53.581 16.328 1.00 83.03 N
ATOM 23 N3 G A2234 -110.223 -54.679 15.114 1.00 77.91 N
ATOM 24 C4 G A2234 -110.058 -55.600 14.140 1.00 72.85 C
ATOM 25 P G A2235 -103.535 -53.163 13.802 1.00 47.39 P
ATOM 26 OP1 G A2235 -103.949 -51.784 13.436 1.00 53.55 O
ATOM 27 OP2 G A2235 -103.067 -54.141 12.769 1.00 36.36 O
ATOM 28 O5' G A2235 -102.414 -52.957 14.943 1.00 44.42 O
TER
ATOM 1 O3' G B2479 -107.885 -54.178 7.568 1.00 46.72 O
ATOM 2 P C B2480 -106.986 -54.551 8.843 1.00 52.23 P
ATOM 3 OP1 C B2480 -107.747 -54.181 10.061 1.00 63.23 O
ATOM 4 OP2 C B2480 -105.605 -54.044 8.662 1.00 60.89 O
ATOM 5 O5' C B2480 -106.949 -56.153 8.760 1.00 62.13 O
ATOM 6 C5' C B2480 -108.033 -56.943 9.264 1.00 49.91 C
ATOM 7 C4' C B2480 -107.735 -58.395 8.992 1.00 47.37 C
ATOM 8 O4' C B2480 -107.345 -58.484 7.611 1.00 48.63 O
ATOM 9 C3' C B2480 -106.541 -58.964 9.744 1.00 45.98 C
ATOM 10 O3' C B2480 -106.951 -59.462 11.011 1.00 44.14 O
ATOM 11 C2' C B2480 -106.055 -60.074 8.805 1.00 53.63 C
ATOM 12 O2' C B2480 -106.516 -61.380 9.100 1.00 57.82 O
ATOM 13 C1' C B2480 -106.610 -59.673 7.445 1.00 53.17 C
ATOM 14 N1 C B2480 -105.523 -59.400 6.504 1.00 56.87 N
ATOM 15 C2 C B2480 -105.028 -60.428 5.691 1.00 55.81 C
ATOM 16 O2 C B2480 -105.510 -61.574 5.757 1.00 53.25 O
ATOM 17 N3 C B2480 -104.019 -60.114 4.845 1.00 55.83 N
ATOM 18 C4 C B2480 -103.526 -58.873 4.808 1.00 56.01 C
ATOM 19 N4 C B2480 -102.529 -58.620 3.960 1.00 64.77 N
ATOM 20 C5 C B2480 -104.019 -57.829 5.632 1.00 54.88 C
ATOM 21 C6 C B2480 -105.012 -58.136 6.461 1.00 54.91 C
ATOM 22 P A B2481 -105.977 -59.419 12.278 1.00 52.10 P
ATOM 23 OP1 A B2481 -106.640 -59.996 13.468 1.00 46.81 O
ATOM 24 OP2 A B2481 -105.417 -58.052 12.316 1.00 64.19 O
ATOM 25 O5' A B2481 -104.797 -60.410 11.858 1.00 56.89 O
TER
Atoms:
OP1: (-109.467,-50.642,17.312)
OP2: (-109.541,-52.209,19.335)
C3': (-106.165,-53.538,14.317)
C1': (-107.528,-55.521,14.097)
C5': (-107.933,-52.694,15.969)
O6: (-113.392,-56.610,13.251)
O4': (-107.692,-55.026,15.419)
C8: (-109.139,-56.945,12.686)
C2: (-111.500,-54.474,15.381)
C6: (-112.384,-56.084,13.747)
C5: (-111.014,-56.306,13.446)
C4: (-110.058,-55.600,14.140)
P: (-108.833,-51.687,18.150)
C4': (-106.959,-53.790,15.596)
C2': (-106.873,-54.405,13.265)
O2': (-105.982,-54.922,12.284)
N1: (-112.540,-55.126,14.748)
N2: (-111.819,-53.581,16.328)
N3: (-110.223,-54.679,15.114)
N7: (-110.417,-57.156,12.529)
N9: (-108.845,-56.004,13.646)
O5': (-108.499,-52.952,17.235)
O3': (-104.779,-53.877,14.546)
OP2: (-109.541,-52.209,19.335)
C3': (-106.165,-53.538,14.317)
C1': (-107.528,-55.521,14.097)
C5': (-107.933,-52.694,15.969)
O6: (-113.392,-56.610,13.251)
O4': (-107.692,-55.026,15.419)
C8: (-109.139,-56.945,12.686)
C2: (-111.500,-54.474,15.381)
C6: (-112.384,-56.084,13.747)
C5: (-111.014,-56.306,13.446)
C4: (-110.058,-55.600,14.140)
P: (-108.833,-51.687,18.150)
C4': (-106.959,-53.790,15.596)
C2': (-106.873,-54.405,13.265)
O2': (-105.982,-54.922,12.284)
N1: (-112.540,-55.126,14.748)
N2: (-111.819,-53.581,16.328)
N3: (-110.223,-54.679,15.114)
N7: (-110.417,-57.156,12.529)
N9: (-108.845,-56.004,13.646)
O5': (-108.499,-52.952,17.235)
O3': (-104.779,-53.877,14.546)
C2: (-105.028,-60.428,5.691)
OP1: (-107.747,-54.181,10.061)
OP2: (-105.605,-54.044,8.662)
C4: (-103.526,-58.873,4.808)
O5': (-106.949,-56.153,8.760)
C3': (-106.541,-58.964,9.744)
C1': (-106.610,-59.673,7.445)
O4': (-107.345,-58.484,7.611)
C5': (-108.033,-56.943,9.264)
P: (-106.986,-54.551,8.843)
O2: (-105.510,-61.574,5.757)
C4': (-107.735,-58.395,8.992)
C2': (-106.055,-60.074,8.805)
O2': (-106.516,-61.380,9.100)
N1: (-105.523,-59.400,6.504)
N3: (-104.019,-60.114,4.845)
N4: (-102.529,-58.620,3.960)
C6: (-105.012,-58.136,6.461)
C5: (-104.019,-57.829,5.632)
O3': (-106.951,-59.462,11.011)
OP1: (-107.747,-54.181,10.061)
OP2: (-105.605,-54.044,8.662)
C4: (-103.526,-58.873,4.808)
O5': (-106.949,-56.153,8.760)
C3': (-106.541,-58.964,9.744)
C1': (-106.610,-59.673,7.445)
O4': (-107.345,-58.484,7.611)
C5': (-108.033,-56.943,9.264)
P: (-106.986,-54.551,8.843)
O2: (-105.510,-61.574,5.757)
C4': (-107.735,-58.395,8.992)
C2': (-106.055,-60.074,8.805)
O2': (-106.516,-61.380,9.100)
N1: (-105.523,-59.400,6.504)
N3: (-104.019,-60.114,4.845)
N4: (-102.529,-58.620,3.960)
C6: (-105.012,-58.136,6.461)
C5: (-104.019,-57.829,5.632)
O3': (-106.951,-59.462,11.011)
Image (generated by PyMOL):